| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is mpb63 [H]
Identifier: 169628121
GI number: 169628121
Start: 1036283
End: 1037215
Strand: Reverse
Name: mpb63 [H]
Synonym: MAB_1026c
Alternate gene names: 169628121
Gene position: 1037215-1036283 (Counterclockwise)
Preceding gene: 169628123
Following gene: 169628118
Centisome position: 20.47
GC content: 73.95
Gene sequence:
>933_bases GTGAAGATCAATGTGCCCATTACCGCCGCCGTCGCGGCCGCCGCGGCGGCTGCGGGACTGGCCCTCATGCCCACCGCCGG CGCCGACACTACGCTCGGGCAGCAGGGGCGGCTGACCAACGGCGACGTCGTGCAGGCGTGGACCATCAGCGACCTGAAGG TCAGCACCGACCAGTTGCCTTACCAGCCCAAGGGCACCCTGTGGGAGGCCACCGCCACCGACGAGGCCATCCAGGGCAGC GTCATCCCGATCGTCGCCAACTTCAACGCCAAGGCCAACGACGGCGAGACCTACCGGGTGCTGTACGGCGTCGCGAGCGC GCAGGGCGTGAACCCGGGCACCTTGTCGCAGGGCGAGAAGACCACCGGCAAGATCTACTTCGACGTGACCGGCGCCAATC CGGAGACGGTGACCTACACCTCCGGTGACGAGGATCTGCTTACCTGGAAGGCCGCTCCGGCCGCCGCCCCCGCGCAGCGC TCGGGTGGTTCGACCCAGTCGCACGGCTCCACCCCCGCGCCGGCCACCAGCACCGCGCCCACCACCGCCACCCCGGCGCC CGCCGCGGTTCCCGCCGGCAGCCAGGGCACCCCGCTGCCCGCCGGCAGCCAGGGCACCCCGGTGGACGAGCAGGCGCCCG CGGCCACCCCGACGCCGACCGTGGCGCCGGTGACCGCCACCCCGACCCCGGCGCCGGCCACTCCCACGCCGGGCGCCGAA GGCACGCCGTTGAACAGCACCGCAGTGCCCGCCTCGCCGGCGCCCGCGACTGCTACACCGGCCGTTCCCGTTCCTGAGGG TGCCGCCCCGCAGACGGGCACCCCGCCGGTCGCCGCGGTACCCGGAGTCCCCGCGGTGCCGGCGTCCGACAGCGTTCCGC ACGGGCAGCGTGCAGCGGGAAGCCAGGGAACACCCGTTTCCACCGAAGGCTGA
Upstream 100 bases:
>100_bases TCGTGAACTTCGGGCGACGATGGTGCACCCAGACCTGTTAGTTTTACCGACAGACCGTCCCCGCTGGGGGGAGCAATTCG GACGTCAAGGAGATCGCATC
Downstream 100 bases:
>100_bases GTAAGACCGTCTTGGCATTGACCGCCGGCCGCCATGTGCGGCCGGCGGTTTTTGTTATGAGTGCGAAGACCACCACGCGT ACAGCTGGTCCAGCGTGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: 16 kDa immunoprotective extracellular protein; Antigen MPB63 [H]
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MKINVPITAAVAAAAAAAGLALMPTAGADTTLGQQGRLTNGDVVQAWTISDLKVSTDQLPYQPKGTLWEATATDEAIQGS VIPIVANFNAKANDGETYRVLYGVASAQGVNPGTLSQGEKTTGKIYFDVTGANPETVTYTSGDEDLLTWKAAPAAAPAQR SGGSTQSHGSTPAPATSTAPTTATPAPAAVPAGSQGTPLPAGSQGTPVDEQAPAATPTPTVAPVTATPTPAPATPTPGAE GTPLNSTAVPASPAPATATPAVPVPEGAAPQTGTPPVAAVPGVPAVPASDSVPHGQRAAGSQGTPVSTEG
Sequences:
>Translated_310_residues MKINVPITAAVAAAAAAAGLALMPTAGADTTLGQQGRLTNGDVVQAWTISDLKVSTDQLPYQPKGTLWEATATDEAIQGS VIPIVANFNAKANDGETYRVLYGVASAQGVNPGTLSQGEKTTGKIYFDVTGANPETVTYTSGDEDLLTWKAAPAAAPAQR SGGSTQSHGSTPAPATSTAPTTATPAPAAVPAGSQGTPLPAGSQGTPVDEQAPAATPTPTVAPVTATPTPAPATPTPGAE GTPLNSTAVPASPAPATATPAVPVPEGAAPQTGTPPVAAVPGVPAVPASDSVPHGQRAAGSQGTPVSTEG >Mature_310_residues MKINVPITAAVAAAAAAAGLALMPTAGADTTLGQQGRLTNGDVVQAWTISDLKVSTDQLPYQPKGTLWEATATDEAIQGS VIPIVANFNAKANDGETYRVLYGVASAQGVNPGTLSQGEKTTGKIYFDVTGANPETVTYTSGDEDLLTWKAAPAAAPAQR SGGSTQSHGSTPAPATSTAPTTATPAPAAVPAGSQGTPLPAGSQGTPVDEQAPAATPTPTVAPVTATPTPAPATPTPGAE GTPLNSTAVPASPAPATATPAVPVPEGAAPQTGTPPVAAVPGVPAVPASDSVPHGQRAAGSQGTPVSTEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015250 - ProDom: PD886639 [H]
Pfam domain/function: PF09167 DUF1942 [H]
EC number: NA
Molecular weight: Translated: 30151; Mature: 30151
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKINVPITAAVAAAAAAAGLALMPTAGADTTLGQQGRLTNGDVVQAWTISDLKVSTDQLP CEECCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCEEECCCCCC YQPKGTLWEATATDEAIQGSVIPIVANFNAKANDGETYRVLYGVASAQGVNPGTLSQGEK CCCCCCEEECCCCCHHHCCCEEEEEEECCCCCCCCCEEEEEEEEHHCCCCCCCCCCCCCC TTGKIYFDVTGANPETVTYTSGDEDLLTWKAAPAAAPAQRSGGSTQSHGSTPAPATSTAP CCCEEEEEEECCCCCEEEECCCCCCEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCC TTATPAPAAVPAGSQGTPLPAGSQGTPVDEQAPAATPTPTVAPVTATPTPAPATPTPGAE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC GTPLNSTAVPASPAPATATPAVPVPEGAAPQTGTPPVAAVPGVPAVPASDSVPHGQRAAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC SQGTPVSTEG CCCCCCCCCC >Mature Secondary Structure MKINVPITAAVAAAAAAAGLALMPTAGADTTLGQQGRLTNGDVVQAWTISDLKVSTDQLP CEECCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCEEECCCCCC YQPKGTLWEATATDEAIQGSVIPIVANFNAKANDGETYRVLYGVASAQGVNPGTLSQGEK CCCCCCEEECCCCCHHHCCCEEEEEEECCCCCCCCCEEEEEEEEHHCCCCCCCCCCCCCC TTGKIYFDVTGANPETVTYTSGDEDLLTWKAAPAAAPAQRSGGSTQSHGSTPAPATSTAP CCCEEEEEEECCCCCEEEECCCCCCEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCC TTATPAPAAVPAGSQGTPLPAGSQGTPVDEQAPAATPTPTVAPVTATPTPAPATPTPGAE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC GTPLNSTAVPASPAPATATPAVPVPEGAAPQTGTPPVAAVPGVPAVPASDSVPHGQRAAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC SQGTPVSTEG CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]