Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

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The map label for this gene is yadT [C]

Identifier: 169627651

GI number: 169627651

Start: 549539

End: 550531

Strand: Reverse

Name: yadT [C]

Synonym: MAB_0547c

Alternate gene names: 169627651

Gene position: 550531-549539 (Counterclockwise)

Preceding gene: 169627652

Following gene: 169627635

Centisome position: 10.86

GC content: 63.65

Gene sequence:

>993_bases
ATGAAGGCACTCATCGGCTCGGTCGCGGCGCTGGCGCTGCTCACGACGAGCTGCGCAACGATCGACGAGGCAAGCACCGC
AACCGATCACGTGTCCGTCGACAATTGTGGTGCGCCTCTCCAGGTTCCGGTGCCGGTAACCCGGGTCGTCAGCAACGACA
CCGGGGTTACCGAGCTGCTATTCGCGCTGGGCCTGCAGGATCGGATGGCAGGCTACTTTCTGGACTCCGGGCAGGATCGG
GACATCAGCACATCGCCCTGGAAGGCACAATTCGAGTCCACCACGAACCTGGGACAAGGATTTACCCGTGAGGCCGTGCA
GACCGCGCGGCCCGATCTCGTTTTCGCCGGATGGAATTACGGATTCAGCGAAACCTCGGGGTTGACCCCGGATTGGGTGC
GGTCCATCGGGGCGGTGCCCTATCAGCTGACAGAGGCCTGCCGGCAGTCCGGCACCGCGCGACGCGGAATCAAGGCGCCC
CTGGAGGCCCTCTACGAAGACCTCACCAACTTAGGGATCATCTTCGGGGTCCAGGACCGGGCGCGTGACCTGATCGCCTC
ATACCGCCAGACCATCGAAGACGTGCAGTCCCACGCCCCGCACGAGCAGGCACCCGTACGTGTCTTCCTATATGACAGCG
GTGATGCCGAGCCGTTCACGTCGGGTAGGACGGCGGCGCCGCAGCAGATCATCGAGAAGGCAGGCGGCCGCAATATATTC
TCCGATCTCAACGACAGTTGGACCACCAGCGCCTGGGAAACCGCGGCCCAGCGAGACCCGCAGGTGATCATCGTCTGCGA
CTACGGCGTGGGGCCCAACAACACCGCACAGGCAAAGATCGACCTGCTCAAGGCGCAACCGCTGATGCGGCACACCCAGG
CGGTACGAGACGAAAACTTCATCGTGCTGCCCTACGCCGCACTCGTCGAAGGGCCACGCAACCCCGACGCCATCGTCACC
CTGGCGAACTACCTGCGCAGCAAGGGATTCTGA

Upstream 100 bases:

>100_bases
TCGGCCGGTGGTTCGGCATCGACTGCCACGTCATCACACATCCACGCAGCGGCGTCCCGCAGGTCATCTTTTACGCCGAA
CCAGAACGACAGGAGAAGCA

Downstream 100 bases:

>100_bases
GCCCCTGTACCGACGCGCCCCTGTACCGACGCGGCGAAACTACGGTTTTTGACGCATCGCCCGAGATACGGGCTCCAAAC
GCGGCGTGTCGGCGCGGAAG

Product: putative iron compound ABC transporter, substrate-binding protein

Products: NA

Alternate protein names: Iron Transport Lipoprotein; Iron ABC Transporter; Transporter Subunit; Fe3+-Hydroxamate ABC Transporter Periplasmic Protein; Vitamin

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MKALIGSVAALALLTTSCATIDEASTATDHVSVDNCGAPLQVPVPVTRVVSNDTGVTELLFALGLQDRMAGYFLDSGQDR
DISTSPWKAQFESTTNLGQGFTREAVQTARPDLVFAGWNYGFSETSGLTPDWVRSIGAVPYQLTEACRQSGTARRGIKAP
LEALYEDLTNLGIIFGVQDRARDLIASYRQTIEDVQSHAPHEQAPVRVFLYDSGDAEPFTSGRTAAPQQIIEKAGGRNIF
SDLNDSWTTSAWETAAQRDPQVIIVCDYGVGPNNTAQAKIDLLKAQPLMRHTQAVRDENFIVLPYAALVEGPRNPDAIVT
LANYLRSKGF

Sequences:

>Translated_330_residues
MKALIGSVAALALLTTSCATIDEASTATDHVSVDNCGAPLQVPVPVTRVVSNDTGVTELLFALGLQDRMAGYFLDSGQDR
DISTSPWKAQFESTTNLGQGFTREAVQTARPDLVFAGWNYGFSETSGLTPDWVRSIGAVPYQLTEACRQSGTARRGIKAP
LEALYEDLTNLGIIFGVQDRARDLIASYRQTIEDVQSHAPHEQAPVRVFLYDSGDAEPFTSGRTAAPQQIIEKAGGRNIF
SDLNDSWTTSAWETAAQRDPQVIIVCDYGVGPNNTAQAKIDLLKAQPLMRHTQAVRDENFIVLPYAALVEGPRNPDAIVT
LANYLRSKGF
>Mature_330_residues
MKALIGSVAALALLTTSCATIDEASTATDHVSVDNCGAPLQVPVPVTRVVSNDTGVTELLFALGLQDRMAGYFLDSGQDR
DISTSPWKAQFESTTNLGQGFTREAVQTARPDLVFAGWNYGFSETSGLTPDWVRSIGAVPYQLTEACRQSGTARRGIKAP
LEALYEDLTNLGIIFGVQDRARDLIASYRQTIEDVQSHAPHEQAPVRVFLYDSGDAEPFTSGRTAAPQQIIEKAGGRNIF
SDLNDSWTTSAWETAAQRDPQVIIVCDYGVGPNNTAQAKIDLLKAQPLMRHTQAVRDENFIVLPYAALVEGPRNPDAIVT
LANYLRSKGF

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35795; Mature: 35795

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALIGSVAALALLTTSCATIDEASTATDHVSVDNCGAPLQVPVPVTRVVSNDTGVTELL
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCEECCCCHHHHHCCCCCHHHHH
FALGLQDRMAGYFLDSGQDRDISTSPWKAQFESTTNLGQGFTREAVQTARPDLVFAGWNY
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHCCCCCHHHHHHHHCCCCEEEECCCC
GFSETSGLTPDWVRSIGAVPYQLTEACRQSGTARRGIKAPLEALYEDLTNLGIIFGVQDR
CCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHCEEEEECHHH
ARDLIASYRQTIEDVQSHAPHEQAPVRVFLYDSGDAEPFTSGRTAAPQQIIEKAGGRNIF
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCHH
SDLNDSWTTSAWETAAQRDPQVIIVCDYGVGPNNTAQAKIDLLKAQPLMRHTQAVRDENF
HHCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCE
IVLPYAALVEGPRNPDAIVTLANYLRSKGF
EEEEHHHHHCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKALIGSVAALALLTTSCATIDEASTATDHVSVDNCGAPLQVPVPVTRVVSNDTGVTELL
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCEECCCCHHHHHCCCCCHHHHH
FALGLQDRMAGYFLDSGQDRDISTSPWKAQFESTTNLGQGFTREAVQTARPDLVFAGWNY
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHCCCCCHHHHHHHHCCCCEEEECCCC
GFSETSGLTPDWVRSIGAVPYQLTEACRQSGTARRGIKAPLEALYEDLTNLGIIFGVQDR
CCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHCEEEEECHHH
ARDLIASYRQTIEDVQSHAPHEQAPVRVFLYDSGDAEPFTSGRTAAPQQIIEKAGGRNIF
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCHH
SDLNDSWTTSAWETAAQRDPQVIIVCDYGVGPNNTAQAKIDLLKAQPLMRHTQAVRDENF
HHCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCE
IVLPYAALVEGPRNPDAIVTLANYLRSKGF
EEEEHHHHHCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA