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The map label for this gene is 169627816

Identifier: 169627816

GI number: 169627816

Start: 717394

End: 718407

Strand: Reverse

Name: 169627816

Synonym: MAB_0715c

Alternate gene names: NA

Gene position: 718407-717394 (Counterclockwise)

Preceding gene: 169627817

Following gene: 169627815

Centisome position: 14.18

GC content: 64.79

Gene sequence:

>1014_bases
GTGGAACTGCTGTCCATCCCGCCGCGCTGGGGCACCCTGGCATCGGAGTTGGCACAGCAGCAGGGCATGGACGCAGCCAA
AATGCTGATCGACGCCCAGATTTCGCCGCGGTTCCTCGCAGGCGAGCCCACCATGATCAGCCCGGCGCAGCTACGCGCGG
TGACACGCGAGGTCTTGGCCCGTACCGGTGACCTGTCATTCGGCAGCTGCCAAGCCCCGGTCCCACCCGAGGCGCTCCGG
GTTCTGATGTTCAGCCTGGCGACTTCGGAAACCGCCGGCGCGGCTTTTGCCCGCTGGGCGGCGTTCCGCGACGCCATGCC
GCTGGTGCCGAGTATGACCGTCGCCAGATCCGGCGAATTCGCCACCGTGGTGCTGGTGTCACCAAGCCCTAAGTTGCCCG
ACGTCACGTTCACCGAGTGGACTCTGGCCCTGGTCATCCGGGTCTGGAGCTGGTTGATCATGCGGGCGATCCACGCGGAA
CGAATTCTTCTCCCCCAGGCCCGCCCGGCCGGACGATCCGATCGCAGCAACATACTCAAGGCGCCGGTCGAGTTCGGAAG
CAATTCGGCCGCGGTGATCTTGGACGCCAAACTCCTCGATGTGCCGATTCTTCGCTCCGAGCAGGAGATCACCTCCATCC
TCGATCACCCCGAGCAGATCTGGTTCGACGTCGGCCGCTACCACCGGGAGCTGCCCGAGCGGGTGAGTCGGATAGTCGGA
TCGAGTATTGGGCAGGGCATTCCAACGGTGAGCGATATCGCCGCCGCACTGAACATGGCCCCCTCGGCGCTCCAGCGTTC
ACTTCGCAACGAGTTCGGCACCTCCATCCGGCGTATCCGCGACGCGGCGCTACGGACGGAGGCCATCAAAAGCCTTGAGG
ATGGCTCGGAGTCGCTCAACGATCTATCCGTCCGCCTGGGCTTCTCCGAATTGAGTGCCTTCACTCGCGCCTTCCGGCGC
TGGACGGGCGCCTCACCGGCTCAGTACCGGAACGGAACACGTTCGGTCAAGTAA

Upstream 100 bases:

>100_bases
TTGCGCGCACGCGGTATTGACATACCGCAGTACCGCGGGTAGTTGAAACTGGCAACAATCTATACCAAGATCACCTCTCG
AATCTTGATCAGGAGGTGAC

Downstream 100 bases:

>100_bases
TTCGCCCAATTCGGTCATCGCACGTGCCCCGTCGATCACATAGCCTCGGGCCAACCAAACCTGAGGGGGGAAGTTTGCTA
TCGGCTGAACGGCGCTTTCA

Product: putative HTH-type transcriptional regulator AraC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MELLSIPPRWGTLASELAQQQGMDAAKMLIDAQISPRFLAGEPTMISPAQLRAVTREVLARTGDLSFGSCQAPVPPEALR
VLMFSLATSETAGAAFARWAAFRDAMPLVPSMTVARSGEFATVVLVSPSPKLPDVTFTEWTLALVIRVWSWLIMRAIHAE
RILLPQARPAGRSDRSNILKAPVEFGSNSAAVILDAKLLDVPILRSEQEITSILDHPEQIWFDVGRYHRELPERVSRIVG
SSIGQGIPTVSDIAAALNMAPSALQRSLRNEFGTSIRRIRDAALRTEAIKSLEDGSESLNDLSVRLGFSELSAFTRAFRR
WTGASPAQYRNGTRSVK

Sequences:

>Translated_337_residues
MELLSIPPRWGTLASELAQQQGMDAAKMLIDAQISPRFLAGEPTMISPAQLRAVTREVLARTGDLSFGSCQAPVPPEALR
VLMFSLATSETAGAAFARWAAFRDAMPLVPSMTVARSGEFATVVLVSPSPKLPDVTFTEWTLALVIRVWSWLIMRAIHAE
RILLPQARPAGRSDRSNILKAPVEFGSNSAAVILDAKLLDVPILRSEQEITSILDHPEQIWFDVGRYHRELPERVSRIVG
SSIGQGIPTVSDIAAALNMAPSALQRSLRNEFGTSIRRIRDAALRTEAIKSLEDGSESLNDLSVRLGFSELSAFTRAFRR
WTGASPAQYRNGTRSVK
>Mature_337_residues
MELLSIPPRWGTLASELAQQQGMDAAKMLIDAQISPRFLAGEPTMISPAQLRAVTREVLARTGDLSFGSCQAPVPPEALR
VLMFSLATSETAGAAFARWAAFRDAMPLVPSMTVARSGEFATVVLVSPSPKLPDVTFTEWTLALVIRVWSWLIMRAIHAE
RILLPQARPAGRSDRSNILKAPVEFGSNSAAVILDAKLLDVPILRSEQEITSILDHPEQIWFDVGRYHRELPERVSRIVG
SSIGQGIPTVSDIAAALNMAPSALQRSLRNEFGTSIRRIRDAALRTEAIKSLEDGSESLNDLSVRLGFSELSAFTRAFRR
WTGASPAQYRNGTRSVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 36901; Mature: 36901

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLSIPPRWGTLASELAQQQGMDAAKMLIDAQISPRFLAGEPTMISPAQLRAVTREVLA
CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHH
RTGDLSFGSCQAPVPPEALRVLMFSLATSETAGAAFARWAAFRDAMPLVPSMTVARSGEF
HCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCE
ATVVLVSPSPKLPDVTFTEWTLALVIRVWSWLIMRAIHAERILLPQARPAGRSDRSNILK
EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
APVEFGSNSAAVILDAKLLDVPILRSEQEITSILDHPEQIWFDVGRYHRELPERVSRIVG
HHHHHCCCCEEEEEEHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SSIGQGIPTVSDIAAALNMAPSALQRSLRNEFGTSIRRIRDAALRTEAIKSLEDGSESLN
HHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLSVRLGFSELSAFTRAFRRWTGASPAQYRNGTRSVK
HHHHHCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCC
>Mature Secondary Structure
MELLSIPPRWGTLASELAQQQGMDAAKMLIDAQISPRFLAGEPTMISPAQLRAVTREVLA
CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHH
RTGDLSFGSCQAPVPPEALRVLMFSLATSETAGAAFARWAAFRDAMPLVPSMTVARSGEF
HCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCE
ATVVLVSPSPKLPDVTFTEWTLALVIRVWSWLIMRAIHAERILLPQARPAGRSDRSNILK
EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
APVEFGSNSAAVILDAKLLDVPILRSEQEITSILDHPEQIWFDVGRYHRELPERVSRIVG
HHHHHCCCCEEEEEEHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SSIGQGIPTVSDIAAALNMAPSALQRSLRNEFGTSIRRIRDAALRTEAIKSLEDGSESLN
HHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLSVRLGFSELSAFTRAFRRWTGASPAQYRNGTRSVK
HHHHHCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036; 12368430 [H]