Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

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The map label for this gene is 169627974

Identifier: 169627974

GI number: 169627974

Start: 871169

End: 872836

Strand: Reverse

Name: 169627974

Synonym: MAB_0875c

Alternate gene names: NA

Gene position: 872836-871169 (Counterclockwise)

Preceding gene: 169627976

Following gene: 169627973

Centisome position: 17.23

GC content: 68.05

Gene sequence:

>1668_bases
GTGCGGGACGACTACGCGCGGTTCGGGAACCGCCACGGCAGTAGCGACTCCCCGTCTCGCCGCCGCAACCAGGATCCGCG
CGATGCCAACTCCCACCCGGGTATGGCCAACTACCCGACGGGCAGCGCCCCGCGGGAACGCCTGCGCGCAAGCAGCTCAT
CGAATCGCTATCTCCCCCCGCTCGGCGAGGAGCGCCGTGAGCGGGTGCGCCGCCGGCCCCCGCCCGAGCAGGACCACCCG
CAGAAACTGACGGTCACCCGGGTTGCCGCGATGCGCAGCCGCGAGATGGGCTCCCGGATGTACGGGCTGTTCCAGAAGGC
CGCCACCGCGGACGGCGCCGATAAGTCGGGCCTCACCGCCCTCACGTATCCGGTGATGGCCAACTTCGCGGTGGACGCCG
CGATGGCGGTAGCCCTTGCCAACACACTCTTCTTCGCCGCCGCCACCGCCGAGTCCAAGAGCAAGGTGGCGCTGTATCTG
CTGATCACCATCGCACCGTTCGCCGTCATCGCCCCGCTGATCGGCCCCGCGCTGGACCGCCTGCAACATGGACGCCGGGC
CGCACTGGCCGCTTCATTTGGATTGCGCACCTTGTTGGCCGTGATCATGATCGCCAACTACGACGGCGCCAGCGGCAGCT
TCCCGCCCTGGGTGCTGTATCCCTGTGCGTTGTCAATGCTGGTGCTGTCCAAGTCCTTTGGCGTGCTGCGCGGTGCGGTG
ACGCCACGTGTACTGCCCCCGACCATCGACCTGGTGCGTGTCAACTCGCGGCTCACCACCTTTGGCCTGGTCGGCGGAAC
CATTGTCGGTGGAGCCATCGCGGCCGGTTGCGAGCTCGCGTTCACCCGGTTATTGCACCTGCCCGGTGCGCTTTTCGTGG
TCATCGCGGTCACCGCGGTGGGTGCCTGGGCCTCGATGCGCATCCCCAAGTGGGTGGAGGTAACCGCCGGTGAGGTGCCC
ACCACCTTCGGCTATCACGGCGACGACGGCGAGCACCCGACGATTCTGCTACGGCGCTCCCATAAGCAGCCGGAGAAGGT
CCGGCAGCCGCTGGGCCGCAACATCATCACCTCGCTCTGGGGCAACAGCACCATCAAGGTGATGGTCGGATTCCTCACCC
TGTACCCGGCATTCGTCGCCAAATCTCACGATGCCCACGGCTTCCAGCAGCTCGCCATGCTGGGCATGGTCGGTGCGGCC
GCCGGTATCGGCAACTTCGCGGGCAACGCCACCAGTGCCCGACTCAAGCTCGGCCGCCCCGCCCTGCTCGTGGTGCGCTG
CGCCAGCGCGGTGACGGTGGTGGCGCTGGCCGCCGCCGTGACCGGAGTCCTGGCGGTGGTGGTGGTCGCGACGCTGGTGA
CATCGGCGGTCAGCGCCATCGCGAAGGCCTCGCTGGACGCCTCGTTGCAGGATGATCTGCCGGAAGAATCCCGCGCGTCC
GCGTTCGGGCGGTCCGAGGCACTGCTGCAGCTGTCCTGGGTGCTCGGTGGCGCGATCGGCGTGATGATCTACACCGACCT
ATGGGTGGGATTCACGGTGATCTCGGCCGTGCTCATCCTCGGCCTGGCCCAGACGCTGGCCAGCTTCCGCGGCGTCTCCC
TGATTCCGGGTCTGGGCGGCAACCGCCCGGTGATGGCCGAACAAGAAGGTGGCAAGGTACACGCGTGA

Upstream 100 bases:

>100_bases
GGCCGTACGTGCCTGCTCAATACACGTGTACAGGGCGTCGCGGCCGGAGATAGTGATGTCCATCGCTGACCATCTTCTCA
CCGTGAGGGACAATCGATGC

Downstream 100 bases:

>100_bases
AAGCGAAACTGACGGCGCTGGCCGTCGTCCTGGTGCTCACCGCTGCCGCCATGGTCGGGTTTATCACCTGGCGGGTACGC
GGGCACCAGGAGGAGCGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 555; Mature: 555

Protein sequence:

>555_residues
MRDDYARFGNRHGSSDSPSRRRNQDPRDANSHPGMANYPTGSAPRERLRASSSSNRYLPPLGEERRERVRRRPPPEQDHP
QKLTVTRVAAMRSREMGSRMYGLFQKAATADGADKSGLTALTYPVMANFAVDAAMAVALANTLFFAAATAESKSKVALYL
LITIAPFAVIAPLIGPALDRLQHGRRAALAASFGLRTLLAVIMIANYDGASGSFPPWVLYPCALSMLVLSKSFGVLRGAV
TPRVLPPTIDLVRVNSRLTTFGLVGGTIVGGAIAAGCELAFTRLLHLPGALFVVIAVTAVGAWASMRIPKWVEVTAGEVP
TTFGYHGDDGEHPTILLRRSHKQPEKVRQPLGRNIITSLWGNSTIKVMVGFLTLYPAFVAKSHDAHGFQQLAMLGMVGAA
AGIGNFAGNATSARLKLGRPALLVVRCASAVTVVALAAAVTGVLAVVVVATLVTSAVSAIAKASLDASLQDDLPEESRAS
AFGRSEALLQLSWVLGGAIGVMIYTDLWVGFTVISAVLILGLAQTLASFRGVSLIPGLGGNRPVMAEQEGGKVHA

Sequences:

>Translated_555_residues
MRDDYARFGNRHGSSDSPSRRRNQDPRDANSHPGMANYPTGSAPRERLRASSSSNRYLPPLGEERRERVRRRPPPEQDHP
QKLTVTRVAAMRSREMGSRMYGLFQKAATADGADKSGLTALTYPVMANFAVDAAMAVALANTLFFAAATAESKSKVALYL
LITIAPFAVIAPLIGPALDRLQHGRRAALAASFGLRTLLAVIMIANYDGASGSFPPWVLYPCALSMLVLSKSFGVLRGAV
TPRVLPPTIDLVRVNSRLTTFGLVGGTIVGGAIAAGCELAFTRLLHLPGALFVVIAVTAVGAWASMRIPKWVEVTAGEVP
TTFGYHGDDGEHPTILLRRSHKQPEKVRQPLGRNIITSLWGNSTIKVMVGFLTLYPAFVAKSHDAHGFQQLAMLGMVGAA
AGIGNFAGNATSARLKLGRPALLVVRCASAVTVVALAAAVTGVLAVVVVATLVTSAVSAIAKASLDASLQDDLPEESRAS
AFGRSEALLQLSWVLGGAIGVMIYTDLWVGFTVISAVLILGLAQTLASFRGVSLIPGLGGNRPVMAEQEGGKVHA
>Mature_555_residues
MRDDYARFGNRHGSSDSPSRRRNQDPRDANSHPGMANYPTGSAPRERLRASSSSNRYLPPLGEERRERVRRRPPPEQDHP
QKLTVTRVAAMRSREMGSRMYGLFQKAATADGADKSGLTALTYPVMANFAVDAAMAVALANTLFFAAATAESKSKVALYL
LITIAPFAVIAPLIGPALDRLQHGRRAALAASFGLRTLLAVIMIANYDGASGSFPPWVLYPCALSMLVLSKSFGVLRGAV
TPRVLPPTIDLVRVNSRLTTFGLVGGTIVGGAIAAGCELAFTRLLHLPGALFVVIAVTAVGAWASMRIPKWVEVTAGEVP
TTFGYHGDDGEHPTILLRRSHKQPEKVRQPLGRNIITSLWGNSTIKVMVGFLTLYPAFVAKSHDAHGFQQLAMLGMVGAA
AGIGNFAGNATSARLKLGRPALLVVRCASAVTVVALAAAVTGVLAVVVVATLVTSAVSAIAKASLDASLQDDLPEESRAS
AFGRSEALLQLSWVLGGAIGVMIYTDLWVGFTVISAVLILGLAQTLASFRGVSLIPGLGGNRPVMAEQEGGKVHA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML2143 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 58643; Mature: 58643

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDDYARFGNRHGSSDSPSRRRNQDPRDANSHPGMANYPTGSAPRERLRASSSSNRYLPP
CCCCHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCC
LGEERRERVRRRPPPEQDHPQKLTVTRVAAMRSREMGSRMYGLFQKAATADGADKSGLTA
CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
LTYPVMANFAVDAAMAVALANTLFFAAATAESKSKVALYLLITIAPFAVIAPLIGPALDR
EHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
LQHGRRAALAASFGLRTLLAVIMIANYDGASGSFPPWVLYPCALSMLVLSKSFGVLRGAV
HHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
TPRVLPPTIDLVRVNSRLTTFGLVGGTIVGGAIAAGCELAFTRLLHLPGALFVVIAVTAV
CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
GAWASMRIPKWVEVTAGEVPTTFGYHGDDGEHPTILLRRSHKQPEKVRQPLGRNIITSLW
HHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHC
GNSTIKVMVGFLTLYPAFVAKSHDAHGFQQLAMLGMVGAAAGIGNFAGNATSARLKLGRP
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCC
ALLVVRCASAVTVVALAAAVTGVLAVVVVATLVTSAVSAIAKASLDASLQDDLPEESRAS
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHH
AFGRSEALLQLSWVLGGAIGVMIYTDLWVGFTVISAVLILGLAQTLASFRGVSLIPGLGG
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCC
NRPVMAEQEGGKVHA
CCCEEECCCCCCCCC
>Mature Secondary Structure
MRDDYARFGNRHGSSDSPSRRRNQDPRDANSHPGMANYPTGSAPRERLRASSSSNRYLPP
CCCCHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCC
LGEERRERVRRRPPPEQDHPQKLTVTRVAAMRSREMGSRMYGLFQKAATADGADKSGLTA
CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
LTYPVMANFAVDAAMAVALANTLFFAAATAESKSKVALYLLITIAPFAVIAPLIGPALDR
EHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
LQHGRRAALAASFGLRTLLAVIMIANYDGASGSFPPWVLYPCALSMLVLSKSFGVLRGAV
HHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
TPRVLPPTIDLVRVNSRLTTFGLVGGTIVGGAIAAGCELAFTRLLHLPGALFVVIAVTAV
CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
GAWASMRIPKWVEVTAGEVPTTFGYHGDDGEHPTILLRRSHKQPEKVRQPLGRNIITSLW
HHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHC
GNSTIKVMVGFLTLYPAFVAKSHDAHGFQQLAMLGMVGAAAGIGNFAGNATSARLKLGRP
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCC
ALLVVRCASAVTVVALAAAVTGVLAVVVVATLVTSAVSAIAKASLDASLQDDLPEESRAS
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHH
AFGRSEALLQLSWVLGGAIGVMIYTDLWVGFTVISAVLILGLAQTLASFRGVSLIPGLGG
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCC
NRPVMAEQEGGKVHA
CCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]