| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627897
Identifier: 169627897
GI number: 169627897
Start: 787744
End: 788499
Strand: Reverse
Name: 169627897
Synonym: MAB_0797c
Alternate gene names: NA
Gene position: 788499-787744 (Counterclockwise)
Preceding gene: 169627898
Following gene: 169627896
Centisome position: 15.56
GC content: 67.86
Gene sequence:
>756_bases GTGAGTCCGACTGAGCTTCGGCCCTGGCCCGCCGATCCCGTGTCCGCATGGGCGCAGGCAGTCGCTGCCCCAGCGGCGAA GTCACGGTATGGCGAGCGGCCGTCGATCAGGCCGTTGGAGGAGATTGCGGCTGACGTGCGCGGGCAGCGGGTGTTCGTGC CGGCGGTCGCCCTGGTGTTCACCGTAGTTGGTGCGATTCTCGTCGGTGGCCTGCTGGTCGGGGTGTTCCCGCTGAGCGGG CGCAGCACCTCCGCTGGTGTGCAGTGGTTCGCCGGCGTCGTTCTGCTGATCGTTGGGCCGGCGCTGTGGCTCGGGCACCG GCAGTGGCGCAAGTATGAAGAGCGCCAGGGTTTCCCACCCGCGCGCGGTGTGCTGTGTGAGATCTATCCGACGAGCTTTC ACATCGGTGACGGCGATGGGTGGTGCCTGACCTCGGTCGCTATCGACGCACGCACCCCGGATGAGCAGGTGTCGAGGATC GCGACCGCATTCCGGATCTGGCTGGCCCGCCTCGAAGCCGACAAGGAAGCCGACTCCGCCGCCAAGAATGCGTGGAACTC GGGGTTCCGGCGGCGCATCATCAACGCCTTCGCATCTGACGAGATCTTCGGCCCCGAGGCCTCCGGTGGATACCTCGTCC GCGGGACCGCCAAGCGTTCACGGTGGGCGCTGCTGCTCGACTGGCGAGAACCCGAGGCCCCGGCATACCCGATGCGCAAT GCGCTCGTGATCCCCGTCGACCAGGCACAGGGGTGA
Upstream 100 bases:
>100_bases GGATCGGGCAGACGCTGCGCTTCCGGCACACCACTCTGGACCCCGACGACCTGGAGGACGCACTGTTCGACAGCATCCGC GAACATCAGCGAGGCACCGG
Downstream 100 bases:
>100_bases GAAGCGCATGGGCTGGATAGACCGACTGCGCGGGCGGGAGCGGCCGTCCACCGGAGACGCGGCGTCGGCGGACGTCGGTG TCCCGGACCTCGCCGAACCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MSPTELRPWPADPVSAWAQAVAAPAAKSRYGERPSIRPLEEIAADVRGQRVFVPAVALVFTVVGAILVGGLLVGVFPLSG RSTSAGVQWFAGVVLLIVGPALWLGHRQWRKYEERQGFPPARGVLCEIYPTSFHIGDGDGWCLTSVAIDARTPDEQVSRI ATAFRIWLARLEADKEADSAAKNAWNSGFRRRIINAFASDEIFGPEASGGYLVRGTAKRSRWALLLDWREPEAPAYPMRN ALVIPVDQAQG
Sequences:
>Translated_251_residues MSPTELRPWPADPVSAWAQAVAAPAAKSRYGERPSIRPLEEIAADVRGQRVFVPAVALVFTVVGAILVGGLLVGVFPLSG RSTSAGVQWFAGVVLLIVGPALWLGHRQWRKYEERQGFPPARGVLCEIYPTSFHIGDGDGWCLTSVAIDARTPDEQVSRI ATAFRIWLARLEADKEADSAAKNAWNSGFRRRIINAFASDEIFGPEASGGYLVRGTAKRSRWALLLDWREPEAPAYPMRN ALVIPVDQAQG >Mature_250_residues SPTELRPWPADPVSAWAQAVAAPAAKSRYGERPSIRPLEEIAADVRGQRVFVPAVALVFTVVGAILVGGLLVGVFPLSGR STSAGVQWFAGVVLLIVGPALWLGHRQWRKYEERQGFPPARGVLCEIYPTSFHIGDGDGWCLTSVAIDARTPDEQVSRIA TAFRIWLARLEADKEADSAAKNAWNSGFRRRIINAFASDEIFGPEASGGYLVRGTAKRSRWALLLDWREPEAPAYPMRNA LVIPVDQAQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27389; Mature: 27257
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPTELRPWPADPVSAWAQAVAAPAAKSRYGERPSIRPLEEIAADVRGQRVFVPAVALVF CCCCCCCCCCCCHHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHHHCCCEEHHHHHHHHH TVVGAILVGGLLVGVFPLSGRSTSAGVQWFAGVVLLIVGPALWLGHRQWRKYEERQGFPP HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ARGVLCEIYPTSFHIGDGDGWCLTSVAIDARTPDEQVSRIATAFRIWLARLEADKEADSA HHCEEEEEECCEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH AKNAWNSGFRRRIINAFASDEIFGPEASGGYLVRGTAKRSRWALLLDWREPEAPAYPMRN HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCC ALVIPVDQAQG EEEEECCCCCC >Mature Secondary Structure SPTELRPWPADPVSAWAQAVAAPAAKSRYGERPSIRPLEEIAADVRGQRVFVPAVALVF CCCCCCCCCCCHHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHHHCCCEEHHHHHHHHH TVVGAILVGGLLVGVFPLSGRSTSAGVQWFAGVVLLIVGPALWLGHRQWRKYEERQGFPP HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ARGVLCEIYPTSFHIGDGDGWCLTSVAIDARTPDEQVSRIATAFRIWLARLEADKEADSA HHCEEEEEECCEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH AKNAWNSGFRRRIINAFASDEIFGPEASGGYLVRGTAKRSRWALLLDWREPEAPAYPMRN HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCC ALVIPVDQAQG EEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA