| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169627857
Identifier: 169627857
GI number: 169627857
Start: 757067
End: 757699
Strand: Reverse
Name: 169627857
Synonym: MAB_0756c
Alternate gene names: NA
Gene position: 757699-757067 (Counterclockwise)
Preceding gene: 169627860
Following gene: 169627856
Centisome position: 14.95
GC content: 63.98
Gene sequence:
>633_bases GTGGCGAACGGTCAAGCGCAGCGACGGAGCTGGGCAGGTGTCTCACCGGCCGAGCGTGCCGATGAGCGGCGTCGTGAACT CATGGCTGCCGGCGTGCGGCTACTGGGCCTGCGCCCCCGGCCCGCCGTCACCGTCCGCGCGGTCTGCCGCTCCGCGGGTA TGACAGAGCGGTACTTCTACGAACATTTCTCCGACCGCGACACCTTTGTCCGCGCCGTATACGACCACGTGGGCTTCCGC GCGATCGAAGCGCTCAGTGGTGTGCGGTCAGCGTATGAGGGTGTCGATGCCTTCGCCCGCCTCATGGTCGATGAACCGAC CATGGGACGAGTCCTGTTGATAGCACCGACCTTTGAGCCGACACTTTCCGAATCCGGGTATGACTGGCTGCCGCGATTCG TGGCCTTGTTGCAGGGAAAGCTCAGCACCAACCTCGCCGACGAGGTCCAGCAGCAGTTGGTGGCCACCAGCCTGGTCGGT GCCCTGACAAGCCTCTTCACGGCGTACCTGAACGAGGAACTGAACGTGGACCGACAGCGTTTCGTGGACTACTGCGTGCA GATACTGCTACAGGGAGCGAACGCGTCGGTTACGCCGCGGCCGACTTCGCCTTCTCCTCAGCAGCCTTCTTAG
Upstream 100 bases:
>100_bases GCGAGCTCGGACATATCGTTGACCATGCGGAACGCTCCATTGCGGTTCGACGTATAGTGACAATCAAGGTTGTCAACTTT GACATCACACTAGGAGGCCC
Downstream 100 bases:
>100_bases CAGCGGCGACCTCCGCCTTGTAGCAACGCAGAGTCACATGGACCATCTTGCCGCGGTCGTCCTGGCCCTTCTTGACGGTG AAGGCTTCCTGATGCGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Tetr Family Transcriptional Regulator; TetR-Family Regulatory Protein; AcrR Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MANGQAQRRSWAGVSPAERADERRRELMAAGVRLLGLRPRPAVTVRAVCRSAGMTERYFYEHFSDRDTFVRAVYDHVGFR AIEALSGVRSAYEGVDAFARLMVDEPTMGRVLLIAPTFEPTLSESGYDWLPRFVALLQGKLSTNLADEVQQQLVATSLVG ALTSLFTAYLNEELNVDRQRFVDYCVQILLQGANASVTPRPTSPSPQQPS
Sequences:
>Translated_210_residues MANGQAQRRSWAGVSPAERADERRRELMAAGVRLLGLRPRPAVTVRAVCRSAGMTERYFYEHFSDRDTFVRAVYDHVGFR AIEALSGVRSAYEGVDAFARLMVDEPTMGRVLLIAPTFEPTLSESGYDWLPRFVALLQGKLSTNLADEVQQQLVATSLVG ALTSLFTAYLNEELNVDRQRFVDYCVQILLQGANASVTPRPTSPSPQQPS >Mature_209_residues ANGQAQRRSWAGVSPAERADERRRELMAAGVRLLGLRPRPAVTVRAVCRSAGMTERYFYEHFSDRDTFVRAVYDHVGFRA IEALSGVRSAYEGVDAFARLMVDEPTMGRVLLIAPTFEPTLSESGYDWLPRFVALLQGKLSTNLADEVQQQLVATSLVGA LTSLFTAYLNEELNVDRQRFVDYCVQILLQGANASVTPRPTSPSPQQPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23312; Mature: 23181
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANGQAQRRSWAGVSPAERADERRRELMAAGVRLLGLRPRPAVTVRAVCRSAGMTERYFY CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHH EHFSDRDTFVRAVYDHVGFRAIEALSGVRSAYEGVDAFARLMVDEPTMGRVLLIAPTFEP HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC TLSESGYDWLPRFVALLQGKLSTNLADEVQQQLVATSLVGALTSLFTAYLNEELNVDRQR HHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH FVDYCVQILLQGANASVTPRPTSPSPQQPS HHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ANGQAQRRSWAGVSPAERADERRRELMAAGVRLLGLRPRPAVTVRAVCRSAGMTERYFY CCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHH EHFSDRDTFVRAVYDHVGFRAIEALSGVRSAYEGVDAFARLMVDEPTMGRVLLIAPTFEP HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC TLSESGYDWLPRFVALLQGKLSTNLADEVQQQLVATSLVGALTSLFTAYLNEELNVDRQR HHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH FVDYCVQILLQGANASVTPRPTSPSPQQPS HHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA