| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627810
Identifier: 169627810
GI number: 169627810
Start: 712154
End: 712795
Strand: Direct
Name: 169627810
Synonym: MAB_0709
Alternate gene names: NA
Gene position: 712154-712795 (Clockwise)
Preceding gene: 169627809
Following gene: 169627811
Centisome position: 14.05
GC content: 70.87
Gene sequence:
>642_bases ATGTCCGGCGCGCGAGTGCTGGTGCTGGCCGTTGTGCTCGTGGCCTGGCCGGCGGTACTGGAACGGTTCCCCCAGCGCTG GCGCCCTCTCATCGGGGCGGGCACCAGCACGGCCCTGGCCGGTGCCGCGGGCATCCCGCTCGGTCTCAGGCCGCCCCAGC TTGGCGCGGGATTGCGGCTCGGTGGGATCGTCGCGTCGGCGGTGGCCGCCGCCGTAGGCGCCTCGCCCGCACTACAGCCA GTACGCGCCTCGATGCGAGCTCGCGACATCGACCTACATCCGGCAGTCTGGCTGGGCCTGCACATCCCGGTGGGCACAGT GTGGTCCGAGGAACTCGCCTTCCGTGGAGTGTTGCAGCCCCTGGCGACCGAAGCCTTCGGGCGTACGGCGGGCAGCGCAG TCCAGGCGATGGTCTTCGGGCTGGCGCACATCCGGCCCGCGCGTGCCGCCGGCGACTCCATTCCGGGGACGGTGCTGGTC ACCGGAATGTTCGGCTGGCTGCTGGGCCGGCTTCGTGAGCGATCGGGCAGCGTGGTGGCGCCGATGCTGGCTCACCTGGC GCTCAACGAGGCCGGCGCGGTGGCAACCCTGTACCTCGGCCGGTCGAATGTCGACTTGTCACCAGAAAGTGCGAGTAACT GA
Upstream 100 bases:
>100_bases GGGCGGCCATCGCCCCGCCAGCGGGCTGGACCCCGCAGGACACCGAACGCATCCGGAAGGCACTCGTCGACACCGCGTCG CTCGACGGCCCCGACACGTG
Downstream 100 bases:
>100_bases TACCAAAAGTCGACATTCGACGGAATACTGCACAGATGGCCTCGAACTGGATGAGCAGGGCCGGTGCAGCGCTGGCAGGC GTGACGGTCGCCGTCGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein; Protease; Caax Amino Protease Family Protein
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MSGARVLVLAVVLVAWPAVLERFPQRWRPLIGAGTSTALAGAAGIPLGLRPPQLGAGLRLGGIVASAVAAAVGASPALQP VRASMRARDIDLHPAVWLGLHIPVGTVWSEELAFRGVLQPLATEAFGRTAGSAVQAMVFGLAHIRPARAAGDSIPGTVLV TGMFGWLLGRLRERSGSVVAPMLAHLALNEAGAVATLYLGRSNVDLSPESASN
Sequences:
>Translated_213_residues MSGARVLVLAVVLVAWPAVLERFPQRWRPLIGAGTSTALAGAAGIPLGLRPPQLGAGLRLGGIVASAVAAAVGASPALQP VRASMRARDIDLHPAVWLGLHIPVGTVWSEELAFRGVLQPLATEAFGRTAGSAVQAMVFGLAHIRPARAAGDSIPGTVLV TGMFGWLLGRLRERSGSVVAPMLAHLALNEAGAVATLYLGRSNVDLSPESASN >Mature_212_residues SGARVLVLAVVLVAWPAVLERFPQRWRPLIGAGTSTALAGAAGIPLGLRPPQLGAGLRLGGIVASAVAAAVGASPALQPV RASMRARDIDLHPAVWLGLHIPVGTVWSEELAFRGVLQPLATEAFGRTAGSAVQAMVFGLAHIRPARAAGDSIPGTVLVT GMFGWLLGRLRERSGSVVAPMLAHLALNEAGAVATLYLGRSNVDLSPESASN
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21851; Mature: 21720
Theoretical pI: Translated: 11.99; Mature: 11.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGARVLVLAVVLVAWPAVLERFPQRWRPLIGAGTSTALAGAAGIPLGLRPPQLGAGLRL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCHH GGIVASAVAAAVGASPALQPVRASMRARDIDLHPAVWLGLHIPVGTVWSEELAFRGVLQP HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH LATEAFGRTAGSAVQAMVFGLAHIRPARAAGDSIPGTVLVTGMFGWLLGRLRERSGSVVA HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH PMLAHLALNEAGAVATLYLGRSNVDLSPESASN HHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure SGARVLVLAVVLVAWPAVLERFPQRWRPLIGAGTSTALAGAAGIPLGLRPPQLGAGLRL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCHH GGIVASAVAAAVGASPALQPVRASMRARDIDLHPAVWLGLHIPVGTVWSEELAFRGVLQP HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH LATEAFGRTAGSAVQAMVFGLAHIRPARAAGDSIPGTVLVTGMFGWLLGRLRERSGSVVA HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH PMLAHLALNEAGAVATLYLGRSNVDLSPESASN HHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA