| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627754
Identifier: 169627754
GI number: 169627754
Start: 654110
End: 655093
Strand: Reverse
Name: 169627754
Synonym: MAB_0651c
Alternate gene names: NA
Gene position: 655093-654110 (Counterclockwise)
Preceding gene: 169627771
Following gene: 169627752
Centisome position: 12.93
GC content: 65.35
Gene sequence:
>984_bases GTGACCTATCCACCACAGGAGCCGCCTACCTCGGGCGATCCCTCAGCGTACGACCCGAATCAGCCCCCTCCGGGATATCC GAATCAGCCGCCGCCGGGGTACCAGCCACCACCACCCGGGTACCAGCCCGGGTATCAGGCCGGCCCACCCCCGGGGGGCC CTCAGTACCAGGGCGCCCAGTTCCCGCCGCCGGGCTATCCGCCGGCCGGCTACGGCTATCCCCAGCAGAGGCCGTGGCCA CCGCAGGGGCCCTTCTCTGCCGGTGAATCGTGGAGCTGGTCCTGGGCACAGGTCAGCAAGCGCTTCGGAACCTTCATTCC CCCGTACCTGGTGTGGTTCCTCGCCATCGGACTGCCGGTCGGGATCGTCTACGCCATCCTGATGGCGAGTCTCCCTCAGA CCAGCACGAGCGGCTACGGCGGAAATTCACGTTCCTCGTACTCGTATTCGTATGAGGGTCCAGAGCTTTCAGGCGGCGCC ATCGCCATCATGATCTTGCTCTACGCGGTAGTTTTCGCGGTGAGTCTCTATGTGGGCGCATGCCTCATCAGCGCCAACCT CGATGTCGCGGACGGTAAGCCGGTCAGCTTCGGGACCTTCTTCCGCGCCCGCGGTTTCGGCCTCTATGTCGGCGCCGCGC TGCTCGTGGGGGTGGGGGTTCTGATCGGTAGCCTTCTCATCATCGGTGGCGTCATCTTCGGGTTCTTCGCGCAATACGCG GTGTTCTTCGCCATCGACCGCGGCCTCGGCCCTGTCGATGCGCTCAAGGCCAGCTTCCAGCTGGTTAAGGACAATCTGGG GCAGGCGTTGGTGGTTTTCCTGATCACCCTGGGTGTCGCCTTCGGAGGCTTCGCGCTGACCTTCATCACGTGCGGTTTGG GTGGCATCATCGCCTACCCGGCAGCGGGCGCCCTGACCGGACTGATCCACGTCTACACGTACCGGCGCCTGACCGGGGGC ACCATCGCACCCGCGCCGGTGTAA
Upstream 100 bases:
>100_bases CGCGACTCGACGTCGCGCTGCCACTCCCCTCCGCCACCCGGCCCGGCGACACTCGCCGAATTCAACACTTAGCAAACTTC CCTGTTGCTAACCTAGCCGC
Downstream 100 bases:
>100_bases GCCGCCGCGCCACATGCCGAGTGGGATCTCCCGAGAAAATCGAGACGGCGTCCCGCGTCGGATTCCCACTCGGATTCCCC CTCGGCTTCCCACTCGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MTYPPQEPPTSGDPSAYDPNQPPPGYPNQPPPGYQPPPPGYQPGYQAGPPPGGPQYQGAQFPPPGYPPAGYGYPQQRPWP PQGPFSAGESWSWSWAQVSKRFGTFIPPYLVWFLAIGLPVGIVYAILMASLPQTSTSGYGGNSRSSYSYSYEGPELSGGA IAIMILLYAVVFAVSLYVGACLISANLDVADGKPVSFGTFFRARGFGLYVGAALLVGVGVLIGSLLIIGGVIFGFFAQYA VFFAIDRGLGPVDALKASFQLVKDNLGQALVVFLITLGVAFGGFALTFITCGLGGIIAYPAAGALTGLIHVYTYRRLTGG TIAPAPV
Sequences:
>Translated_327_residues MTYPPQEPPTSGDPSAYDPNQPPPGYPNQPPPGYQPPPPGYQPGYQAGPPPGGPQYQGAQFPPPGYPPAGYGYPQQRPWP PQGPFSAGESWSWSWAQVSKRFGTFIPPYLVWFLAIGLPVGIVYAILMASLPQTSTSGYGGNSRSSYSYSYEGPELSGGA IAIMILLYAVVFAVSLYVGACLISANLDVADGKPVSFGTFFRARGFGLYVGAALLVGVGVLIGSLLIIGGVIFGFFAQYA VFFAIDRGLGPVDALKASFQLVKDNLGQALVVFLITLGVAFGGFALTFITCGLGGIIAYPAAGALTGLIHVYTYRRLTGG TIAPAPV >Mature_326_residues TYPPQEPPTSGDPSAYDPNQPPPGYPNQPPPGYQPPPPGYQPGYQAGPPPGGPQYQGAQFPPPGYPPAGYGYPQQRPWPP QGPFSAGESWSWSWAQVSKRFGTFIPPYLVWFLAIGLPVGIVYAILMASLPQTSTSGYGGNSRSSYSYSYEGPELSGGAI AIMILLYAVVFAVSLYVGACLISANLDVADGKPVSFGTFFRARGFGLYVGAALLVGVGVLIGSLLIIGGVIFGFFAQYAV FFAIDRGLGPVDALKASFQLVKDNLGQALVVFLITLGVAFGGFALTFITCGLGGIIAYPAAGALTGLIHVYTYRRLTGGT IAPAPV
Specific function: Unknown
COG id: COG5473
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018692 [H]
Pfam domain/function: PF09955 DUF2189 [H]
EC number: NA
Molecular weight: Translated: 34234; Mature: 34102
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYPPQEPPTSGDPSAYDPNQPPPGYPNQPPPGYQPPPPGYQPGYQAGPPPGGPQYQGAQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC FPPPGYPPAGYGYPQQRPWPPQGPFSAGESWSWSWAQVSKRFGTFIPPYLVWFLAIGLPV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH GIVYAILMASLPQTSTSGYGGNSRSSYSYSYEGPELSGGAIAIMILLYAVVFAVSLYVGA HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH CLISANLDVADGKPVSFGTFFRARGFGLYVGAALLVGVGVLIGSLLIIGGVIFGFFAQYA HHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFFAIDRGLGPVDALKASFQLVKDNLGQALVVFLITLGVAFGGFALTFITCGLGGIIAYP HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAGALTGLIHVYTYRRLTGGTIAPAPV HHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TYPPQEPPTSGDPSAYDPNQPPPGYPNQPPPGYQPPPPGYQPGYQAGPPPGGPQYQGAQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC FPPPGYPPAGYGYPQQRPWPPQGPFSAGESWSWSWAQVSKRFGTFIPPYLVWFLAIGLPV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH GIVYAILMASLPQTSTSGYGGNSRSSYSYSYEGPELSGGAIAIMILLYAVVFAVSLYVGA HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH CLISANLDVADGKPVSFGTFFRARGFGLYVGAALLVGVGVLIGSLLIIGGVIFGFFAQYA HHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFFAIDRGLGPVDALKASFQLVKDNLGQALVVFLITLGVAFGGFALTFITCGLGGIIAYP HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAGALTGLIHVYTYRRLTGGTIAPAPV HHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]