| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627973
Identifier: 169627973
GI number: 169627973
Start: 870669
End: 871172
Strand: Reverse
Name: 169627973
Synonym: MAB_0874c
Alternate gene names: NA
Gene position: 871172-870669 (Counterclockwise)
Preceding gene: 169627974
Following gene: 169627970
Centisome position: 17.19
GC content: 64.48
Gene sequence:
>504_bases GTGAAAGCGAAACTGACGGCGCTGGCCGTCGTCCTGGTGCTCACCGCTGCCGCCATGGTCGGGTTTATCACCTGGCGGGT ACGCGGGCACCAGGAGGAGCGACCGGAGATCAGCGCGTTCACCCATGGCACCGTGATCCATGCCGCGCCCTACCAGTACT GCGACAAAAACAAGCTGGACCAGTGCGACCCGCTGGGACACACCGTTCAATTGGCTGTCAATGCCCATGATCCCGTACAG CTTTCGGTTGACGGGCGGATCGCCAGGGCGCCATGGATGCTGTCCCGGATCTACGCGCCGACAGGCGACGTCGACCACAA GCGGGCGGAATCCAGTGTGTACCGCGACCACCGGACCGCCGTGACGATACCCACGATCGACGGTGAGGGCCGTCGGCTGC TGGGGCTGGAAATCAAGCTGCCCACGGTGGTTCAGACCGAGACCGGCGACCTGCTGGAAGTGACCCATGCCGTGTGGTCG GTCGCGACGGTCTGGAAGGACTAG
Upstream 100 bases:
>100_bases TGGCCCAGACGCTGGCCAGCTTCCGCGGCGTCTCCCTGATTCCGGGTCTGGGCGGCAACCGCCCGGTGATGGCCGAACAA GAAGGTGGCAAGGTACACGC
Downstream 100 bases:
>100_bases CGCGCAGCGCGATACCTCGCGCGCACCCCGGCGTCCAGATGCTCGGTGGCATAACTGAGCGCCGTGCGGCCCATGGCGGC GGCATGCTCATCCAGATAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MKAKLTALAVVLVLTAAAMVGFITWRVRGHQEERPEISAFTHGTVIHAAPYQYCDKNKLDQCDPLGHTVQLAVNAHDPVQ LSVDGRIARAPWMLSRIYAPTGDVDHKRAESSVYRDHRTAVTIPTIDGEGRRLLGLEIKLPTVVQTETGDLLEVTHAVWS VATVWKD
Sequences:
>Translated_167_residues MKAKLTALAVVLVLTAAAMVGFITWRVRGHQEERPEISAFTHGTVIHAAPYQYCDKNKLDQCDPLGHTVQLAVNAHDPVQ LSVDGRIARAPWMLSRIYAPTGDVDHKRAESSVYRDHRTAVTIPTIDGEGRRLLGLEIKLPTVVQTETGDLLEVTHAVWS VATVWKD >Mature_167_residues MKAKLTALAVVLVLTAAAMVGFITWRVRGHQEERPEISAFTHGTVIHAAPYQYCDKNKLDQCDPLGHTVQLAVNAHDPVQ LSVDGRIARAPWMLSRIYAPTGDVDHKRAESSVYRDHRTAVTIPTIDGEGRRLLGLEIKLPTVVQTETGDLLEVTHAVWS VATVWKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18470; Mature: 18470
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAKLTALAVVLVLTAAAMVGFITWRVRGHQEERPEISAFTHGTVIHAAPYQYCDKNKLD CCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEECCEEEEECCCHHCCCCCCC QCDPLGHTVQLAVNAHDPVQLSVDGRIARAPWMLSRIYAPTGDVDHKRAESSVYRDHRTA CCCCCCCEEEEEEECCCCEEEEECCEEECCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCE VTIPTIDGEGRRLLGLEIKLPTVVQTETGDLLEVTHAVWSVATVWKD EEEECCCCCCCEEEEEEEECCEEEECCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKAKLTALAVVLVLTAAAMVGFITWRVRGHQEERPEISAFTHGTVIHAAPYQYCDKNKLD CCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEECCEEEEECCCHHCCCCCCC QCDPLGHTVQLAVNAHDPVQLSVDGRIARAPWMLSRIYAPTGDVDHKRAESSVYRDHRTA CCCCCCCEEEEEEECCCCEEEEECCEEECCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCE VTIPTIDGEGRRLLGLEIKLPTVVQTETGDLLEVTHAVWSVATVWKD EEEECCCCCCCEEEEEEEECCEEEECCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]