| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628118
Identifier: 169628118
GI number: 169628118
Start: 1033437
End: 1034546
Strand: Reverse
Name: 169628118
Synonym: MAB_1023c
Alternate gene names: NA
Gene position: 1034546-1033437 (Counterclockwise)
Preceding gene: 169628121
Following gene: 169628114
Centisome position: 20.42
GC content: 62.61
Gene sequence:
>1110_bases ATGACGGAGGATGCAATGACGCATGTACTGCCGCGCGACACCGAACGTGATGACCACGCCGAGGAGCACGAGGACGGGCT CGCGTACTTGCGCTCGGAGGGGGTGCGCCCGCACGTCATGGACGCGTTTCGCAAGCATTTGGGCAGCCCTCTCGTCGGCG TCTTCGGCGGAGTGCTGTTCGATGAGGTGGCCTTGGTGCCGGTGGCAGCATCCGTCGACCGTTCAGGGCGGTTCCGGGAG AACTTCACCGACCGCGGCATCCGGAGCGCCCTCAGCGCGATATCGGTATTCGCCGGAGACCGGCAACAACGGGCCGACAC GGCACAGTGGCTCAAGGAGCAACATCGCGCGGTCCGTGGCACCGGTGTCGGCGAGTACGAAGGAATCCGTTACAGCGCGT TGGATCCCGAGCTGTGGATCTGGATCGCGGCCAGCGCCATCAACGCCACCATGGAGGCCTTTCCCCACTGCACGGGCTAC ACGCTGACCGCAACGGAGAAAGAGGCCGCGTATCAGTACCAGCGGTATCTACTCAAGGACCTGGAATTGCCCAGCGCCAA AGGTAAATTCCCCCCGACGTATGCCGCCTTCACCGACTACTACGACGACATGGTGGAGAACAGATTGCAGTCCAATGGTT TCCTGCGGGACCAATTCGCCGGATTGATGCGTCTACCGCTGCCGACGCTGCTACTGCCCACCGCCTTGCGTCCCGCCCTG TTTCCACTCTGGCTCGCGATTCGCCCGATAGCGGGCCGGGTGATCCAGGTGTGCTCCGCCACGGCGATGCATCCGCAGAT ACGCGAGATGATCGGGTTCGAGCTCAAACGCCGCCATACACTCGAATTCGCGCTGTACACCCGGGTGCTGCAGTTGGTAT GGCGCGTGACGCCGGAACGACTGCTCATAGAACCCATGCTGTACAACACCATTCGAATCGACAACGCTCGGGCACAACTC GATAGTTCACCTGCCGCCCAACGCAGGTATGACAAATTGGCCCGATCCTTGACGCGCCGCAATGCGCGCTTGGCGAACTT CTACCACGGCTATCGCCTCGACAGCTTCGCCGCTCCGGAACGGCCGACAGGAGCCTGCCCGTTCGGGTGA
Upstream 100 bases:
>100_bases TCGCCGGTGGGATCCGGATCTGCAGACACATCTCAGTCTCTCACGCAGAAACACTTCCCAAACCAATGTTGCGATGTTAG CTTCTAGATAAGTTCATAAC
Downstream 100 bases:
>100_bases ACAGCTAACTACCCGCCGCTCGAACCGAAGACGCTACGGACGTGCTGGGCTCCGGCGTCAGGCCGGGCAGCGGGATCCGC GCTGCCTGCGGCACACCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MTEDAMTHVLPRDTERDDHAEEHEDGLAYLRSEGVRPHVMDAFRKHLGSPLVGVFGGVLFDEVALVPVAASVDRSGRFRE NFTDRGIRSALSAISVFAGDRQQRADTAQWLKEQHRAVRGTGVGEYEGIRYSALDPELWIWIAASAINATMEAFPHCTGY TLTATEKEAAYQYQRYLLKDLELPSAKGKFPPTYAAFTDYYDDMVENRLQSNGFLRDQFAGLMRLPLPTLLLPTALRPAL FPLWLAIRPIAGRVIQVCSATAMHPQIREMIGFELKRRHTLEFALYTRVLQLVWRVTPERLLIEPMLYNTIRIDNARAQL DSSPAAQRRYDKLARSLTRRNARLANFYHGYRLDSFAAPERPTGACPFG
Sequences:
>Translated_369_residues MTEDAMTHVLPRDTERDDHAEEHEDGLAYLRSEGVRPHVMDAFRKHLGSPLVGVFGGVLFDEVALVPVAASVDRSGRFRE NFTDRGIRSALSAISVFAGDRQQRADTAQWLKEQHRAVRGTGVGEYEGIRYSALDPELWIWIAASAINATMEAFPHCTGY TLTATEKEAAYQYQRYLLKDLELPSAKGKFPPTYAAFTDYYDDMVENRLQSNGFLRDQFAGLMRLPLPTLLLPTALRPAL FPLWLAIRPIAGRVIQVCSATAMHPQIREMIGFELKRRHTLEFALYTRVLQLVWRVTPERLLIEPMLYNTIRIDNARAQL DSSPAAQRRYDKLARSLTRRNARLANFYHGYRLDSFAAPERPTGACPFG >Mature_368_residues TEDAMTHVLPRDTERDDHAEEHEDGLAYLRSEGVRPHVMDAFRKHLGSPLVGVFGGVLFDEVALVPVAASVDRSGRFREN FTDRGIRSALSAISVFAGDRQQRADTAQWLKEQHRAVRGTGVGEYEGIRYSALDPELWIWIAASAINATMEAFPHCTGYT LTATEKEAAYQYQRYLLKDLELPSAKGKFPPTYAAFTDYYDDMVENRLQSNGFLRDQFAGLMRLPLPTLLLPTALRPALF PLWLAIRPIAGRVIQVCSATAMHPQIREMIGFELKRRHTLEFALYTRVLQLVWRVTPERLLIEPMLYNTIRIDNARAQLD SSPAAQRRYDKLARSLTRRNARLANFYHGYRLDSFAAPERPTGACPFG
Specific function: Unknown
COG id: COG3662
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41859; Mature: 41728
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEDAMTHVLPRDTERDDHAEEHEDGLAYLRSEGVRPHVMDAFRKHLGSPLVGVFGGVLF CCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH DEVALVPVAASVDRSGRFRENFTDRGIRSALSAISVFAGDRQQRADTAQWLKEQHRAVRG HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC TGVGEYEGIRYSALDPELWIWIAASAINATMEAFPHCTGYTLTATEKEAAYQYQRYLLKD CCCCCCCCCEEECCCCCEEEEEHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHH LELPSAKGKFPPTYAAFTDYYDDMVENRLQSNGFLRDQFAGLMRLPLPTLLLPTALRPAL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHH FPLWLAIRPIAGRVIQVCSATAMHPQIREMIGFELKRRHTLEFALYTRVLQLVWRVTPER HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LLIEPMLYNTIRIDNARAQLDSSPAAQRRYDKLARSLTRRNARLANFYHGYRLDSFAAPE HHHHHHHHHHEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC RPTGACPFG CCCCCCCCC >Mature Secondary Structure TEDAMTHVLPRDTERDDHAEEHEDGLAYLRSEGVRPHVMDAFRKHLGSPLVGVFGGVLF CCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH DEVALVPVAASVDRSGRFRENFTDRGIRSALSAISVFAGDRQQRADTAQWLKEQHRAVRG HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC TGVGEYEGIRYSALDPELWIWIAASAINATMEAFPHCTGYTLTATEKEAAYQYQRYLLKD CCCCCCCCCEEECCCCCEEEEEHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHH LELPSAKGKFPPTYAAFTDYYDDMVENRLQSNGFLRDQFAGLMRLPLPTLLLPTALRPAL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHH FPLWLAIRPIAGRVIQVCSATAMHPQIREMIGFELKRRHTLEFALYTRVLQLVWRVTPER HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LLIEPMLYNTIRIDNARAQLDSSPAAQRRYDKLARSLTRRNARLANFYHGYRLDSFAAPE HHHHHHHHHHEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC RPTGACPFG CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA