| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627817
Identifier: 169627817
GI number: 169627817
Start: 718466
End: 718930
Strand: Reverse
Name: 169627817
Synonym: MAB_0716c
Alternate gene names: NA
Gene position: 718930-718466 (Counterclockwise)
Preceding gene: 169627819
Following gene: 169627816
Centisome position: 14.19
GC content: 59.78
Gene sequence:
>465_bases ATGTCAAGCACAACGAAGCGAGCGCTGCTTTTCACACTGCTCAAGGTGTCCAAGGCGTTGACGCAATGGACGAGATCGAA CATCCCCACCGGCGGCGGCATGACCGTACCGCGTGCGACGGTGCTCGTAGGCTTGTCCATCAGGACCGAGCCCACCGGGA TGAGCGAGCTAGGCGAATATCTCGGTATGTCCCCGCGGAACATGACGGTGCTGATCGATGGCCTCGAGAAGGAAAACCTG GTCCGCCGGGTACCACACGAACGCGATCGAAGAATTACCTGCGTCGAAATCACGTATACGGGAAGGAAAATCGCCAAGAC GGAGCTCGGCCCCTCGGAACTGGCCTCTGCAGCGCTCTTCGACGACCTGTCGACCAGGGAACAAGCAGAACTGCTGCGCC TGCTGATCAAGGTCGCAGACTCCTTGCGCGCACGCGGTATTGACATACCGCAGTACCGCGGGTAG
Upstream 100 bases:
>100_bases CGGTCATAACGACGGTGAATTCGGTCACGACAAGCTCCCGCGAGGTTTAGGATCATGGATAACGTACCAGCAGTAATATT ATCAATTGTTAAGATTGGCC
Downstream 100 bases:
>100_bases TTGAAACTGGCAACAATCTATACCAAGATCACCTCTCGAATCTTGATCAGGAGGTGACGTGGAACTGCTGTCCATCCCGC CGCGCTGGGGCACCCTGGCA
Product: putative transcriptional regulator, MarR
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSSTTKRALLFTLLKVSKALTQWTRSNIPTGGGMTVPRATVLVGLSIRTEPTGMSELGEYLGMSPRNMTVLIDGLEKENL VRRVPHERDRRITCVEITYTGRKIAKTELGPSELASAALFDDLSTREQAELLRLLIKVADSLRARGIDIPQYRG
Sequences:
>Translated_154_residues MSSTTKRALLFTLLKVSKALTQWTRSNIPTGGGMTVPRATVLVGLSIRTEPTGMSELGEYLGMSPRNMTVLIDGLEKENL VRRVPHERDRRITCVEITYTGRKIAKTELGPSELASAALFDDLSTREQAELLRLLIKVADSLRARGIDIPQYRG >Mature_153_residues SSTTKRALLFTLLKVSKALTQWTRSNIPTGGGMTVPRATVLVGLSIRTEPTGMSELGEYLGMSPRNMTVLIDGLEKENLV RRVPHERDRRITCVEITYTGRKIAKTELGPSELASAALFDDLSTREQAELLRLLIKVADSLRARGIDIPQYRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17056; Mature: 16925
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTTKRALLFTLLKVSKALTQWTRSNIPTGGGMTVPRATVLVGLSIRTEPTGMSELGEY CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEEEEECCCCCCHHHHHHH LGMSPRNMTVLIDGLEKENLVRRVPHERDRRITCVEITYTGRKIAKTELGPSELASAALF HCCCCCCEEEEEECCCHHHHHHHCCCCCCCEEEEEEEEECCCCHHHCCCCHHHHHHHHHH DDLSTREQAELLRLLIKVADSLRARGIDIPQYRG HHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SSTTKRALLFTLLKVSKALTQWTRSNIPTGGGMTVPRATVLVGLSIRTEPTGMSELGEY CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEEEEECCCCCCHHHHHHH LGMSPRNMTVLIDGLEKENLVRRVPHERDRRITCVEITYTGRKIAKTELGPSELASAALF HCCCCCCEEEEEECCCHHHHHHHCCCCCCCEEEEEEEEECCCCHHHCCCCHHHHHHHHHH DDLSTREQAELLRLLIKVADSLRARGIDIPQYRG HHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA