| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627635
Identifier: 169627635
GI number: 169627635
Start: 531912
End: 533480
Strand: Reverse
Name: 169627635
Synonym: MAB_0531c
Alternate gene names: NA
Gene position: 533480-531912 (Counterclockwise)
Preceding gene: 169627651
Following gene: 169627633
Centisome position: 10.53
GC content: 65.77
Gene sequence:
>1569_bases TTGGCCGCCGTTGCCCTCCTGCTCGGCGGGCTTGGGTTTTTCGCCTATGAGAAGTTATCCGAGCGATGCGGTGACGTTCG GACCGTCGCCGTCTCCGCCGACCCGGCGATCACTCCGGCCGTGTCGAAGGCGATTGACGGCGCCGGTGCCAAGGAATTGG GCTGCGCACAATTCACCGTGACCGCCAAACCCTCCGCCACCACCGCCGCGACCATCGGCAAGCCCGGCGGCGCACCCGCG CTGTGGCTCCCCGATTCGTCCCTGTGGCTGGCCAGGCAGATGCGTGCCACCGGCGCAGCACTGGACTCGGCAAGTCAATC GGTGGCCAGAACCCCGATCGTGGTGGCGGCCAAACCGGGTCAGACCCCAACCTTCGACTCGTGGTTGAGCGTGTTGAAGC AGCCGGGTCTGCGAATCGGCAATCCGCTGGAAGACTCCGTCTCGGCCGGCCCCGTGCTGGGCGCCCTCGCCGAGGCCGAA CAGGGCAAGAGCGATCCCAACGCCATCACCGCAGCGCTCGTTCCGGTTGCCCAAGCGCAACTGACCAACACCAAGCAGAG CAGCGTGCAGGAACGGCTCGAAGAGGTGGCCAAAACCGGCGGTCTGGCGGTCTCAACAGAGCAACAGCTGCTCGACTACA ACGCCAAGCACCCGGACACCACGCTCGCCGCCCTCGTTCCGGCGACCGGCGCACCCACCCTGAACTATCCGATTGCCGTG ACCGAACCCGCCAACGACCGGCATGCCGATGCGAAACGCTCCGGCGAGGTGCTCGCTGAACGCCTCTCGGGCGACCGCGG GAGAGAGGCCTTGGCGGCCGCCGGTTTCCGCGGGCCGGATTTCGCACCACTGCAGGGCAATGGCGTCGGCGCCGTGGAAG CGCTCACCGTCAACGACTTGACGGCATTCGATACGGCAATGCGCCGATACGCGGTGCTGGCCTTGCCTTCCCGCATGCTT GCCGTGCTTGACGTGTCCGGCTCGATGAAATTCTCCGCCGGTCCGACCACGCGTGTCGGCCTGCTTAGCCAGGCAATCGA CAACGGCCTTCCGTTGTTTCCGGAGAACGCGCAGATCGGCCTGTGGGCCTTCTCGATCGACAAGGGTGGCCCCGGCCAGG ACTGGAAGGAACTGCTCCCCATCCGCACGCTCGGCGAGAAAGTCGGCGACAAGACTCAACGCCAGCTGCTGGCCGATGAA GGCCACGGCCTGGACGCACTGGTCGGCGGTGGGACCGGCCTGTATGACACCGCGCGCGCGGCGTTCCGCAAGGTGCAGTC GACCTACGACCCCCACTACATCAACAGCGTGGTGATCATCACGGACGGCTCGAACGAGGATCCCAACGGCATCTCACTGG AGCAACTACTCGCGACGCTCAAGAAGGAGCAGGATCCGGCACGACCCGTCGTCCTGATCACCCTGGGCATCACCGAGGAT GCCGATGCCACTGTCCTCAAACAGATTTCGGACGCCACACCGGGTGCCGGCAGCCGAGTCGCACGTAACGCGGATGAGAT TCCCAACATCGTGATCGACCTCATCAAGGCCCGGACCACGGCGCGCTAA
Upstream 100 bases:
>100_bases CCGAGAACGAAGAGGTCCAGTCATGCCTGGTCGCCACAGTGAACGCCATCGCAGAAGGCAACAACACTCAGGGGGCTTAG GCCTGACCAAGTGGATCGCG
Downstream 100 bases:
>100_bases ATGAAGACCGCCTCCGGTTGTGGCGGATCCGCGAGCAGCGTGGGCAGGACGAAGACCCTTACGTAACGCCGAACCTGCTC GGGATCGTCGGTTCCCGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 522; Mature: 521
Protein sequence:
>522_residues MAAVALLLGGLGFFAYEKLSERCGDVRTVAVSADPAITPAVSKAIDGAGAKELGCAQFTVTAKPSATTAATIGKPGGAPA LWLPDSSLWLARQMRATGAALDSASQSVARTPIVVAAKPGQTPTFDSWLSVLKQPGLRIGNPLEDSVSAGPVLGALAEAE QGKSDPNAITAALVPVAQAQLTNTKQSSVQERLEEVAKTGGLAVSTEQQLLDYNAKHPDTTLAALVPATGAPTLNYPIAV TEPANDRHADAKRSGEVLAERLSGDRGREALAAAGFRGPDFAPLQGNGVGAVEALTVNDLTAFDTAMRRYAVLALPSRML AVLDVSGSMKFSAGPTTRVGLLSQAIDNGLPLFPENAQIGLWAFSIDKGGPGQDWKELLPIRTLGEKVGDKTQRQLLADE GHGLDALVGGGTGLYDTARAAFRKVQSTYDPHYINSVVIITDGSNEDPNGISLEQLLATLKKEQDPARPVVLITLGITED ADATVLKQISDATPGAGSRVARNADEIPNIVIDLIKARTTAR
Sequences:
>Translated_522_residues MAAVALLLGGLGFFAYEKLSERCGDVRTVAVSADPAITPAVSKAIDGAGAKELGCAQFTVTAKPSATTAATIGKPGGAPA LWLPDSSLWLARQMRATGAALDSASQSVARTPIVVAAKPGQTPTFDSWLSVLKQPGLRIGNPLEDSVSAGPVLGALAEAE QGKSDPNAITAALVPVAQAQLTNTKQSSVQERLEEVAKTGGLAVSTEQQLLDYNAKHPDTTLAALVPATGAPTLNYPIAV TEPANDRHADAKRSGEVLAERLSGDRGREALAAAGFRGPDFAPLQGNGVGAVEALTVNDLTAFDTAMRRYAVLALPSRML AVLDVSGSMKFSAGPTTRVGLLSQAIDNGLPLFPENAQIGLWAFSIDKGGPGQDWKELLPIRTLGEKVGDKTQRQLLADE GHGLDALVGGGTGLYDTARAAFRKVQSTYDPHYINSVVIITDGSNEDPNGISLEQLLATLKKEQDPARPVVLITLGITED ADATVLKQISDATPGAGSRVARNADEIPNIVIDLIKARTTAR >Mature_521_residues AAVALLLGGLGFFAYEKLSERCGDVRTVAVSADPAITPAVSKAIDGAGAKELGCAQFTVTAKPSATTAATIGKPGGAPAL WLPDSSLWLARQMRATGAALDSASQSVARTPIVVAAKPGQTPTFDSWLSVLKQPGLRIGNPLEDSVSAGPVLGALAEAEQ GKSDPNAITAALVPVAQAQLTNTKQSSVQERLEEVAKTGGLAVSTEQQLLDYNAKHPDTTLAALVPATGAPTLNYPIAVT EPANDRHADAKRSGEVLAERLSGDRGREALAAAGFRGPDFAPLQGNGVGAVEALTVNDLTAFDTAMRRYAVLALPSRMLA VLDVSGSMKFSAGPTTRVGLLSQAIDNGLPLFPENAQIGLWAFSIDKGGPGQDWKELLPIRTLGEKVGDKTQRQLLADEG HGLDALVGGGTGLYDTARAAFRKVQSTYDPHYINSVVIITDGSNEDPNGISLEQLLATLKKEQDPARPVVLITLGITEDA DATVLKQISDATPGAGSRVARNADEIPNIVIDLIKARTTAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002035 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54224; Mature: 54093
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVALLLGGLGFFAYEKLSERCGDVRTVAVSADPAITPAVSKAIDGAGAKELGCAQFTV CHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCEEEEE TAKPSATTAATIGKPGGAPALWLPDSSLWLARQMRATGAALDSASQSVARTPIVVAAKPG ECCCCCCCEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC QTPTFDSWLSVLKQPGLRIGNPLEDSVSAGPVLGALAEAEQGKSDPNAITAALVPVAQAQ CCCCHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LTNTKQSSVQERLEEVAKTGGLAVSTEQQLLDYNAKHPDTTLAALVPATGAPTLNYPIAV HCCCHHHHHHHHHHHHHHHCCEEEECHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEE TEPANDRHADAKRSGEVLAERLSGDRGREALAAAGFRGPDFAPLQGNGVGAVEALTVNDL ECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCH TAFDTAMRRYAVLALPSRMLAVLDVSGSMKFSAGPTTRVGLLSQAIDNGLPLFPENAQIG HHHHHHHHHHHHHHHHHHEEEEEECCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEE LWAFSIDKGGPGQDWKELLPIRTLGEKVGDKTQRQLLADEGHGLDALVGGGTGLYDTARA EEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHH AFRKVQSTYDPHYINSVVIITDGSNEDPNGISLEQLLATLKKEQDPARPVVLITLGITED HHHHHHHCCCCHHHCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCC ADATVLKQISDATPGAGSRVARNADEIPNIVIDLIKARTTAR CHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AAVALLLGGLGFFAYEKLSERCGDVRTVAVSADPAITPAVSKAIDGAGAKELGCAQFTV HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCEEEEE TAKPSATTAATIGKPGGAPALWLPDSSLWLARQMRATGAALDSASQSVARTPIVVAAKPG ECCCCCCCEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC QTPTFDSWLSVLKQPGLRIGNPLEDSVSAGPVLGALAEAEQGKSDPNAITAALVPVAQAQ CCCCHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LTNTKQSSVQERLEEVAKTGGLAVSTEQQLLDYNAKHPDTTLAALVPATGAPTLNYPIAV HCCCHHHHHHHHHHHHHHHCCEEEECHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEE TEPANDRHADAKRSGEVLAERLSGDRGREALAAAGFRGPDFAPLQGNGVGAVEALTVNDL ECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCH TAFDTAMRRYAVLALPSRMLAVLDVSGSMKFSAGPTTRVGLLSQAIDNGLPLFPENAQIG HHHHHHHHHHHHHHHHHHEEEEEECCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEE LWAFSIDKGGPGQDWKELLPIRTLGEKVGDKTQRQLLADEGHGLDALVGGGTGLYDTARA EEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHH AFRKVQSTYDPHYINSVVIITDGSNEDPNGISLEQLLATLKKEQDPARPVVLITLGITED HHHHHHHCCCCHHHCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCC ADATVLKQISDATPGAGSRVARNADEIPNIVIDLIKARTTAR CHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]