| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is eamA [H]
Identifier: 169627779
GI number: 169627779
Start: 678884
End: 679855
Strand: Reverse
Name: eamA [H]
Synonym: MAB_0677c
Alternate gene names: 169627779
Gene position: 679855-678884 (Counterclockwise)
Preceding gene: 169627781
Following gene: 169627778
Centisome position: 13.42
GC content: 67.7
Gene sequence:
>972_bases ATGACTACTCGGCACCGTCTCCTCGGATTGACCGTCGCCGTGCTGTGGGGAGTCAATTTCGTGGCCATTCACGCTGGACT GGAGCACTTCCCACCACTGTTCTTTGCGGGTCTGCGGTTCGCTGTGTTGGCGCTGCCGGTAATCCTGTTCGTTCCCTGGC CTCGGGTGCCGGTGCGATGGCTGCTGCTCTACGGACTCGGATTCGGCACCATCCAGTTCGCATTCCTGTTCCTGGCCATG GCCAACGGCATGCCGACCGGTCTGGCGTCCCTGGTCCTGCAGGCCTCCGCGCCGTTCACGGCGATCCTCGGTGTGGTGCT GCTCGGCGAGCGGATGTCCGCCGTGCAGGTCACGGGAATCTCGCTCGCGGTCGCCGGGATGGCACTCATCGCGGCCGATC GCGCCACGCATGGTGCTTCGGCCGCGGTGGTGCCGGTAGTCGTGACGCTGCTCGGCGCGCTGGGCTGGGCCTTCGGCAAC ATCGCCAGCCGAAAGGCCATGGAACACAACACCGATCCCCACACGCCCCTGCGGCTCACCCTGTGGATGTCCGTGGTGCC GCCCATCCCTCTGTTCGCCCTGTCGGCTTTTCTCGAAGGGCCGGACGCGGGCTGGAAGGCGCTCACCTCGATCGGCACAC ATAGTGGGCTGATCGCCCTGGCCGGCCTCGTCTACATCGTGGTGCTGGCCACCATCGTCGGCCTGGGCCTGTGGACGTAT CTGATGGGCCGATATCCGGCGAGCCGGGTGGCCCCGTTCTCGCTGCTGGTTCCCATCGTGGGCATCACCACGTCCTGGCT CGCACTCGGTGAGCGGCCCACCGCACTCGAACTCGTCGGAGCCGCGGTGGTGATCACAGGGTGCCTGATCGGCATGACCG CACGCCCCGCCGCCCGCGCACCCCAGCACACCGACACACCCGAGCGCGGACCGCGTGAGCTGTCTGCCTGCGCCGCCCCC GCGGGCCACTAA
Upstream 100 bases:
>100_bases GCAGAATCCGCAGGCGGCGCACATCCATGAAGTAAAACTACATGAATAGTGCATATTAATTAGATTGTGCTGAATCGTTT CGCTGCGCAGGATCGACGCC
Downstream 100 bases:
>100_bases CCTGGGGGCATGTCGAGTGTGTTCACGAAGATCATCAACGGAGAACTCCCCGGTCGGTTCGTCTACGAGGACGACGACGT CGTCGCCTTTCTGACCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MTTRHRLLGLTVAVLWGVNFVAIHAGLEHFPPLFFAGLRFAVLALPVILFVPWPRVPVRWLLLYGLGFGTIQFAFLFLAM ANGMPTGLASLVLQASAPFTAILGVVLLGERMSAVQVTGISLAVAGMALIAADRATHGASAAVVPVVVTLLGALGWAFGN IASRKAMEHNTDPHTPLRLTLWMSVVPPIPLFALSAFLEGPDAGWKALTSIGTHSGLIALAGLVYIVVLATIVGLGLWTY LMGRYPASRVAPFSLLVPIVGITTSWLALGERPTALELVGAAVVITGCLIGMTARPAARAPQHTDTPERGPRELSACAAP AGH
Sequences:
>Translated_323_residues MTTRHRLLGLTVAVLWGVNFVAIHAGLEHFPPLFFAGLRFAVLALPVILFVPWPRVPVRWLLLYGLGFGTIQFAFLFLAM ANGMPTGLASLVLQASAPFTAILGVVLLGERMSAVQVTGISLAVAGMALIAADRATHGASAAVVPVVVTLLGALGWAFGN IASRKAMEHNTDPHTPLRLTLWMSVVPPIPLFALSAFLEGPDAGWKALTSIGTHSGLIALAGLVYIVVLATIVGLGLWTY LMGRYPASRVAPFSLLVPIVGITTSWLALGERPTALELVGAAVVITGCLIGMTARPAARAPQHTDTPERGPRELSACAAP AGH >Mature_322_residues TTRHRLLGLTVAVLWGVNFVAIHAGLEHFPPLFFAGLRFAVLALPVILFVPWPRVPVRWLLLYGLGFGTIQFAFLFLAMA NGMPTGLASLVLQASAPFTAILGVVLLGERMSAVQVTGISLAVAGMALIAADRATHGASAAVVPVVVTLLGALGWAFGNI ASRKAMEHNTDPHTPLRLTLWMSVVPPIPLFALSAFLEGPDAGWKALTSIGTHSGLIALAGLVYIVVLATIVGLGLWTYL MGRYPASRVAPFSLLVPIVGITTSWLALGERPTALELVGAAVVITGCLIGMTARPAARAPQHTDTPERGPRELSACAAPA GH
Specific function: May be an export pump for cysteine and other metabolites of the cysteine pathway (such as N-acetyl-L-serine (NAS) and O- acetyl-L-serine (OAS)), and for other amino acids and their metabolites [H]
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
Organism=Escherichia coli, GI87081929, Length=287, Percent_Identity=44.2508710801394, Blast_Score=219, Evalue=3e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 33848; Mature: 33717
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRHRLLGLTVAVLWGVNFVAIHAGLEHFPPLFFAGLRFAVLALPVILFVPWPRVPVRW CCCHHHHHHHHHHHHHCCHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LLLYGLGFGTIQFAFLFLAMANGMPTGLASLVLQASAPFTAILGVVLLGERMSAVQVTGI HHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEHHH SLAVAGMALIAADRATHGASAAVVPVVVTLLGALGWAFGNIASRKAMEHNTDPHTPLRLT HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE LWMSVVPPIPLFALSAFLEGPDAGWKALTSIGTHSGLIALAGLVYIVVLATIVGLGLWTY EHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LMGRYPASRVAPFSLLVPIVGITTSWLALGERPTALELVGAAVVITGCLIGMTARPAARA HHHCCCHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC PQHTDTPERGPRELSACAAPAGH CCCCCCCCCCHHHHHHHCCCCCC >Mature Secondary Structure TTRHRLLGLTVAVLWGVNFVAIHAGLEHFPPLFFAGLRFAVLALPVILFVPWPRVPVRW CCHHHHHHHHHHHHHCCHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LLLYGLGFGTIQFAFLFLAMANGMPTGLASLVLQASAPFTAILGVVLLGERMSAVQVTGI HHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEHHH SLAVAGMALIAADRATHGASAAVVPVVVTLLGALGWAFGNIASRKAMEHNTDPHTPLRLT HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE LWMSVVPPIPLFALSAFLEGPDAGWKALTSIGTHSGLIALAGLVYIVVLATIVGLGLWTY EHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LMGRYPASRVAPFSLLVPIVGITTSWLALGERPTALELVGAAVVITGCLIGMTARPAARA HHHCCCHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC PQHTDTPERGPRELSACAAPAGH CCCCCCCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8383113; 9097039; 9278503; 10844694 [H]