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The map label for this gene is panD [H]

Identifier: 169627646

GI number: 169627646

Start: 543238

End: 543663

Strand: Direct

Name: panD [H]

Synonym: MAB_0542

Alternate gene names: 169627646

Gene position: 543238-543663 (Clockwise)

Preceding gene: 169627645

Following gene: 169627647

Centisome position: 10.72

GC content: 61.27

Gene sequence:

>426_bases
ATGATGTTCCGCACGATGATGAAGTCGAAGATCCATCGCGCCACGGTGACGCACGCCGACCTGCATTACGTCGGCTCGGT
GACCATCGACCCCGATCTCATGGAGGCCGCTGATCTGTTGGAAGGCGAGCAGGTCACCATCGTCGACATCGACAACGGGG
CCCGGCTGGAGACCTACGCGATTACCGGCACGCGGGGCAGTGGCGTGATCGGAATCAATGGGGCCGCAGCGCATCTAGTG
CACCCCGGGGATCTGGTGATCATCATCGCCTACGGTGTGATGACTGATGAAGAGGCCCGCGCGTTCACACCGCGGGTGGT
GTTCGTCGATTCGGATAACAAGCAGGTAGAACTGGGCGAGCATTCCGATGACCCGGCGTACGTGCCCGAGAACTTCGGCC
TGGTGTCACCACGCGGTCTGGTGTAA

Upstream 100 bases:

>100_bases
GGGGAGCACCAGGCTGTTGGACAACGTTCCCATCGAGATCGGACCAACGGGGCCGACAGACCCCGACCACGAGCTTCCCT
GGCGAAATTGACTGGAGGAC

Downstream 100 bases:

>100_bases
CCGTGCTGTTGGCGATCGACGTACGTAATACCCACACGGTGCTGGGGCTGGTTTCCGGTACGGGCGAGCACGCCAAGGTG
GTTCAGCACTGGCGGATTCG

Product: aspartate 1-decarboxylase precursor

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase [H]

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MMFRTMMKSKIHRATVTHADLHYVGSVTIDPDLMEAADLLEGEQVTIVDIDNGARLETYAITGTRGSGVIGINGAAAHLV
HPGDLVIIIAYGVMTDEEARAFTPRVVFVDSDNKQVELGEHSDDPAYVPENFGLVSPRGLV

Sequences:

>Translated_141_residues
MMFRTMMKSKIHRATVTHADLHYVGSVTIDPDLMEAADLLEGEQVTIVDIDNGARLETYAITGTRGSGVIGINGAAAHLV
HPGDLVIIIAYGVMTDEEARAFTPRVVFVDSDNKQVELGEHSDDPAYVPENFGLVSPRGLV
>Mature_141_residues
MMFRTMMKSKIHRATVTHADLHYVGSVTIDPDLMEAADLLEGEQVTIVDIDNGARLETYAITGTRGSGVIGINGAAAHLV
HPGDLVIIIAYGVMTDEEARAFTPRVVFVDSDNKQVELGEHSDDPAYVPENFGLVSPRGLV

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine [H]

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family [H]

Homologues:

Organism=Escherichia coli, GI1786323, Length=113, Percent_Identity=51.3274336283186, Blast_Score=127, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003190
- ProDom:   PD009294 [H]

Pfam domain/function: PF02261 Asp_decarbox [H]

EC number: =4.1.1.11 [H]

Molecular weight: Translated: 15234; Mature: 15234

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFRTMMKSKIHRATVTHADLHYVGSVTIDPDLMEAADLLEGEQVTIVDIDNGARLETYA
CCHHHHHHHHHHHEEEEECCEEEEEEEEECHHHHHHHHHCCCCEEEEEECCCCCEEEEEE
ITGTRGSGVIGINGAAAHLVHPGDLVIIIAYGVMTDEEARAFTPRVVFVDSDNKQVELGE
EECCCCCCEEEECCCEEEEECCCCEEEEEEEEEEECCCCHHCCCEEEEEECCCCEEEECC
HSDDPAYVPENFGLVSPRGLV
CCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMFRTMMKSKIHRATVTHADLHYVGSVTIDPDLMEAADLLEGEQVTIVDIDNGARLETYA
CCHHHHHHHHHHHEEEEECCEEEEEEEEECHHHHHHHHHCCCCEEEEEECCCCCEEEEEE
ITGTRGSGVIGINGAAAHLVHPGDLVIIIAYGVMTDEEARAFTPRVVFVDSDNKQVELGE
EECCCCCCEEEECCCEEEEECCCCEEEEEEEEEEECCCCHHCCCEEEEEECCCCEEEECC
HSDDPAYVPENFGLVSPRGLV
CCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA