Click here to switch to the map view.

The map label for this gene is msrB [H]

Identifier: 169628145

GI number: 169628145

Start: 1058009

End: 1058539

Strand: Reverse

Name: msrB [H]

Synonym: MAB_1050c

Alternate gene names: 169628145

Gene position: 1058539-1058009 (Counterclockwise)

Preceding gene: 169628146

Following gene: 169628143

Centisome position: 20.89

GC content: 64.22

Gene sequence:

>531_bases
ATGCGGCGCTGGTCGCCTTCGGCCGCTGACCCGGCCCTTACCCGACGGCAATTGCTCGTCGGCGTGGTCGCCGTGTGCGC
CCTGGCGTGCTTGGACAGGTATGACAGCGCGGCGGCAGATCCTTCGACGCCATCCGCACCCGTTCCATCGATCGTCCACA
CCGACGCCGAATGGCGCCAGCTACTAACCCCCAGCCAGTACCAGATTCTCCGCAAGGCAGGCACCGAAACCCCGTACAGC
AGCCCACTGAACAATGAGCACCGAACCGGCGTCTTCAGTTGCGCCGGTTGCGCGTTGGACCTCTTCTCGTCGGCGGCCAA
GTTCGACAGCGGCACCGGGTGGCCGAGCTTTTGGCAACCATTGCCGCATGCCGTGTCCGAAAGACCAGACAACAGCCTGG
GGATGAGTCGTACCGAGGTGTTCTGCAGCCGGTGTGCGGGACATCTGGGCCATGTGTTCGACGACGGGCCCAAACCGACC
GGGCTGCGCTATTGCATGAACGGTGCCGCGATGAACTTCCGTCCCACGTAA

Upstream 100 bases:

>100_bases
CTCCACCGACACCCTGGTACGCCACTACCGCAACGCGCGAGGCAGAACCACGTAACCGCGAGGTCTTTGCAGCGCGTCGC
AGGCGGCCTACTCTGGCGCT

Downstream 100 bases:

>100_bases
TCGCTAGGTCGCGGCGACGATCACCACAAGCGCCGGGGTCTCGGACGTCCGGCGTATCCGGTGGGTGCGGGTGGCATCGA
GATAAGCGCTATCCCCTTCA

Product: putative methionine sulfoxide reductase

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase [H]

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MRRWSPSAADPALTRRQLLVGVVAVCALACLDRYDSAAADPSTPSAPVPSIVHTDAEWRQLLTPSQYQILRKAGTETPYS
SPLNNEHRTGVFSCAGCALDLFSSAAKFDSGTGWPSFWQPLPHAVSERPDNSLGMSRTEVFCSRCAGHLGHVFDDGPKPT
GLRYCMNGAAMNFRPT

Sequences:

>Translated_176_residues
MRRWSPSAADPALTRRQLLVGVVAVCALACLDRYDSAAADPSTPSAPVPSIVHTDAEWRQLLTPSQYQILRKAGTETPYS
SPLNNEHRTGVFSCAGCALDLFSSAAKFDSGTGWPSFWQPLPHAVSERPDNSLGMSRTEVFCSRCAGHLGHVFDDGPKPT
GLRYCMNGAAMNFRPT
>Mature_176_residues
MRRWSPSAADPALTRRQLLVGVVAVCALACLDRYDSAAADPSTPSAPVPSIVHTDAEWRQLLTPSQYQILRKAGTETPYS
SPLNNEHRTGVFSCAGCALDLFSSAAKFDSGTGWPSFWQPLPHAVSERPDNSLGMSRTEVFCSRCAGHLGHVFDDGPKPT
GLRYCMNGAAMNFRPT

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI301336164, Length=126, Percent_Identity=45.2380952380952, Blast_Score=128, Evalue=3e-30,
Organism=Homo sapiens, GI301336162, Length=126, Percent_Identity=45.2380952380952, Blast_Score=128, Evalue=3e-30,
Organism=Homo sapiens, GI73089054, Length=126, Percent_Identity=45.2380952380952, Blast_Score=128, Evalue=3e-30,
Organism=Homo sapiens, GI37620216, Length=126, Percent_Identity=45.2380952380952, Blast_Score=127, Evalue=4e-30,
Organism=Homo sapiens, GI117606353, Length=129, Percent_Identity=44.9612403100775, Blast_Score=120, Evalue=8e-28,
Organism=Escherichia coli, GI1788077, Length=118, Percent_Identity=44.0677966101695, Blast_Score=112, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17553450, Length=122, Percent_Identity=43.4426229508197, Blast_Score=108, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI115532676, Length=122, Percent_Identity=43.4426229508197, Blast_Score=108, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6319816, Length=128, Percent_Identity=41.40625, Blast_Score=106, Evalue=2e-24,
Organism=Drosophila melanogaster, GI221378664, Length=119, Percent_Identity=50.4201680672269, Blast_Score=127, Evalue=4e-30,
Organism=Drosophila melanogaster, GI221378662, Length=126, Percent_Identity=47.6190476190476, Blast_Score=126, Evalue=9e-30,
Organism=Drosophila melanogaster, GI45553335, Length=119, Percent_Identity=49.5798319327731, Blast_Score=124, Evalue=4e-29,
Organism=Drosophila melanogaster, GI21356369, Length=119, Percent_Identity=49.5798319327731, Blast_Score=124, Evalue=4e-29,
Organism=Drosophila melanogaster, GI24645799, Length=119, Percent_Identity=49.5798319327731, Blast_Score=124, Evalue=4e-29,
Organism=Drosophila melanogaster, GI24645801, Length=154, Percent_Identity=41.5584415584416, Blast_Score=119, Evalue=9e-28,
Organism=Drosophila melanogaster, GI24645804, Length=130, Percent_Identity=44.6153846153846, Blast_Score=119, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 19056; Mature: 19056

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRWSPSAADPALTRRQLLVGVVAVCALACLDRYDSAAADPSTPSAPVPSIVHTDAEWRQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHHH
LLTPSQYQILRKAGTETPYSSPLNNEHRTGVFSCAGCALDLFSSAAKFDSGTGWPSFWQP
HCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
LPHAVSERPDNSLGMSRTEVFCSRCAGHLGHVFDDGPKPTGLRYCMNGAAMNFRPT
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRRWSPSAADPALTRRQLLVGVVAVCALACLDRYDSAAADPSTPSAPVPSIVHTDAEWRQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHHH
LLTPSQYQILRKAGTETPYSSPLNNEHRTGVFSCAGCALDLFSSAAKFDSGTGWPSFWQP
HCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
LPHAVSERPDNSLGMSRTEVFCSRCAGHLGHVFDDGPKPTGLRYCMNGAAMNFRPT
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]