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The map label for this gene is kstR [H]

Identifier: 169627682

GI number: 169627682

Start: 579433

End: 580110

Strand: Reverse

Name: kstR [H]

Synonym: MAB_0579c

Alternate gene names: 169627682

Gene position: 580110-579433 (Counterclockwise)

Preceding gene: 169627684

Following gene: 169627681

Centisome position: 11.45

GC content: 65.49

Gene sequence:

>678_bases
ATGGCAACGCCTCGGACATCTAGCGCATCGGAAGCCGCGCAGTCAGGTGACGGCGACACCGACGCGACAAGCCAGCCAGC
CGCCGTCTCCGCACTGTCCGACGACGATCTCGGTTCGAGCGCTCAACGCGAGCGTCGCAAGCGCATCCTGGACGCCACCT
TGGCCATCGCCTCCAAGGGCGGCTACGAAGCGGTACAGATGCGCACCGTCGCCGAACGAGCCGACGTCGCCGTCGGCACC
CTGTACCGGTATTTCCCTTCCAAGGTGCACCTGCTGGTGTCGGCACTGGAGCGCGAGTTCGAACAGATCGACGCCAAATC
CGATCGCAACGCGGTCAGCGGCGGCACGCCGTACGAACGGCTGCACGCGGCCATCACCCGGCTGAACCGCAACATGCAGC
GCAATCCGTTGCTCACCGAGGCGATGACACGCGCCCTGGTGTTCGCCGACGCTTCCGCCGCCGGTGAGGTTGATCACGTG
GGCCGGTTGATGGACGGCATCTTCGCGCGAGCGATGGCCGGCGAGGACGATCCGACCGACGCGCAATTCCACATTGCTCG
CGTCATCTCAGACGTCTGGACCTCCAACATGATTGCCTGGTTGACGCGGCGAGCATCCGCAACCGACGTGAGCCACCGGC
TGGATCGCACCGTCCGCTTGCTGCTCGGCATCACCTAA

Upstream 100 bases:

>100_bases
ACGAGCCAGGGAGACCTGATTCGGCCGATAGGCATCCGTATAGTCGTGCGCTGAAACCATCGCGTGCATACGCGAGATCG
ACGGCAGGGAGTACAGACGC

Downstream 100 bases:

>100_bases
ACCACGGCGCTTGGCCAAACTGCCCCGCGCAGGTAGCGGACGTAGACTCGGGACCCGTGGTGAGTGCCCAAGATCTGCCC
GTGGAGCTGCGCCGGGCTCT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MATPRTSSASEAAQSGDGDTDATSQPAAVSALSDDDLGSSAQRERRKRILDATLAIASKGGYEAVQMRTVAERADVAVGT
LYRYFPSKVHLLVSALEREFEQIDAKSDRNAVSGGTPYERLHAAITRLNRNMQRNPLLTEAMTRALVFADASAAGEVDHV
GRLMDGIFARAMAGEDDPTDAQFHIARVISDVWTSNMIAWLTRRASATDVSHRLDRTVRLLLGIT

Sequences:

>Translated_225_residues
MATPRTSSASEAAQSGDGDTDATSQPAAVSALSDDDLGSSAQRERRKRILDATLAIASKGGYEAVQMRTVAERADVAVGT
LYRYFPSKVHLLVSALEREFEQIDAKSDRNAVSGGTPYERLHAAITRLNRNMQRNPLLTEAMTRALVFADASAAGEVDHV
GRLMDGIFARAMAGEDDPTDAQFHIARVISDVWTSNMIAWLTRRASATDVSHRLDRTVRLLLGIT
>Mature_224_residues
ATPRTSSASEAAQSGDGDTDATSQPAAVSALSDDDLGSSAQRERRKRILDATLAIASKGGYEAVQMRTVAERADVAVGTL
YRYFPSKVHLLVSALEREFEQIDAKSDRNAVSGGTPYERLHAAITRLNRNMQRNPLLTEAMTRALVFADASAAGEVDHVG
RLMDGIFARAMAGEDDPTDAQFHIARVISDVWTSNMIAWLTRRASATDVSHRLDRTVRLLLGIT

Specific function: Controls the expression of genes used for utilizing diverse lipids as energy sources [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 24404; Mature: 24272

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATPRTSSASEAAQSGDGDTDATSQPAAVSALSDDDLGSSAQRERRKRILDATLAIASKG
CCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
GYEAVQMRTVAERADVAVGTLYRYFPSKVHLLVSALEREFEQIDAKSDRNAVSGGTPYER
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
LHAAITRLNRNMQRNPLLTEAMTRALVFADASAAGEVDHVGRLMDGIFARAMAGEDDPTD
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
AQFHIARVISDVWTSNMIAWLTRRASATDVSHRLDRTVRLLLGIT
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ATPRTSSASEAAQSGDGDTDATSQPAAVSALSDDDLGSSAQRERRKRILDATLAIASKG
CCCCCCCHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
GYEAVQMRTVAERADVAVGTLYRYFPSKVHLLVSALEREFEQIDAKSDRNAVSGGTPYER
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
LHAAITRLNRNMQRNPLLTEAMTRALVFADASAAGEVDHVGRLMDGIFARAMAGEDDPTD
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
AQFHIARVISDVWTSNMIAWLTRRASATDVSHRLDRTVRLLLGIT
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA