| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628109
Identifier: 169628109
GI number: 169628109
Start: 1022523
End: 1023668
Strand: Reverse
Name: 169628109
Synonym: MAB_1014c
Alternate gene names: NA
Gene position: 1023668-1022523 (Counterclockwise)
Preceding gene: 169628110
Following gene: 169628107
Centisome position: 20.2
GC content: 68.32
Gene sequence:
>1146_bases ATGAGCACATCGCGTGTCGCCATCGTCCACGAACGTTTCACCGAGTTCGGCGGCTCGGAGCTGGTGGTCGCCGAGTTCAT GAAGACCTGGCCGCAGGCCAAGGTCTTCGCTCCCATCACCGAACCGCATTGCCGCCGGCAGGTGATGCATGCCGCAGGCC GAACCGAAGGCGCACCGCACGAACCCATTTCCGGAACCTGGCTGGACGACGCGTATGCCCTCACCGGACGCAGGTCGCAC GCACCACTGCTGCCCCTGGTACCCGGCGCCCTCGGGAAGCTTCCGCTTGGCGACGACGTCGACGCGGTGCTGATCAGCCA TCACTCGTTCGCGACCCAGGCAGCCTTCGCCACCGAAGCCCCCGTTGTCGCATACGTGCACAGTCCCGCCCGCTGGGCCT GGGATCGCACCTTCCGCGACCACGAGATGGCAAGTCGAGCGGGCCGGATCGCCCTGTCCGCGTTGGGTAAGCTCGCACGC CGCGGCGAGCTGCGCGCCGCACCGCGCCTGTCGCACGTCATCGCGAACTCACACGCCGTGGCCGAGCGGATACGTGACTG GTGGGGACTGCCGTCGACGGTGATCAGCCCACCGGTGCGTATCGACCGCTTCTCGCCCGACCCATCGATCCGGCGCGAGG ACTTCTATCTGTGCGCGGGCAGACTGGTGCCTTACAAGCGTGCGGACCTTGCCATCCGGGCCGCGCAGCGGGCCAACTGC CGCCTGGTGGTGTTGGGGGAAGGACGGTTCCGTGAACACCTTGAAGACATCGCGGGGCCCGAGACCACGTTCCTGGGCGC CGCCTCCGACGACGTGCTCCTGGACATGTACCGGCGGTGCCGCGCCCTGCTGATGCCGGGAGTAGAGGACTTCGGCATCG TCCCGGTCGAGGCGATGGCATGCGGGACACCGGTTCTCGCACTGGGCGAGGGCGGCGCCCTGGACACGGTGACACCCGGA ATCACCGGTGAGCACATGCGGGCCGGCCCCGATGACGCGGTTGTGGAACAGCTGGCCGCGCTGATGCGTGACTTCGACCC GGCCGACTACGACGCCGGCACAATCCGGGCACGAGCGTGCGAGTTCTCGCCCGAGGCATTTCGTGCCCGGATCGCCGAAA CCGTGCAGGGTGCCGTGCGCGCCTAG
Upstream 100 bases:
>100_bases CCCGCACCTTCCGGCGTTGCCTTCTGGTCGTGGATGTTCATCCGCCAGTCCGGCAGCTACGTCAAGGCCTTCCTGACCCT CGGATGCTGAGGAGCATGTT
Downstream 100 bases:
>100_bases TCGCCGGCTGAGTGCTTGCCTCCACCGGCACCGGATCCGCCATGCGAACCCGAACCATCCGAACCACCACCGGCATTCGA TCCGCTCGAGCCGCCACCGG
Product: glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MSTSRVAIVHERFTEFGGSELVVAEFMKTWPQAKVFAPITEPHCRRQVMHAAGRTEGAPHEPISGTWLDDAYALTGRRSH APLLPLVPGALGKLPLGDDVDAVLISHHSFATQAAFATEAPVVAYVHSPARWAWDRTFRDHEMASRAGRIALSALGKLAR RGELRAAPRLSHVIANSHAVAERIRDWWGLPSTVISPPVRIDRFSPDPSIRREDFYLCAGRLVPYKRADLAIRAAQRANC RLVVLGEGRFREHLEDIAGPETTFLGAASDDVLLDMYRRCRALLMPGVEDFGIVPVEAMACGTPVLALGEGGALDTVTPG ITGEHMRAGPDDAVVEQLAALMRDFDPADYDAGTIRARACEFSPEAFRARIAETVQGAVRA
Sequences:
>Translated_381_residues MSTSRVAIVHERFTEFGGSELVVAEFMKTWPQAKVFAPITEPHCRRQVMHAAGRTEGAPHEPISGTWLDDAYALTGRRSH APLLPLVPGALGKLPLGDDVDAVLISHHSFATQAAFATEAPVVAYVHSPARWAWDRTFRDHEMASRAGRIALSALGKLAR RGELRAAPRLSHVIANSHAVAERIRDWWGLPSTVISPPVRIDRFSPDPSIRREDFYLCAGRLVPYKRADLAIRAAQRANC RLVVLGEGRFREHLEDIAGPETTFLGAASDDVLLDMYRRCRALLMPGVEDFGIVPVEAMACGTPVLALGEGGALDTVTPG ITGEHMRAGPDDAVVEQLAALMRDFDPADYDAGTIRARACEFSPEAFRARIAETVQGAVRA >Mature_380_residues STSRVAIVHERFTEFGGSELVVAEFMKTWPQAKVFAPITEPHCRRQVMHAAGRTEGAPHEPISGTWLDDAYALTGRRSHA PLLPLVPGALGKLPLGDDVDAVLISHHSFATQAAFATEAPVVAYVHSPARWAWDRTFRDHEMASRAGRIALSALGKLARR GELRAAPRLSHVIANSHAVAERIRDWWGLPSTVISPPVRIDRFSPDPSIRREDFYLCAGRLVPYKRADLAIRAAQRANCR LVVLGEGRFREHLEDIAGPETTFLGAASDDVLLDMYRRCRALLMPGVEDFGIVPVEAMACGTPVLALGEGGALDTVTPGI TGEHMRAGPDDAVVEQLAALMRDFDPADYDAGTIRARACEFSPEAFRARIAETVQGAVRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 41521; Mature: 41390
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSRVAIVHERFTEFGGSELVVAEFMKTWPQAKVFAPITEPHCRRQVMHAAGRTEGAPH CCCCEEEHHHHHHHHCCCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCCCC EPISGTWLDDAYALTGRRSHAPLLPLVPGALGKLPLGDDVDAVLISHHSFATQAAFATEA CCCCCCCCCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCC PVVAYVHSPARWAWDRTFRDHEMASRAGRIALSALGKLARRGELRAAPRLSHVIANSHAV CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH AERIRDWWGLPSTVISPPVRIDRFSPDPSIRREDFYLCAGRLVPYKRADLAIRAAQRANC HHHHHHHHCCCHHHCCCCCEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCC RLVVLGEGRFREHLEDIAGPETTFLGAASDDVLLDMYRRCRALLMPGVEDFGIVPVEAMA EEEEECCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH CGTPVLALGEGGALDTVTPGITGEHMRAGPDDAVVEQLAALMRDFDPADYDAGTIRARAC CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEE EFSPEAFRARIAETVQGAVRA CCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure STSRVAIVHERFTEFGGSELVVAEFMKTWPQAKVFAPITEPHCRRQVMHAAGRTEGAPH CCCEEEHHHHHHHHCCCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCCCC EPISGTWLDDAYALTGRRSHAPLLPLVPGALGKLPLGDDVDAVLISHHSFATQAAFATEA CCCCCCCCCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCC PVVAYVHSPARWAWDRTFRDHEMASRAGRIALSALGKLARRGELRAAPRLSHVIANSHAV CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH AERIRDWWGLPSTVISPPVRIDRFSPDPSIRREDFYLCAGRLVPYKRADLAIRAAQRANC HHHHHHHHCCCHHHCCCCCEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCC RLVVLGEGRFREHLEDIAGPETTFLGAASDDVLLDMYRRCRALLMPGVEDFGIVPVEAMA EEEEECCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH CGTPVLALGEGGALDTVTPGITGEHMRAGPDDAVVEQLAALMRDFDPADYDAGTIRARAC CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEE EFSPEAFRARIAETVQGAVRA CCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]