| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627936
Identifier: 169627936
GI number: 169627936
Start: 832154
End: 833308
Strand: Reverse
Name: 169627936
Synonym: MAB_0837c
Alternate gene names: NA
Gene position: 833308-832154 (Counterclockwise)
Preceding gene: 169627937
Following gene: 169627935
Centisome position: 16.45
GC content: 66.23
Gene sequence:
>1155_bases ATGAGCCGCGGTGTCGCCGTCGTCGGTGTCGGGCAAAGCAAGCAAGCCAAAAAACGTGAGGTGACCATCGCCGCGCTGGT CCGCGAAGCGGTGGACGGGGCGCTGGCCGACGCCGAGCTGACCTTCGGCGACATAGACGCGATCGTGCTGGCCAAGACAC CCGATCTATTCGACGGCGTCATGAACCCGGAGCTGTACCTCGCCGACGCGATCGGCGCGCGGGGTCTGCCGGTCACGCGC GTATTCACCGGTGGCAGCGTCGGCGGTCACGCCGCCATCTACGCCGCGCACCTGATCCAGGCCCGGCTGGCCGGACGGGT ATTGGTGGTCGCATATTCCAAAGAGTCCGAGGGCAATTTCACGTGGGCACTGTCACGTCCGTTGCCATTCAGTGCCCAGT TGGGAGCGGGCGCCGGCGGCCACTTCGCACCGGTGATCCGGGAGTACATCCGCCGCTCGCACGCACCGGAACATATCGGC TGGCAGGTGGCGGTGAATCACCGCCTCAACGCCACCCGGAACCCCTACGCGCATATCCACAAACCCGATATCACCATCGA GGAGGTGCGCAACTCCCCGATGCTGTGGGACCCGATCCGATTCCTGGAGTCGTGCCCGTCCTCGGATGGCTCATGTGCCG TCGTGATTTCTTCGGAGATGCATGCGCGGCTCGCTCCCCGACCGCCGGCCTGGATTCATGGCACCGGATGGCGCACCGAA ACAGGACATTTCGCGGGCCGAGACGAAGTGAACCCGCGCGCCGGACAGGAGTGCGCCGCCGCCGCGTATCGCGAGGCGGG CATCACCGATCCCGGCACCGAAGTGGATGTCTCCGAGCTCTACATTCCCTACAGCTGGTATGAGCCGATGTGGATGGAGA ACATCGGTCTGGCACCGGAGAGTTCGGGCTGGCGCGCCGTCGATGAGGGCCACACCGCATTCGGGGGCCGGCACCCGATC AACCCGTCCGGAGGCGTGCTCTCCGGCAATCCGACCGGTGCCACCGGCCTACTCCGATTCGCCGAGGCCGCCCTGCAGGT GCGGGGGCTCGCGGGTGAACACCAGGTCGATGGAGCCAGACGTGCGATAGGCCACGCCATGGGCGGGGCGTCACAGTTCC ACGCGTTGTGGGTGGTGGGAAGTGAGAAACCATGA
Upstream 100 bases:
>100_bases CCCGCACCATCATGCAGGGACGCGCCACCCGCGCACTGGCGCACGCTACCAATGGCCCTGCACTGCAGCACAACCTGGTG TGCTTGATGGAAACAAGCGC
Downstream 100 bases:
>100_bases GCGCAGCACGAGAACTCCTTGTCGAACGCGACGGGCCGGTCGTTATCCTGACGATGAACCGCCCGCACCGGAGAAATGCC CTGTCCACCAACATGGTCAG
Product: acetyl-CoA acetyltransferase
Products: CoA; 3-oxoacyl-CoA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MSRGVAVVGVGQSKQAKKREVTIAALVREAVDGALADAELTFGDIDAIVLAKTPDLFDGVMNPELYLADAIGARGLPVTR VFTGGSVGGHAAIYAAHLIQARLAGRVLVVAYSKESEGNFTWALSRPLPFSAQLGAGAGGHFAPVIREYIRRSHAPEHIG WQVAVNHRLNATRNPYAHIHKPDITIEEVRNSPMLWDPIRFLESCPSSDGSCAVVISSEMHARLAPRPPAWIHGTGWRTE TGHFAGRDEVNPRAGQECAAAAYREAGITDPGTEVDVSELYIPYSWYEPMWMENIGLAPESSGWRAVDEGHTAFGGRHPI NPSGGVLSGNPTGATGLLRFAEAALQVRGLAGEHQVDGARRAIGHAMGGASQFHALWVVGSEKP
Sequences:
>Translated_384_residues MSRGVAVVGVGQSKQAKKREVTIAALVREAVDGALADAELTFGDIDAIVLAKTPDLFDGVMNPELYLADAIGARGLPVTR VFTGGSVGGHAAIYAAHLIQARLAGRVLVVAYSKESEGNFTWALSRPLPFSAQLGAGAGGHFAPVIREYIRRSHAPEHIG WQVAVNHRLNATRNPYAHIHKPDITIEEVRNSPMLWDPIRFLESCPSSDGSCAVVISSEMHARLAPRPPAWIHGTGWRTE TGHFAGRDEVNPRAGQECAAAAYREAGITDPGTEVDVSELYIPYSWYEPMWMENIGLAPESSGWRAVDEGHTAFGGRHPI NPSGGVLSGNPTGATGLLRFAEAALQVRGLAGEHQVDGARRAIGHAMGGASQFHALWVVGSEKP >Mature_383_residues SRGVAVVGVGQSKQAKKREVTIAALVREAVDGALADAELTFGDIDAIVLAKTPDLFDGVMNPELYLADAIGARGLPVTRV FTGGSVGGHAAIYAAHLIQARLAGRVLVVAYSKESEGNFTWALSRPLPFSAQLGAGAGGHFAPVIREYIRRSHAPEHIGW QVAVNHRLNATRNPYAHIHKPDITIEEVRNSPMLWDPIRFLESCPSSDGSCAVVISSEMHARLAPRPPAWIHGTGWRTET GHFAGRDEVNPRAGQECAAAAYREAGITDPGTEVDVSELYIPYSWYEPMWMENIGLAPESSGWRAVDEGHTAFGGRHPIN PSGGVLSGNPTGATGLLRFAEAALQVRGLAGEHQVDGARRAIGHAMGGASQFHALWVVGSEKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI19923233, Length=392, Percent_Identity=30.1020408163265, Blast_Score=138, Evalue=9e-33, Organism=Homo sapiens, GI302344760, Length=322, Percent_Identity=30.7453416149068, Blast_Score=126, Evalue=4e-29, Organism=Homo sapiens, GI302344767, Length=317, Percent_Identity=30.9148264984227, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI302344762, Length=289, Percent_Identity=30.7958477508651, Blast_Score=109, Evalue=4e-24, Organism=Homo sapiens, GI55956775, Length=257, Percent_Identity=28.7937743190661, Blast_Score=82, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17537653, Length=395, Percent_Identity=26.5822784810127, Blast_Score=115, Evalue=4e-26, Organism=Drosophila melanogaster, GI24585051, Length=407, Percent_Identity=28.5012285012285, Blast_Score=126, Evalue=3e-29, Organism=Drosophila melanogaster, GI19921506, Length=407, Percent_Identity=27.5184275184275, Blast_Score=120, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020617 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: 2.3.1.16
Molecular weight: Translated: 40975; Mature: 40843
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRGVAVVGVGQSKQAKKREVTIAALVREAVDGALADAELTFGDIDAIVLAKTPDLFDGV CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHCCCEEEECCCCEEEEECCCHHHHHC MNPELYLADAIGARGLPVTRVFTGGSVGGHAAIYAAHLIQARLAGRVLVVAYSKESEGNF CCCCEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCE TWALSRPLPFSAQLGAGAGGHFAPVIREYIRRSHAPEHIGWQVAVNHRLNATRNPYAHIH EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEE KPDITIEEVRNSPMLWDPIRFLESCPSSDGSCAVVISSEMHARLAPRPPAWIHGTGWRTE CCCCCHHHHCCCCCEEHHHHHHHHCCCCCCCEEEEEECCCHHCCCCCCCCEEECCCCCCC TGHFAGRDEVNPRAGQECAAAAYREAGITDPGTEVDVSELYIPYSWYEPMWMENIGLAPE CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHEEEEECCCCCHHHHHCCCCCC SSGWRAVDEGHTAFGGRHPINPSGGVLSGNPTGATGLLRFAEAALQVRGLAGEHQVDGAR CCCCEEECCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHH RAIGHAMGGASQFHALWVVGSEKP HHHHHHHCCCCCEEEEEEEECCCC >Mature Secondary Structure SRGVAVVGVGQSKQAKKREVTIAALVREAVDGALADAELTFGDIDAIVLAKTPDLFDGV CCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCHHCCCEEEECCCCEEEEECCCHHHHHC MNPELYLADAIGARGLPVTRVFTGGSVGGHAAIYAAHLIQARLAGRVLVVAYSKESEGNF CCCCEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCE TWALSRPLPFSAQLGAGAGGHFAPVIREYIRRSHAPEHIGWQVAVNHRLNATRNPYAHIH EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEE KPDITIEEVRNSPMLWDPIRFLESCPSSDGSCAVVISSEMHARLAPRPPAWIHGTGWRTE CCCCCHHHHCCCCCEEHHHHHHHHCCCCCCCEEEEEECCCHHCCCCCCCCEEECCCCCCC TGHFAGRDEVNPRAGQECAAAAYREAGITDPGTEVDVSELYIPYSWYEPMWMENIGLAPE CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHEEEEECCCCCHHHHHCCCCCC SSGWRAVDEGHTAFGGRHPINPSGGVLSGNPTGATGLLRFAEAALQVRGLAGEHQVDGAR CCCCEEECCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHH RAIGHAMGGASQFHALWVVGSEKP HHHHHHHCCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acyl-CoA; acetyl-CoA
Specific reaction: acyl-CoA + acetyl-CoA = CoA + 3-oxoacyl-CoA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]