| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627809
Identifier: 169627809
GI number: 169627809
Start: 710352
End: 712154
Strand: Direct
Name: 169627809
Synonym: MAB_0708
Alternate gene names: NA
Gene position: 710352-712154 (Clockwise)
Preceding gene: 169627808
Following gene: 169627810
Centisome position: 14.02
GC content: 65.0
Gene sequence:
>1803_bases ATGAGCGAGACTCCTGGAGTCCCGGTAACAACGAGCACCGTCGATCCCGATGACTGGATCGGCCGCAGTTGGCTGGCATT TCAGGAACTGGAAGAGCACATCGAACACCGGCACCCGCTGGTGGCCTGGGCGTGGAATCTGCTGCGGTTGGATTTCTGTG GAATCGCTTTCGGCGCCCTGTTCTTCTGCCTGTCGCTGACTCCGTCGCTGATGCCGCGCACCTGGCTTTTTCAGGGGCTT ATCGGCGGCGCCACCGCGGCCATCGGTTACGGCATCGGCGTCGCTCTCTCCAAACTTGTGCTCCGTTTCTGGCTGCGCCA TCAGAAGTGGTGGCCGCTGCGCGATCGGGTGATGATCACCGTCAAACTCGGGGTGGTGGTCCTGGGAGCGGTGTGCTCAC TGGCGATGATCGTGCCCGCCGCCCGTTGGCAGCGCCAGATCGCAGCCCTCATGGATGCCCAGGGCCCGACGACATTGGAA TACTCAAAGGCGTTTCTCGTGTCCATAGCCGTCGGAGCGCTGTTCATTTCGGTAGCCCGGATACTGCGTGACCTGGTGCG GTTGCTGGCCCGGTTCCTGATCCGCCGTCTGCGCCTGAGCCAGGAGGTGTCGCTGCTCATCGGTACCGCCATCGTGGCGG TACTGGCCATCATGCTGTTCAACGGCGTGTTGGTGCGCGGATTCTTCGCGGCCGCCAATGCCTCGTTCGGCCCGCATAAC GACACCACCAGGGCAGGTGTACAACAACCCCTCCAACCCGAGCGGTCCGGCAGCCCGGCGTCACTGTCCTCCTGGGACAG TCTTGGATACGAGGGCCGCAACTTCGTCTCCGGCGGCTTGCACGCCGATGTACTCGCCAAGGTGAATGGGCGTCCCGCCA AGGAGCCCATTCGCGTGTACGCGGGGCTGGAGACCGCCGATACGGCCGAAGAGCGCGCGGACATATTGGTGCGGGAACTG GAGCGCACCAAGGCATTCGATCGCAAGGTGTTGGTCATTGTGCCGACCACGGGCACCGGATGGGTGACGCCCGCCGCGGC GCGGGGCATCGAGTTGATGTACAACGGCGACACCGCGATCGTCGCCACCCAGTACTCGTTCCTGCCCAGCTGGATCTCCT TCCTTGCCGACAAAAAGAAGGCCCTCGCCTCGGGTCAGTTGCTGGTGGACACCGTCCAGAAGCGCTGGGCGCAGCAGCCT GAGGGACACCGCCCCAAGCTGCTGATCTACGGCGAAAGCCTCGGATCTTTTGCGGGACAAGGTGCGTTCGGTGGCCTCGG CGACATAAGGGCGGCGGGTGTCGCCGGTGTGTTGTGGACCGGCCCGCCGAACTTCAGTCATATCTGGAACGAGCTGGTAT CCAAGCGGGACCGGGGCACACTGGAAGCACTGCCGGTGTACGACAGCGGATTCACCGCCCGCTTCGCGATCGGCCCTGAC ATCGACGCCCTCGCCAAACCGCCGTGGCAGAACCCGAAGGTGCTCTTCGTGCAGCATCCGTCGGACCCGGTGACCTGGTG GTCCACCGATCTGCTGTTCAGCGAACCGGATTGGCTCAAGGAGGCCCCGGTGGGCGACCGGTCGGCTGCCATGCGCTGGT ACCCGATCGTCACGTTCTGGCAGGTGGCGGCCGACCTGGCGAATGCCGTCGGCGTGCCCGACGGGCACGGCCATAACTAC GGCATCTCGTCGGTCAACGGCTGGGCGGCCATCGCCCCGCCAGCGGGCTGGACCCCGCAGGACACCGAACGCATCCGGAA GGCACTCGTCGACACCGCGTCGCTCGACGGCCCCGACACGTGA
Upstream 100 bases:
>100_bases TCGATCAGGGCTCGGATTCCGTTGAGGTGCAGGGACAGTTCTCGGTCACCCTGGCCGAGCTACGCGAGATTCACGAAGGC GTGCTGCCCGGACTGTTCGG
Downstream 100 bases:
>100_bases TGTCCGGCGCGCGAGTGCTGGTGCTGGCCGTTGTGCTCGTGGCCTGGCCGGCGGTACTGGAACGGTTCCCCCAGCGCTGG CGCCCTCTCATCGGGGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 600; Mature: 599
Protein sequence:
>600_residues MSETPGVPVTTSTVDPDDWIGRSWLAFQELEEHIEHRHPLVAWAWNLLRLDFCGIAFGALFFCLSLTPSLMPRTWLFQGL IGGATAAIGYGIGVALSKLVLRFWLRHQKWWPLRDRVMITVKLGVVVLGAVCSLAMIVPAARWQRQIAALMDAQGPTTLE YSKAFLVSIAVGALFISVARILRDLVRLLARFLIRRLRLSQEVSLLIGTAIVAVLAIMLFNGVLVRGFFAAANASFGPHN DTTRAGVQQPLQPERSGSPASLSSWDSLGYEGRNFVSGGLHADVLAKVNGRPAKEPIRVYAGLETADTAEERADILVREL ERTKAFDRKVLVIVPTTGTGWVTPAAARGIELMYNGDTAIVATQYSFLPSWISFLADKKKALASGQLLVDTVQKRWAQQP EGHRPKLLIYGESLGSFAGQGAFGGLGDIRAAGVAGVLWTGPPNFSHIWNELVSKRDRGTLEALPVYDSGFTARFAIGPD IDALAKPPWQNPKVLFVQHPSDPVTWWSTDLLFSEPDWLKEAPVGDRSAAMRWYPIVTFWQVAADLANAVGVPDGHGHNY GISSVNGWAAIAPPAGWTPQDTERIRKALVDTASLDGPDT
Sequences:
>Translated_600_residues MSETPGVPVTTSTVDPDDWIGRSWLAFQELEEHIEHRHPLVAWAWNLLRLDFCGIAFGALFFCLSLTPSLMPRTWLFQGL IGGATAAIGYGIGVALSKLVLRFWLRHQKWWPLRDRVMITVKLGVVVLGAVCSLAMIVPAARWQRQIAALMDAQGPTTLE YSKAFLVSIAVGALFISVARILRDLVRLLARFLIRRLRLSQEVSLLIGTAIVAVLAIMLFNGVLVRGFFAAANASFGPHN DTTRAGVQQPLQPERSGSPASLSSWDSLGYEGRNFVSGGLHADVLAKVNGRPAKEPIRVYAGLETADTAEERADILVREL ERTKAFDRKVLVIVPTTGTGWVTPAAARGIELMYNGDTAIVATQYSFLPSWISFLADKKKALASGQLLVDTVQKRWAQQP EGHRPKLLIYGESLGSFAGQGAFGGLGDIRAAGVAGVLWTGPPNFSHIWNELVSKRDRGTLEALPVYDSGFTARFAIGPD IDALAKPPWQNPKVLFVQHPSDPVTWWSTDLLFSEPDWLKEAPVGDRSAAMRWYPIVTFWQVAADLANAVGVPDGHGHNY GISSVNGWAAIAPPAGWTPQDTERIRKALVDTASLDGPDT >Mature_599_residues SETPGVPVTTSTVDPDDWIGRSWLAFQELEEHIEHRHPLVAWAWNLLRLDFCGIAFGALFFCLSLTPSLMPRTWLFQGLI GGATAAIGYGIGVALSKLVLRFWLRHQKWWPLRDRVMITVKLGVVVLGAVCSLAMIVPAARWQRQIAALMDAQGPTTLEY SKAFLVSIAVGALFISVARILRDLVRLLARFLIRRLRLSQEVSLLIGTAIVAVLAIMLFNGVLVRGFFAAANASFGPHND TTRAGVQQPLQPERSGSPASLSSWDSLGYEGRNFVSGGLHADVLAKVNGRPAKEPIRVYAGLETADTAEERADILVRELE RTKAFDRKVLVIVPTTGTGWVTPAAARGIELMYNGDTAIVATQYSFLPSWISFLADKKKALASGQLLVDTVQKRWAQQPE GHRPKLLIYGESLGSFAGQGAFGGLGDIRAAGVAGVLWTGPPNFSHIWNELVSKRDRGTLEALPVYDSGFTARFAIGPDI DALAKPPWQNPKVLFVQHPSDPVTWWSTDLLFSEPDWLKEAPVGDRSAAMRWYPIVTFWQVAADLANAVGVPDGHGHNYG ISSVNGWAAIAPPAGWTPQDTERIRKALVDTASLDGPDT
Specific function: Unknown
COG id: COG4425
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65464; Mature: 65333
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETPGVPVTTSTVDPDDWIGRSWLAFQELEEHIEHRHPLVAWAWNLLRLDFCGIAFGAL CCCCCCCCEEECCCCCHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH FFCLSLTPSLMPRTWLFQGLIGGATAAIGYGIGVALSKLVLRFWLRHQKWWPLRDRVMIT HHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE VKLGVVVLGAVCSLAMIVPAARWQRQIAALMDAQGPTTLEYSKAFLVSIAVGALFISVAR EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ILRDLVRLLARFLIRRLRLSQEVSLLIGTAIVAVLAIMLFNGVLVRGFFAAANASFGPHN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DTTRAGVQQPLQPERSGSPASLSSWDSLGYEGRNFVSGGLHADVLAKVNGRPAKEPIRVY CCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEE AGLETADTAEERADILVRELERTKAFDRKVLVIVPTTGTGWVTPAAARGIELMYNGDTAI ECCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHCCEEEEECCCEEE VATQYSFLPSWISFLADKKKALASGQLLVDTVQKRWAQQPEGHRPKLLIYGESLGSFAGQ EEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEECCCHHCCCCC GAFGGLGDIRAAGVAGVLWTGPPNFSHIWNELVSKRDRGTLEALPVYDSGFTARFAIGPD CCCCCCCHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCC IDALAKPPWQNPKVLFVQHPSDPVTWWSTDLLFSEPDWLKEAPVGDRSAAMRWYPIVTFW HHHHCCCCCCCCCEEEEECCCCCCCEEECCCEECCCCHHHCCCCCCCCCCEEHHHHHHHH QVAADLANAVGVPDGHGHNYGISSVNGWAAIAPPAGWTPQDTERIRKALVDTASLDGPDT HHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SETPGVPVTTSTVDPDDWIGRSWLAFQELEEHIEHRHPLVAWAWNLLRLDFCGIAFGAL CCCCCCCEEECCCCCHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH FFCLSLTPSLMPRTWLFQGLIGGATAAIGYGIGVALSKLVLRFWLRHQKWWPLRDRVMIT HHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE VKLGVVVLGAVCSLAMIVPAARWQRQIAALMDAQGPTTLEYSKAFLVSIAVGALFISVAR EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ILRDLVRLLARFLIRRLRLSQEVSLLIGTAIVAVLAIMLFNGVLVRGFFAAANASFGPHN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DTTRAGVQQPLQPERSGSPASLSSWDSLGYEGRNFVSGGLHADVLAKVNGRPAKEPIRVY CCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEE AGLETADTAEERADILVRELERTKAFDRKVLVIVPTTGTGWVTPAAARGIELMYNGDTAI ECCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHCCEEEEECCCEEE VATQYSFLPSWISFLADKKKALASGQLLVDTVQKRWAQQPEGHRPKLLIYGESLGSFAGQ EEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEECCCHHCCCCC GAFGGLGDIRAAGVAGVLWTGPPNFSHIWNELVSKRDRGTLEALPVYDSGFTARFAIGPD CCCCCCCHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCC IDALAKPPWQNPKVLFVQHPSDPVTWWSTDLLFSEPDWLKEAPVGDRSAAMRWYPIVTFW HHHHCCCCCCCCCEEEEECCCCCCCEEECCCEECCCCHHHCCCCCCCCCCEEHHHHHHHH QVAADLANAVGVPDGHGHNYGISSVNGWAAIAPPAGWTPQDTERIRKALVDTASLDGPDT HHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA