| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169627896
Identifier: 169627896
GI number: 169627896
Start: 786939
End: 787736
Strand: Reverse
Name: 169627896
Synonym: MAB_0796c
Alternate gene names: NA
Gene position: 787736-786939 (Counterclockwise)
Preceding gene: 169627897
Following gene: 169627884
Centisome position: 15.55
GC content: 69.8
Gene sequence:
>798_bases ATGGGCTGGATAGACCGACTGCGCGGGCGGGAGCGGCCGTCCACCGGAGACGCGGCGTCGGCGGACGTCGGTGTCCCGGA CCTCGCCGAACCCGTCTACGCGCGTGCGCTCGTGCTCCAAGTTGATCACGACGCGGCGATCATCGAGGTCCAGCCGCCGG GCCGAGCCTCCTTCCGAGCGGAACTGCGCAGCGGCACGGATCCAGAGAGCTTCACCGGACTGGTCATCCGCTGGCACGCC CCAGTGATCATCGACGGGGCCGATCCGAAACGCGTGATCCTGCTCGAACCACCGTGCGGCCCGGATCTGCCGCTCGTGCC AGATGATCTGCAGGCGATCCGAGACGCCCGGGACCTGCGCACGAGCGCCTTGGCGGCACTGTACCCGCCGCCCTCCGCCG CCGAACTGGCCAACCTGATGACACCGACCGCGTCGGCGGCGCACCCGGCCTGGGACGCCGTCTGCTACCGGCTCGGCCTG CTGACGACGCCCGAGGCCCAGGCCATCCTCGATCACATCCGCCGTGACGGAAACGCCTGGGTTCGAGCAGAAGCCGAGCT GTACTCCTGGGGCCCGAGCATCCCCGACGATCTACGCAAGCAGGTCGGGGCGTTCCTGTCGCATCTGCATGATGTCGCCC CGCAGGGCCGCGGTATCGATCGCGGGCCGTTCTGGACACTCGGCGTCGCGGCCCTGATGCGCGACCTCGCCCCCAACGAC GTCGACGCCCGAGTCTTCGAACTGGTGATGGGTCCGTTCGTCGACGTCTGCGGCCCGCTGCCGGAGCAGCTGCTGTAG
Upstream 100 bases:
>100_bases TGGGCGCTGCTGCTCGACTGGCGAGAACCCGAGGCCCCGGCATACCCGATGCGCAATGCGCTCGTGATCCCCGTCGACCA GGCACAGGGGTGAGAAGCGC
Downstream 100 bases:
>100_bases CGCGTTGCTCGGTTCACAGCGTTGGGAAGCCCTCCGGTTCTCCCCGGCAGGGCGCGAGCCAGGACAGTCGCCGGTCGCAG CCCACATCGACCATGCTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MGWIDRLRGRERPSTGDAASADVGVPDLAEPVYARALVLQVDHDAAIIEVQPPGRASFRAELRSGTDPESFTGLVIRWHA PVIIDGADPKRVILLEPPCGPDLPLVPDDLQAIRDARDLRTSALAALYPPPSAAELANLMTPTASAAHPAWDAVCYRLGL LTTPEAQAILDHIRRDGNAWVRAEAELYSWGPSIPDDLRKQVGAFLSHLHDVAPQGRGIDRGPFWTLGVAALMRDLAPND VDARVFELVMGPFVDVCGPLPEQLL
Sequences:
>Translated_265_residues MGWIDRLRGRERPSTGDAASADVGVPDLAEPVYARALVLQVDHDAAIIEVQPPGRASFRAELRSGTDPESFTGLVIRWHA PVIIDGADPKRVILLEPPCGPDLPLVPDDLQAIRDARDLRTSALAALYPPPSAAELANLMTPTASAAHPAWDAVCYRLGL LTTPEAQAILDHIRRDGNAWVRAEAELYSWGPSIPDDLRKQVGAFLSHLHDVAPQGRGIDRGPFWTLGVAALMRDLAPND VDARVFELVMGPFVDVCGPLPEQLL >Mature_264_residues GWIDRLRGRERPSTGDAASADVGVPDLAEPVYARALVLQVDHDAAIIEVQPPGRASFRAELRSGTDPESFTGLVIRWHAP VIIDGADPKRVILLEPPCGPDLPLVPDDLQAIRDARDLRTSALAALYPPPSAAELANLMTPTASAAHPAWDAVCYRLGLL TTPEAQAILDHIRRDGNAWVRAEAELYSWGPSIPDDLRKQVGAFLSHLHDVAPQGRGIDRGPFWTLGVAALMRDLAPNDV DARVFELVMGPFVDVCGPLPEQLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28668; Mature: 28537
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWIDRLRGRERPSTGDAASADVGVPDLAEPVYARALVLQVDHDAAIIEVQPPGRASFRA CCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHEEEEEEECCCEEEEEECCCCCHHHHH ELRSGTDPESFTGLVIRWHAPVIIDGADPKRVILLEPPCGPDLPLVPDDLQAIRDARDLR HHHCCCCCCHHCEEEEEEECCEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHH TSALAALYPPPSAAELANLMTPTASAAHPAWDAVCYRLGLLTTPEAQAILDHIRRDGNAW HHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEE VRAEAELYSWGPSIPDDLRKQVGAFLSHLHDVAPQGRGIDRGPFWTLGVAALMRDLAPND EEECHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCC VDARVFELVMGPFVDVCGPLPEQLL HHHHHHHHHHHHHHHHHCCCHHHCC >Mature Secondary Structure GWIDRLRGRERPSTGDAASADVGVPDLAEPVYARALVLQVDHDAAIIEVQPPGRASFRA CHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHEEEEEEECCCEEEEEECCCCCHHHHH ELRSGTDPESFTGLVIRWHAPVIIDGADPKRVILLEPPCGPDLPLVPDDLQAIRDARDLR HHHCCCCCCHHCEEEEEEECCEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHH TSALAALYPPPSAAELANLMTPTASAAHPAWDAVCYRLGLLTTPEAQAILDHIRRDGNAW HHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEE VRAEAELYSWGPSIPDDLRKQVGAFLSHLHDVAPQGRGIDRGPFWTLGVAALMRDLAPND EEECHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCC VDARVFELVMGPFVDVCGPLPEQLL HHHHHHHHHHHHHHHHHCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA