| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627778
Identifier: 169627778
GI number: 169627778
Start: 678470
End: 678874
Strand: Reverse
Name: 169627778
Synonym: MAB_0676c
Alternate gene names: NA
Gene position: 678874-678470 (Counterclockwise)
Preceding gene: 169627779
Following gene: 169627775
Centisome position: 13.4
GC content: 62.22
Gene sequence:
>405_bases ATGTCGAGTGTGTTCACGAAGATCATCAACGGAGAACTCCCCGGTCGGTTCGTCTACGAGGACGACGACGTCGTCGCCTT TCTGACCATCGCCCCGATCACCCAGGGCCACACCCTGGTGGTGCCCCGCGCCGAGATCGACCAGTGGCAGGACATCGACG AGGCGCTTTTCGCGAAGGTCAATCTCGTGGCGCAGCGCATCGGCCGCGCCGTCCGCAAGGCCTTCGACGCACCGCGCGCC GGCTACATCATCGCGGGCATGGAAGTGCCACACCTACACGTACATGTTTTCCCGGGCTACCAGCTCACCGATTTCAGCTT CGAGAATGCCGATCCCAACGCTTCGGCGGAATCCCTCGACGAGGCACAGGCCAAGATCAAGGCTGCGCTGACTCAGATCG ACTAG
Upstream 100 bases:
>100_bases ACGCCCCGCCGCCCGCGCACCCCAGCACACCGACACACCCGAGCGCGGACCGCGTGAGCTGTCTGCCTGCGCCGCCCCCG CGGGCCACTAACCTGGGGGC
Downstream 100 bases:
>100_bases CCCGCACGATCTTTGGTTCGGATGCCGCGGCATCCGGCGTCGCCGATTCGGGCTCGTCCACGTCCGCGTCGTCGTCGGTC ATGTCGGCGCGCGGCAGCCG
Product: HIT-like (histidine triad) protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MSSVFTKIINGELPGRFVYEDDDVVAFLTIAPITQGHTLVVPRAEIDQWQDIDEALFAKVNLVAQRIGRAVRKAFDAPRA GYIIAGMEVPHLHVHVFPGYQLTDFSFENADPNASAESLDEAQAKIKAALTQID
Sequences:
>Translated_134_residues MSSVFTKIINGELPGRFVYEDDDVVAFLTIAPITQGHTLVVPRAEIDQWQDIDEALFAKVNLVAQRIGRAVRKAFDAPRA GYIIAGMEVPHLHVHVFPGYQLTDFSFENADPNASAESLDEAQAKIKAALTQID >Mature_133_residues SSVFTKIINGELPGRFVYEDDDVVAFLTIAPITQGHTLVVPRAEIDQWQDIDEALFAKVNLVAQRIGRAVRKAFDAPRAG YIIAGMEVPHLHVHVFPGYQLTDFSFENADPNASAESLDEAQAKIKAALTQID
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HIT domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011146 - InterPro: IPR011151 - InterPro: IPR019808 - InterPro: IPR001310 [H]
Pfam domain/function: PF01230 HIT [H]
EC number: NA
Molecular weight: Translated: 14766; Mature: 14635
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVFTKIINGELPGRFVYEDDDVVAFLTIAPITQGHTLVVPRAEIDQWQDIDEALFAKV CCHHHHHHHCCCCCCCEEEECCCEEEEEEEEECCCCCEEEEECCCCHHHCCHHHHHHHHH NLVAQRIGRAVRKAFDAPRAGYIIAGMEVPHLHVHVFPGYQLTDFSFENADPNASAESLD HHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEECCEEEECCCCCCCCCCCCHHHHH EAQAKIKAALTQID HHHHHHHHHHHCCC >Mature Secondary Structure SSVFTKIINGELPGRFVYEDDDVVAFLTIAPITQGHTLVVPRAEIDQWQDIDEALFAKV CHHHHHHHCCCCCCCEEEECCCEEEEEEEEECCCCCEEEEECCCCHHHCCHHHHHHHHH NLVAQRIGRAVRKAFDAPRAGYIIAGMEVPHLHVHVFPGYQLTDFSFENADPNASAESLD HHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEECCEEEECCCCCCCCCCCCHHHHH EAQAKIKAALTQID HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]