| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627804
Identifier: 169627804
GI number: 169627804
Start: 704513
End: 705331
Strand: Reverse
Name: 169627804
Synonym: MAB_0703c
Alternate gene names: NA
Gene position: 705331-704513 (Counterclockwise)
Preceding gene: 169627805
Following gene: 169627802
Centisome position: 13.92
GC content: 65.69
Gene sequence:
>819_bases ATGACCGTCACGATCGTCGCCAAAGAGCCCGTCGTCTCCGCGTTGGCCGCCGAGTGGAGCGCGCTGGATGAGCTGGGCGC CAGCTTGACCGACGACCAATGGGCCACGCCGTCCGTATTGCCGGGCTGGACGGTCAAGGACGTCGTCGCACACGTGGTGG GCACCGAACGCCTGCTGTCGGGCGACCCGATTCCCAGTACCGACGAGGCCGTCACCGACCTGCCGCATGTGCGCAACCCC GTGGGCGTCCTCAACGAGAGGTGGCTCACCTACTACCGCAAGCTGCCACCGGCCGCGGTGATGAACGACCTGCGCACCGT CACCAGCGCCCGCCTGGCCGTTCTGGAAGGTTTGTCCCAAGAGCAGTTCAATGCCGAGACCGCTACTCCCGTGGGGCCGG AGAGCTATGGCCGGTTCATGCAGATACGTGACTTTGACTGCTGGATGCACGAACTGGATGTGCGGGACAGCCTCGGACTG CCTGCTCCGACGGATCCGGTGACGGCCGCGCCCGCGCTCACCGAACTGATCAACGCGCTACCGTTCTTGATAGGAAAGCG AGCCGGCGCGCCCCAGGGCAGTCGTATCCGCTTTGTGCTCAACGGAGTTGGCGCGCAAACGGTCAACATCGAGATTCCGG ACCGGGCTCGCATTGTGGCGGCCCTCTCGGAGGCCCCGCAGGTGACGCTCACCGCGGACACCTGCGAGTTCGCCCGTCAT CTGGGCGGGCGCGCCAGCGCCAACCGCAACGGATTCACTCTTGACGGCGATCCCGACCTGGGCTGGAAGATCGTCGCCAA TCTGCGTTTCACGATGTAG
Upstream 100 bases:
>100_bases GCAAGAACCGCAACCCAGAACGCCGGACAATGTGAATATGCAGGCCAAGCTGCGCGCCCAATTCGAAACCTGCCCGCGCT GACTCTCGTAGGCTCGGACC
Downstream 100 bases:
>100_bases CGGGCAGCTCCAGAAACGCCTGCAGCGCATCGGCGTACATCGGCACGTCGTGTGCGCCCATCAGTTCGCGCACCGAGTGC ATGGCAAGGGTCGCGGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MTVTIVAKEPVVSALAAEWSALDELGASLTDDQWATPSVLPGWTVKDVVAHVVGTERLLSGDPIPSTDEAVTDLPHVRNP VGVLNERWLTYYRKLPPAAVMNDLRTVTSARLAVLEGLSQEQFNAETATPVGPESYGRFMQIRDFDCWMHELDVRDSLGL PAPTDPVTAAPALTELINALPFLIGKRAGAPQGSRIRFVLNGVGAQTVNIEIPDRARIVAALSEAPQVTLTADTCEFARH LGGRASANRNGFTLDGDPDLGWKIVANLRFTM
Sequences:
>Translated_272_residues MTVTIVAKEPVVSALAAEWSALDELGASLTDDQWATPSVLPGWTVKDVVAHVVGTERLLSGDPIPSTDEAVTDLPHVRNP VGVLNERWLTYYRKLPPAAVMNDLRTVTSARLAVLEGLSQEQFNAETATPVGPESYGRFMQIRDFDCWMHELDVRDSLGL PAPTDPVTAAPALTELINALPFLIGKRAGAPQGSRIRFVLNGVGAQTVNIEIPDRARIVAALSEAPQVTLTADTCEFARH LGGRASANRNGFTLDGDPDLGWKIVANLRFTM >Mature_271_residues TVTIVAKEPVVSALAAEWSALDELGASLTDDQWATPSVLPGWTVKDVVAHVVGTERLLSGDPIPSTDEAVTDLPHVRNPV GVLNERWLTYYRKLPPAAVMNDLRTVTSARLAVLEGLSQEQFNAETATPVGPESYGRFMQIRDFDCWMHELDVRDSLGLP APTDPVTAAPALTELINALPFLIGKRAGAPQGSRIRFVLNGVGAQTVNIEIPDRARIVAALSEAPQVTLTADTCEFARHL GGRASANRNGFTLDGDPDLGWKIVANLRFTM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29360; Mature: 29228
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTIVAKEPVVSALAAEWSALDELGASLTDDQWATPSVLPGWTVKDVVAHVVGTERLLS CEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC GDPIPSTDEAVTDLPHVRNPVGVLNERWLTYYRKLPPAAVMNDLRTVTSARLAVLEGLSQ CCCCCCCCHHHHHCCHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCH EQFNAETATPVGPESYGRFMQIRDFDCWMHELDVRDSLGLPAPTDPVTAAPALTELINAL HHCCCCCCCCCCHHHHCCEEEEECHHHHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHH PFLIGKRAGAPQGSRIRFVLNGVGAQTVNIEIPDRARIVAALSEAPQVTLTADTCEFARH HHHHHCCCCCCCCCEEEEEEECCCCEEEEEECCCHHHHHHHHCCCCEEEEEHHHHHHHHH LGGRASANRNGFTLDGDPDLGWKIVANLRFTM CCCCCCCCCCCEEECCCCCCCEEEEEEEEECC >Mature Secondary Structure TVTIVAKEPVVSALAAEWSALDELGASLTDDQWATPSVLPGWTVKDVVAHVVGTERLLS EEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC GDPIPSTDEAVTDLPHVRNPVGVLNERWLTYYRKLPPAAVMNDLRTVTSARLAVLEGLSQ CCCCCCCCHHHHHCCHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCH EQFNAETATPVGPESYGRFMQIRDFDCWMHELDVRDSLGLPAPTDPVTAAPALTELINAL HHCCCCCCCCCCHHHHCCEEEEECHHHHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHH PFLIGKRAGAPQGSRIRFVLNGVGAQTVNIEIPDRARIVAALSEAPQVTLTADTCEFARH HHHHHCCCCCCCCCEEEEEEECCCCEEEEEECCCHHHHHHHHCCCCEEEEEHHHHHHHHH LGGRASANRNGFTLDGDPDLGWKIVANLRFTM CCCCCCCCCCCEEECCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA