| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627723
Identifier: 169627723
GI number: 169627723
Start: 618734
End: 619258
Strand: Reverse
Name: 169627723
Synonym: MAB_0620c
Alternate gene names: NA
Gene position: 619258-618734 (Counterclockwise)
Preceding gene: 169627724
Following gene: 169627715
Centisome position: 12.22
GC content: 65.52
Gene sequence:
>525_bases ATGACTCGCTGGACCGGCCTGATGGTGGCCGCTATTACGCTGACCACGGGCGGTATCGCCGCCTCTACCGCGGTCGCGCC AAATGTCGCATGCGCTTGCTCCTGCGTGGATGTCCGAAAGGACTCGGCATCGATCAAAGAGTGGCTGGGACACGCGCAAG CCATCTTTGTGGGCACACCCACCGACACCCAGCTGATCAGTGATCCGGAGACCGGCAGGACGATCTACCAGTTCGCTGTC CGAGAGGTCTACAAGGGCGACGTCGGGCCGACCACCACCGTCAAGGTCGAAAACTTCGGCCCGACCTGTGGTCGCAGCTA CGACATCGGCACCGAGTACTTCGTCGTGGCGGGCAAGCCCGACGAAATCCCCCACGACACCCGCCCGAACGCCCCCGCCG CCTATGGCGACAACCGATGCTCACTGACACAGGTCGCGGCCGGTTCAGATCTGCCCGGCCCCGCACAGACGGCGTACGGC ACCCCACACGCGCCGACCGGACCGGCCGTCACGCTGCCCGGATAA
Upstream 100 bases:
>100_bases CCGTTGCCATCCCACGCCCGACAGTAACTACACGCACGTTTTCTGCCGGAAATCTGTGGGTGCGGTTACGCTGGCGGCGT CGGCGGTGCATAATTTGCCC
Downstream 100 bases:
>100_bases CGCTCACTACAGATAATCGGTTTCCACCCATACAGACACCCACCAACAGCAATGCAGCCTTATAGCTCCCGGATGCCAGC GCCTAACCACTCACGAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MTRWTGLMVAAITLTTGGIAASTAVAPNVACACSCVDVRKDSASIKEWLGHAQAIFVGTPTDTQLISDPETGRTIYQFAV REVYKGDVGPTTTVKVENFGPTCGRSYDIGTEYFVVAGKPDEIPHDTRPNAPAAYGDNRCSLTQVAAGSDLPGPAQTAYG TPHAPTGPAVTLPG
Sequences:
>Translated_174_residues MTRWTGLMVAAITLTTGGIAASTAVAPNVACACSCVDVRKDSASIKEWLGHAQAIFVGTPTDTQLISDPETGRTIYQFAV REVYKGDVGPTTTVKVENFGPTCGRSYDIGTEYFVVAGKPDEIPHDTRPNAPAAYGDNRCSLTQVAAGSDLPGPAQTAYG TPHAPTGPAVTLPG >Mature_173_residues TRWTGLMVAAITLTTGGIAASTAVAPNVACACSCVDVRKDSASIKEWLGHAQAIFVGTPTDTQLISDPETGRTIYQFAVR EVYKGDVGPTTTVKVENFGPTCGRSYDIGTEYFVVAGKPDEIPHDTRPNAPAAYGDNRCSLTQVAAGSDLPGPAQTAYGT PHAPTGPAVTLPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18057; Mature: 17926
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRWTGLMVAAITLTTGGIAASTAVAPNVACACSCVDVRKDSASIKEWLGHAQAIFVGTP CCCCHHEEEEEEEEECCCCEECHHCCCCCEEEEEEEECCCCHHHHHHHHCCCEEEEEECC TDTQLISDPETGRTIYQFAVREVYKGDVGPTTTVKVENFGPTCGRSYDIGTEYFVVAGKP CCCEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEECCCCEEEEECCC DEIPHDTRPNAPAAYGDNRCSLTQVAAGSDLPGPAQTAYGTPHAPTGPAVTLPG CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCC >Mature Secondary Structure TRWTGLMVAAITLTTGGIAASTAVAPNVACACSCVDVRKDSASIKEWLGHAQAIFVGTP CCCHHEEEEEEEEECCCCEECHHCCCCCEEEEEEEECCCCHHHHHHHHCCCEEEEEECC TDTQLISDPETGRTIYQFAVREVYKGDVGPTTTVKVENFGPTCGRSYDIGTEYFVVAGKP CCCEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEECCCCEEEEECCC DEIPHDTRPNAPAAYGDNRCSLTQVAAGSDLPGPAQTAYGTPHAPTGPAVTLPG CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA