| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628110
Identifier: 169628110
GI number: 169628110
Start: 1023679
End: 1024293
Strand: Reverse
Name: 169628110
Synonym: MAB_1015c
Alternate gene names: NA
Gene position: 1024293-1023679 (Counterclockwise)
Preceding gene: 169628111
Following gene: 169628109
Centisome position: 20.21
GC content: 60.98
Gene sequence:
>615_bases ATGAGCTTCAGTGACGCGAAGGAGACACCTGTTACCGAGGACTCGCCCGTCGCGCCCAGCCCGGAACCCAAACCGCGGCG GCGACGGATTCTGTTGGTGTGCATCACCGTCACGGTCCTGCTCGCCGGTTTCATCACCGCAGGGTGGCGGGTGTACATGA ATCCGCAGACCGACCCGTTGCGACCGGCCGACGCCATCGTCGTCCTGGGCGGCACCCCGTACGAGCGTTTCGATGTCGGC CTGGACCTGGCTAAACGGGGGTATGCACCGTACCTGTTGATCTCGCAGTCGACCGGCGCCGACGACCGCAACATGGACAA ATACTGCAAGGGCCATTTCACGTTCACGGTGAGCTGTTTCATCCCAGATCCGTGGACCACTGAGGGCGAGGCGCAGGAAA TACGTTCCAAGGCACAGGAATTAGGTTGGCATCACATCATCGTGATCACTTTCACCCCGCATGTTTCGCGAGCTCGTTAC ATCGTCGGAAAGTGCTTCGACGGGGAACTCACCATGGTCGCCAGTCCCGCACCTTCCGGCGTTGCCTTCTGGTCGTGGAT GTTCATCCGCCAGTCCGGCAGCTACGTCAAGGCCTTCCTGACCCTCGGATGCTGA
Upstream 100 bases:
>100_bases GCCCGCCATCCCGCACAGGCCGCCAAGATCGCGGAGGCCGGCCATGCTCGGGTGACCCAGGACGCACACCGCTACGTCGA CCGGGCCAGGGAGATCATCG
Downstream 100 bases:
>100_bases GGAGCATGTTATGAGCACATCGCGTGTCGCCATCGTCCACGAACGTTTCACCGAGTTCGGCGGCTCGGAGCTGGTGGTCG CCGAGTTCATGAAGACCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MSFSDAKETPVTEDSPVAPSPEPKPRRRRILLVCITVTVLLAGFITAGWRVYMNPQTDPLRPADAIVVLGGTPYERFDVG LDLAKRGYAPYLLISQSTGADDRNMDKYCKGHFTFTVSCFIPDPWTTEGEAQEIRSKAQELGWHHIIVITFTPHVSRARY IVGKCFDGELTMVASPAPSGVAFWSWMFIRQSGSYVKAFLTLGC
Sequences:
>Translated_204_residues MSFSDAKETPVTEDSPVAPSPEPKPRRRRILLVCITVTVLLAGFITAGWRVYMNPQTDPLRPADAIVVLGGTPYERFDVG LDLAKRGYAPYLLISQSTGADDRNMDKYCKGHFTFTVSCFIPDPWTTEGEAQEIRSKAQELGWHHIIVITFTPHVSRARY IVGKCFDGELTMVASPAPSGVAFWSWMFIRQSGSYVKAFLTLGC >Mature_203_residues SFSDAKETPVTEDSPVAPSPEPKPRRRRILLVCITVTVLLAGFITAGWRVYMNPQTDPLRPADAIVVLGGTPYERFDVGL DLAKRGYAPYLLISQSTGADDRNMDKYCKGHFTFTVSCFIPDPWTTEGEAQEIRSKAQELGWHHIIVITFTPHVSRARYI VGKCFDGELTMVASPAPSGVAFWSWMFIRQSGSYVKAFLTLGC
Specific function: Unknown
COG id: COG1434
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22695; Mature: 22564
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFSDAKETPVTEDSPVAPSPEPKPRRRRILLVCITVTVLLAGFITAGWRVYMNPQTDPL CCCCCCCCCCCCCCCCCCCCCCCCHHHHEEEEHHHHHHHHHHHHHHCCEEEEECCCCCCC RPADAIVVLGGTPYERFDVGLDLAKRGYAPYLLISQSTGADDRNMDKYCKGHFTFTVSCF CCCCEEEEECCCCHHHHHCCHHHHHCCCCCEEEEECCCCCCCCCCHHHHCCEEEEEEEEE IPDPWTTEGEAQEIRSKAQELGWHHIIVITFTPHVSRARYIVGKCFDGELTMVASPAPSG ECCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEEEECCCEEEEECCCCCC VAFWSWMFIRQSGSYVKAFLTLGC HHHHEEEEECCCCCEEEEEEEECC >Mature Secondary Structure SFSDAKETPVTEDSPVAPSPEPKPRRRRILLVCITVTVLLAGFITAGWRVYMNPQTDPL CCCCCCCCCCCCCCCCCCCCCCCHHHHEEEEHHHHHHHHHHHHHHCCEEEEECCCCCCC RPADAIVVLGGTPYERFDVGLDLAKRGYAPYLLISQSTGADDRNMDKYCKGHFTFTVSCF CCCCEEEEECCCCHHHHHCCHHHHHCCCCCEEEEECCCCCCCCCCHHHHCCEEEEEEEEE IPDPWTTEGEAQEIRSKAQELGWHHIIVITFTPHVSRARYIVGKCFDGELTMVASPAPSG ECCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEEEECCCEEEEECCCCCC VAFWSWMFIRQSGSYVKAFLTLGC HHHHEEEEECCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA