| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is otsB [H]
Identifier: 169627681
GI number: 169627681
Start: 576842
End: 579376
Strand: Reverse
Name: otsB [H]
Synonym: MAB_0578c
Alternate gene names: 169627681
Gene position: 579376-576842 (Counterclockwise)
Preceding gene: 169627682
Following gene: 169627680
Centisome position: 11.43
GC content: 66.19
Gene sequence:
>2535_bases GTGGTGAGTGCCCAAGATCTGCCCGTGGAGCTGCGCCGGGCTCTTTCCGAGGTCGCCCGTACACCCCGACTGCTGGTGGC CTCCGACTATGACGGAACCATCGCCCCGCTGGTCAACAACCCGGACCATGCGCGCCCGCATCCCGAATCGACCACGGCCC TGCGCGCTTTGGCAGGGCTACCGTCGACGACCTCCGCGCTGATCTCCGGACGTGCGCTGCGCGATCTGGCGACCCTGTCG CGACTGCCGTCCGAGGTGCATCTGGTCGGCAGTCACGGCTCGGAGTTCGACGCCGGCTTCGTGCACGCCATCGACGGCGA CGCCAAGGCGCTGTTGAAGACCATCGCCACCAAGCTGTCGGCCATCGCCGCCGAATATCCCGGGGTGGCCATCGAACTGA AACCGGCCAGTGTCGCGCTCCACGTGCGCAACGCATCCGAGGAGGACGCCGACGCCGCCTTGAGACAGGCACTCTCCGTC GCAAACGGCTGGGGCGCGCAGGTCACCGAGGGCAAGAAGGTTCTCGAGTTCGCCGTCATCCCCACGGATAAGGGCCAGGC CCTCGACATCCTGCGCCATCAGGAGGGTGCGACCGCCGCGGTGTTCTTCGGCGACGACGTCACCGACGAAAAGGCCTTCA AGCGGCTGCACGGCCCCGATGTGGGCGTCAAGGTGGGGGATGGCGAAACACTCGCCGGCTATCGCATCCCGGACACAGAA TCGGTGGGCACAGCACTGGCTTTCCTGCTCGAGGAGCGACGCACGTGGCTGCTCGGCGGACATGCCACCCCCATCGAACG TCTCACCATGCTCGCCAATTCGCGCACCATCGCACTGGTGACGCCCACCGGCGATGTCACCTGGATGTGTCACCCCGAAC CGGATTCTGCGGCGGTGTTCGCCCATCTACTCGGCGGGCCCGAGGCAGGACACTTCACGATTGGCCCCGCGCGATCCGCG CTACCGCTGGGCCAGAAATACATCGACAGCACAATGACCGTCGAAACACGTTGGGCCAGTCTGCAAGTAACCGACTACCT GGCCCATGACGAGGTTCCCGGACGCACCGACCTCATTCGGGTCGTCACCGGCGAGGCCGATGCGGTGGTGACCTTCGCGC CGCGTCCGGAATTCGGCCAGGCCCCGGTACAGCTGGTGGCCGAGGCCGACGGCCTGCGAGTACTGGGCACCAACGATCCG ATTGTGCTGCGAGCGCCCGGCGTCACCTGGACGATCGGGGCCGACGACCAGACCGCGACCGCGACCATCAGCCCCGCCAA CGGGCCCATCATTCTCGAGCTACGTTGTGGCACAGAAGACCTCGGTGAGAATCCCACATCTGAGCCCGAGCTGCGGGAAC GGGCCGAGTCATATTGGCGCGATTGGGCACAGACCCTGACGCTGCCCGAACGCAAGCCGGGCCTGATGAAGCGGTCGGCA CTGACGTTGCGGGGCCTGGTGCATGCCGAGTCGGGCGCGATCCTGGCCGCGGCCACCACCTCACTTCCGGAAGACATCGG CGGAATCCGTAACTGGGACTACCGGTACTGCTGGCTGCGCGATGCGTCGATGACCGCGTCGGCGCTGGTCGCATTGGGAT CCCTGAGCGAGGCAGAGGGCCTGCTGGGTTGGCTACACAGGGTACTAGAGCATCTGCCAGGACCCGACCGTCTGCACCCG CTCTACACACTGGCCGGCACGGCGCTGCCTCCAGAGGCGGTGATCGACTCACTGCCGGGGTATGCGGGCTCGCGACCGGT TCGTGTCGGCAACGCCGCCAATTCGCAAGTGCAGCTGGATGTATTCGGCCCCGTGGTGGAACTGATCCACGATCTGAGCC ACGCCCGCAAGCATCTCGGGCATTCCGATCCGCTGACCGATGCCGACTGGAACCTGGTGTCCGACATGGTTCTTGCCGTC GAACGCCGATGGTACGAGCCCGATCACGGCATCTGGGAAATCCGCGGGAATCCGCGCCACCACGTCTACTCCAAGGTGAT GTGCTGGGTAACGGTGGACCGTGCCGTGAAGTTGGCCGAGGAGTTCGAGCGTGCGGCCCCGTCATCGTGGGCGGCGCTGC GCGATGAAATCGCCGCCGAGGTCATCGAGAAGGGCTGGAACGAGTCGGTCAACTCCTACACCGCCGCCTACGACGGCACC GATCTGGACGCCGCAACCCTGTACATCGGCCTATCCGGGCTGATCGACCCCACCGATCCTCGATTCACCGCGACGGTCAT CGCCACCGAGGCAGAACTGCGCAGTGGTGCGACGGTCTACCGCTACCACCGCGATGACTGCCTACCCGGAGGCGAAGGCG GATTCCATTTGTGCGCGGCCTGGCTGGTCGAGGCCTATCTGCTCATCGGTGCGCGATCGCAGGCCGAGCTGCTCTTCGAT CAGCTGGTCAAGGCCACCGGCCCCACCGGTCTGCTGTCGGAGGAGTACGACCCGGTGGCCGAGCGCTCGCTGGGTAACCA CCCCCAGGCCTACAGCCATATCGGGCTGCTGCGCTGCGCCGCCCTGCTGTCCTGA
Upstream 100 bases:
>100_bases ACCGGCTGGATCGCACCGTCCGCTTGCTGCTCGGCATCACCTAAACCACGGCGCTTGGCCAAACTGCCCCGCGCAGGTAG CGGACGTAGACTCGGGACCC
Downstream 100 bases:
>100_bases CCGCAGCGGCCGGGCCGCATGCAGCTCAGCGAATTCTGGCCGGTTTTGCACAGATACCACTCCATGCCCCATAATGAAAA TCGTTTTCATTACTGGGATT
Product: putative trehalose phosphatase
Products: NA
Alternate protein names: TPP; Osmoregulatory trehalose synthesis protein B; Trehalose 6-phosphate phosphatase; Trehalose-phosphatase [H]
Number of amino acids: Translated: 844; Mature: 844
Protein sequence:
>844_residues MVSAQDLPVELRRALSEVARTPRLLVASDYDGTIAPLVNNPDHARPHPESTTALRALAGLPSTTSALISGRALRDLATLS RLPSEVHLVGSHGSEFDAGFVHAIDGDAKALLKTIATKLSAIAAEYPGVAIELKPASVALHVRNASEEDADAALRQALSV ANGWGAQVTEGKKVLEFAVIPTDKGQALDILRHQEGATAAVFFGDDVTDEKAFKRLHGPDVGVKVGDGETLAGYRIPDTE SVGTALAFLLEERRTWLLGGHATPIERLTMLANSRTIALVTPTGDVTWMCHPEPDSAAVFAHLLGGPEAGHFTIGPARSA LPLGQKYIDSTMTVETRWASLQVTDYLAHDEVPGRTDLIRVVTGEADAVVTFAPRPEFGQAPVQLVAEADGLRVLGTNDP IVLRAPGVTWTIGADDQTATATISPANGPIILELRCGTEDLGENPTSEPELRERAESYWRDWAQTLTLPERKPGLMKRSA LTLRGLVHAESGAILAAATTSLPEDIGGIRNWDYRYCWLRDASMTASALVALGSLSEAEGLLGWLHRVLEHLPGPDRLHP LYTLAGTALPPEAVIDSLPGYAGSRPVRVGNAANSQVQLDVFGPVVELIHDLSHARKHLGHSDPLTDADWNLVSDMVLAV ERRWYEPDHGIWEIRGNPRHHVYSKVMCWVTVDRAVKLAEEFERAAPSSWAALRDEIAAEVIEKGWNESVNSYTAAYDGT DLDAATLYIGLSGLIDPTDPRFTATVIATEAELRSGATVYRYHRDDCLPGGEGGFHLCAAWLVEAYLLIGARSQAELLFD QLVKATGPTGLLSEEYDPVAERSLGNHPQAYSHIGLLRCAALLS
Sequences:
>Translated_844_residues MVSAQDLPVELRRALSEVARTPRLLVASDYDGTIAPLVNNPDHARPHPESTTALRALAGLPSTTSALISGRALRDLATLS RLPSEVHLVGSHGSEFDAGFVHAIDGDAKALLKTIATKLSAIAAEYPGVAIELKPASVALHVRNASEEDADAALRQALSV ANGWGAQVTEGKKVLEFAVIPTDKGQALDILRHQEGATAAVFFGDDVTDEKAFKRLHGPDVGVKVGDGETLAGYRIPDTE SVGTALAFLLEERRTWLLGGHATPIERLTMLANSRTIALVTPTGDVTWMCHPEPDSAAVFAHLLGGPEAGHFTIGPARSA LPLGQKYIDSTMTVETRWASLQVTDYLAHDEVPGRTDLIRVVTGEADAVVTFAPRPEFGQAPVQLVAEADGLRVLGTNDP IVLRAPGVTWTIGADDQTATATISPANGPIILELRCGTEDLGENPTSEPELRERAESYWRDWAQTLTLPERKPGLMKRSA LTLRGLVHAESGAILAAATTSLPEDIGGIRNWDYRYCWLRDASMTASALVALGSLSEAEGLLGWLHRVLEHLPGPDRLHP LYTLAGTALPPEAVIDSLPGYAGSRPVRVGNAANSQVQLDVFGPVVELIHDLSHARKHLGHSDPLTDADWNLVSDMVLAV ERRWYEPDHGIWEIRGNPRHHVYSKVMCWVTVDRAVKLAEEFERAAPSSWAALRDEIAAEVIEKGWNESVNSYTAAYDGT DLDAATLYIGLSGLIDPTDPRFTATVIATEAELRSGATVYRYHRDDCLPGGEGGFHLCAAWLVEAYLLIGARSQAELLFD QLVKATGPTGLLSEEYDPVAERSLGNHPQAYSHIGLLRCAALLS >Mature_844_residues MVSAQDLPVELRRALSEVARTPRLLVASDYDGTIAPLVNNPDHARPHPESTTALRALAGLPSTTSALISGRALRDLATLS RLPSEVHLVGSHGSEFDAGFVHAIDGDAKALLKTIATKLSAIAAEYPGVAIELKPASVALHVRNASEEDADAALRQALSV ANGWGAQVTEGKKVLEFAVIPTDKGQALDILRHQEGATAAVFFGDDVTDEKAFKRLHGPDVGVKVGDGETLAGYRIPDTE SVGTALAFLLEERRTWLLGGHATPIERLTMLANSRTIALVTPTGDVTWMCHPEPDSAAVFAHLLGGPEAGHFTIGPARSA LPLGQKYIDSTMTVETRWASLQVTDYLAHDEVPGRTDLIRVVTGEADAVVTFAPRPEFGQAPVQLVAEADGLRVLGTNDP IVLRAPGVTWTIGADDQTATATISPANGPIILELRCGTEDLGENPTSEPELRERAESYWRDWAQTLTLPERKPGLMKRSA LTLRGLVHAESGAILAAATTSLPEDIGGIRNWDYRYCWLRDASMTASALVALGSLSEAEGLLGWLHRVLEHLPGPDRLHP LYTLAGTALPPEAVIDSLPGYAGSRPVRVGNAANSQVQLDVFGPVVELIHDLSHARKHLGHSDPLTDADWNLVSDMVLAV ERRWYEPDHGIWEIRGNPRHHVYSKVMCWVTVDRAVKLAEEFERAAPSSWAALRDEIAAEVIEKGWNESVNSYTAAYDGT DLDAATLYIGLSGLIDPTDPRFTATVIATEAELRSGATVYRYHRDDCLPGGEGGFHLCAAWLVEAYLLIGARSQAELLFD QLVKATGPTGLLSEEYDPVAERSLGNHPQAYSHIGLLRCAALLS
Specific function: Removes the phosphate from trehalose 6-phosphate to produce free trehalose [H]
COG id: COG3387
COG function: function code G; Glucoamylase and related glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trehalose phosphatase family [H]
Homologues:
Organism=Escherichia coli, GI1788207, Length=246, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=8e-19, Organism=Drosophila melanogaster, GI19920676, Length=252, Percent_Identity=28.968253968254, Blast_Score=75, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR003337 [H]
Pfam domain/function: PF02358 Trehalose_PPase [H]
EC number: =3.1.3.12 [H]
Molecular weight: Translated: 90814; Mature: 90814
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSAQDLPVELRRALSEVARTPRLLVASDYDGTIAPLVNNPDHARPHPESTTALRALAGL CCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHCC PSTTSALISGRALRDLATLSRLPSEVHLVGSHGSEFDAGFVHAIDGDAKALLKTIATKLS CCHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHH AIAAEYPGVAIELKPASVALHVRNASEEDADAALRQALSVANGWGAQVTEGKKVLEFAVI HHHHHCCCEEEEEECCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEE PTDKGQALDILRHQEGATAAVFFGDDVTDEKAFKRLHGPDVGVKVGDGETLAGYRIPDTE ECCCCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCCEEEECCCCEECCEECCCCH SVGTALAFLLEERRTWLLGGHATPIERLTMLANSRTIALVTPTGDVTWMCHPEPDSAAVF HHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCHHHHH AHLLGGPEAGHFTIGPARSALPLGQKYIDSTMTVETRWASLQVTDYLAHDEVPGRTDLIR HHHHCCCCCCCEEECCCCCCCCCCHHHHCCCEEEEEEEEEEEEEHHHHCCCCCCCCCEEE VVTGEADAVVTFAPRPEFGQAPVQLVAEADGLRVLGTNDPIVLRAPGVTWTIGADDQTAT EEECCCCEEEEECCCCCCCCCHHHHEECCCCEEEEECCCCEEEEECCEEEEECCCCCCCE ATISPANGPIILELRCGTEDLGENPTSEPELRERAESYWRDWAQTLTLPERKPGLMKRSA EEEECCCCCEEEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH LTLRGLVHAESGAILAAATTSLPEDIGGIRNWDYRYCWLRDASMTASALVALGSLSEAEG HHHHHEEECCCCCEEEEECCCCHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHH LLGWLHRVLEHLPGPDRLHPLYTLAGTALPPEAVIDSLPGYAGSRPVRVGNAANSQVQLD HHHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCEEEEE VFGPVVELIHDLSHARKHLGHSDPLTDADWNLVSDMVLAVERRWYEPDHGIWEIRGNPRH EHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCH HVYSKVMCWVTVDRAVKLAEEFERAAPSSWAALRDEIAAEVIEKGWNESVNSYTAAYDGT HHHHHHHEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC DLDAATLYIGLSGLIDPTDPRFTATVIATEAELRSGATVYRYHRDDCLPGGEGGFHLCAA CCCCEEEEEECCCCCCCCCCCEEEEEEEEHHHHHCCCEEEEEECCCCCCCCCCHHHHHHH WLVEAYLLIGARSQAELLFDQLVKATGPTGLLSEEYDPVAERSLGNHPQAYSHIGLLRCA HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHH ALLS HHCC >Mature Secondary Structure MVSAQDLPVELRRALSEVARTPRLLVASDYDGTIAPLVNNPDHARPHPESTTALRALAGL CCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHCC PSTTSALISGRALRDLATLSRLPSEVHLVGSHGSEFDAGFVHAIDGDAKALLKTIATKLS CCHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHH AIAAEYPGVAIELKPASVALHVRNASEEDADAALRQALSVANGWGAQVTEGKKVLEFAVI HHHHHCCCEEEEEECCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEE PTDKGQALDILRHQEGATAAVFFGDDVTDEKAFKRLHGPDVGVKVGDGETLAGYRIPDTE ECCCCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCCEEEECCCCEECCEECCCCH SVGTALAFLLEERRTWLLGGHATPIERLTMLANSRTIALVTPTGDVTWMCHPEPDSAAVF HHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCHHHHH AHLLGGPEAGHFTIGPARSALPLGQKYIDSTMTVETRWASLQVTDYLAHDEVPGRTDLIR HHHHCCCCCCCEEECCCCCCCCCCHHHHCCCEEEEEEEEEEEEEHHHHCCCCCCCCCEEE VVTGEADAVVTFAPRPEFGQAPVQLVAEADGLRVLGTNDPIVLRAPGVTWTIGADDQTAT EEECCCCEEEEECCCCCCCCCHHHHEECCCCEEEEECCCCEEEEECCEEEEECCCCCCCE ATISPANGPIILELRCGTEDLGENPTSEPELRERAESYWRDWAQTLTLPERKPGLMKRSA EEEECCCCCEEEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH LTLRGLVHAESGAILAAATTSLPEDIGGIRNWDYRYCWLRDASMTASALVALGSLSEAEG HHHHHEEECCCCCEEEEECCCCHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHH LLGWLHRVLEHLPGPDRLHPLYTLAGTALPPEAVIDSLPGYAGSRPVRVGNAANSQVQLD HHHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCEEEEE VFGPVVELIHDLSHARKHLGHSDPLTDADWNLVSDMVLAVERRWYEPDHGIWEIRGNPRH EHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCH HVYSKVMCWVTVDRAVKLAEEFERAAPSSWAALRDEIAAEVIEKGWNESVNSYTAAYDGT HHHHHHHEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC DLDAATLYIGLSGLIDPTDPRFTATVIATEAELRSGATVYRYHRDDCLPGGEGGFHLCAA CCCCEEEEEECCCCCCCCCCCEEEEEEEEHHHHHCCCEEEEEECCCCCCCCCCHHHHHHH WLVEAYLLIGARSQAELLFDQLVKATGPTGLLSEEYDPVAERSLGNHPQAYSHIGLLRCA HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHH ALLS HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8045430; 9097040; 9278503 [H]