| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is yfeX [H]
Identifier: 169627802
GI number: 169627802
Start: 702205
End: 703212
Strand: Reverse
Name: yfeX [H]
Synonym: MAB_0700c
Alternate gene names: 169627802
Gene position: 703212-702205 (Counterclockwise)
Preceding gene: 169627804
Following gene: 169627801
Centisome position: 13.88
GC content: 62.1
Gene sequence:
>1008_bases GTGCCCGATTCCGTGCCGCAGGCCGTCCTAGAACCGCTGTCCTCTTCGGCCATCTTTCTGGTGGTGACCATCGACGAGGG TGCCGAACAGGCTGTTCATGGCGCCCTGCCGGAGCTGTCCGGCCTGGCAAGGGCCATTGGGTTCCGCGACCCGGCACGGA GATTGTCGCTGGTCACCGCCATCGGATCCGAGGCATGGGACCGACTTTTTTCCGGTTCGCGGCCTGCCCGGCTATGGCCG TTCCGGGAGGTGCGCGGCGAACGCCACGTGGCGCCGGCCACACCCGGTGATCTGCTGTTCCATATCCGTGCCTCGACCAT GGACCGCTGTTTCGAGCTGGCCGCCCGCATCACCACCATGCTGGCGGGTGCAGTGACAGTGGCCGACGAGGTACACGGTT TCCAGTACTTCGACAACCGCGACCTGCTGGGATTTGTGGACGGCACCGAGAATCCCGACGGGGCGGACGCCGCCGCGGCC GCTCTGGTCGGCCCCGAGGACCCGGACTTCATCGGCGGCAGCTACGTACACGTGCAGAAGTACTTACACAACATGGCCGC CTGGAGCGCTCTTCCCGTCGACGAGCAAGAGAAGGTGATCGGGCGTACCAAGCTGGACGACGTCGAATTCGATGATGCCG TCAAGCCGTCGAATTCTCATGTGGCACTGAATGTCATTGAAGACGAAGAAGGCAACGAGCTGCAGGTCTTGCGACGCAAC ATGCCTTTCGGAGAGCTGGGGAAATCCGAATTCGGGACCTACTACATCGCCTATTCACGCACTCCAGACGTGACAGAACG CATGCTGCACAACATGTTTGTCGGAGATCCGCCAGGCAACACGGATCGCATCCTCGACTTCTCGACCGCCATCACCGGCG GGCTGTTCTTCGCCCCGGCCGCAGACTTTCTCGACGCTCCTCCGTCGCTGCCCGCCGAGGTGGCCATCAAATCTGTTGAA TACCAGGGTTCTCTATCGATCGGCAGCCTGAAAGGATCGTTGTCATGA
Upstream 100 bases:
>100_bases GGAACGGGGACGGCGAAGCGTCGATGAATTGGCAAAGTCCTACTGCGGTCGCGGTCACGCTTCCCATGATGGCTGACCGA ATACGGTCTAGGGTCGAAGC
Downstream 100 bases:
>100_bases ACAACCTGTACCGCGAACTCGCACCTATCACCGACGAGGCATGGGCCGAGATCGAGAACGAGGCCGCCCGTACCTTCAAG CGCCACATCGCGGGGCGCCG
Product: putative Dyp-type peroxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MPDSVPQAVLEPLSSSAIFLVVTIDEGAEQAVHGALPELSGLARAIGFRDPARRLSLVTAIGSEAWDRLFSGSRPARLWP FREVRGERHVAPATPGDLLFHIRASTMDRCFELAARITTMLAGAVTVADEVHGFQYFDNRDLLGFVDGTENPDGADAAAA ALVGPEDPDFIGGSYVHVQKYLHNMAAWSALPVDEQEKVIGRTKLDDVEFDDAVKPSNSHVALNVIEDEEGNELQVLRRN MPFGELGKSEFGTYYIAYSRTPDVTERMLHNMFVGDPPGNTDRILDFSTAITGGLFFAPAADFLDAPPSLPAEVAIKSVE YQGSLSIGSLKGSLS
Sequences:
>Translated_335_residues MPDSVPQAVLEPLSSSAIFLVVTIDEGAEQAVHGALPELSGLARAIGFRDPARRLSLVTAIGSEAWDRLFSGSRPARLWP FREVRGERHVAPATPGDLLFHIRASTMDRCFELAARITTMLAGAVTVADEVHGFQYFDNRDLLGFVDGTENPDGADAAAA ALVGPEDPDFIGGSYVHVQKYLHNMAAWSALPVDEQEKVIGRTKLDDVEFDDAVKPSNSHVALNVIEDEEGNELQVLRRN MPFGELGKSEFGTYYIAYSRTPDVTERMLHNMFVGDPPGNTDRILDFSTAITGGLFFAPAADFLDAPPSLPAEVAIKSVE YQGSLSIGSLKGSLS >Mature_334_residues PDSVPQAVLEPLSSSAIFLVVTIDEGAEQAVHGALPELSGLARAIGFRDPARRLSLVTAIGSEAWDRLFSGSRPARLWPF REVRGERHVAPATPGDLLFHIRASTMDRCFELAARITTMLAGAVTVADEVHGFQYFDNRDLLGFVDGTENPDGADAAAAA LVGPEDPDFIGGSYVHVQKYLHNMAAWSALPVDEQEKVIGRTKLDDVEFDDAVKPSNSHVALNVIEDEEGNELQVLRRNM PFGELGKSEFGTYYIAYSRTPDVTERMLHNMFVGDPPGNTDRILDFSTAITGGLFFAPAADFLDAPPSLPAEVAIKSVEY QGSLSIGSLKGSLS
Specific function: Unknown
COG id: COG2837
COG function: function code P; Predicted iron-dependent peroxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DyP-type peroxidase family [H]
Homologues:
Organism=Escherichia coli, GI87082102, Length=256, Percent_Identity=36.328125, Blast_Score=147, Evalue=1e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011008 - InterPro: IPR006314 [H]
Pfam domain/function: PF04261 Dyp_perox [H]
EC number: NA
Molecular weight: Translated: 36218; Mature: 36087
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDSVPQAVLEPLSSSAIFLVVTIDEGAEQAVHGALPELSGLARAIGFRDPARRLSLVTA CCCCHHHHHHHHCCCCEEEEEEEECCCHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHH IGSEAWDRLFSGSRPARLWPFREVRGERHVAPATPGDLLFHIRASTMDRCFELAARITTM HHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH LAGAVTVADEVHGFQYFDNRDLLGFVDGTENPDGADAAAAALVGPEDPDFIGGSYVHVQK HHHHHHHHHHHCCCEEECCCCEEEEECCCCCCCCHHHHHHHEECCCCCCCCCCCHHHHHH YLHNMAAWSALPVDEQEKVIGRTKLDDVEFDDAVKPSNSHVALNVIEDEEGNELQVLRRN HHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHC MPFGELGKSEFGTYYIAYSRTPDVTERMLHNMFVGDPPGNTDRILDFSTAITGGLFFAPA CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEHHHHHHCCCCCCCC ADFLDAPPSLPAEVAIKSVEYQGSLSIGSLKGSLS HHHHCCCCCCCHHHHHEEEEECCCEEEECCCCCCC >Mature Secondary Structure PDSVPQAVLEPLSSSAIFLVVTIDEGAEQAVHGALPELSGLARAIGFRDPARRLSLVTA CCCHHHHHHHHCCCCEEEEEEEECCCHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHH IGSEAWDRLFSGSRPARLWPFREVRGERHVAPATPGDLLFHIRASTMDRCFELAARITTM HHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH LAGAVTVADEVHGFQYFDNRDLLGFVDGTENPDGADAAAAALVGPEDPDFIGGSYVHVQK HHHHHHHHHHHCCCEEECCCCEEEEECCCCCCCCHHHHHHHEECCCCCCCCCCCHHHHHH YLHNMAAWSALPVDEQEKVIGRTKLDDVEFDDAVKPSNSHVALNVIEDEEGNELQVLRRN HHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHC MPFGELGKSEFGTYYIAYSRTPDVTERMLHNMFVGDPPGNTDRILDFSTAITGGLFFAPA CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEHHHHHHCCCCCCCC ADFLDAPPSLPAEVAIKSVEYQGSLSIGSLKGSLS HHHHCCCCCCCHHHHHEEEEECCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]