| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169627633
Identifier: 169627633
GI number: 169627633
Start: 530372
End: 531190
Strand: Reverse
Name: 169627633
Synonym: MAB_0529c
Alternate gene names: NA
Gene position: 531190-530372 (Counterclockwise)
Preceding gene: 169627635
Following gene: 169627632
Centisome position: 10.48
GC content: 62.76
Gene sequence:
>819_bases ATGCCCAACGACCTGGCCAAATACTCTAATCCCGATGGGGTGGTGCCCGACCGCACGACCTGGACCCCCTGGCTCAAAGC CTGGCGAATGCTCATCGACGCCAAGTACCACGGGGACATCTACGAGGCATTTCTCGGTATGGAGGCGCCCGTCTTCGCGC GCGCCTACTACCAGGTGCGCTCTCACCCGAACGGCCGCAAGCTGTTCAAGCACAAACCAGACCTACTCTCGGTGCTCGGT GACGTGGACTACCTGAGCTCGCTGCCATTCGGCAGCTTGGGGCACGCGTACCTCTCGTTTCTGAATACCAACAAACTCGA CGCTGGCGTGTTCGGCGAATCCAGCATCATCAGACCAATCGCCGAGAAGAACAACTGGGATGACGACTTCTACTACATGG TCATCCGGGGCACCGCACTGCACGACATGTTTCACACCATCGGCGGCTATGGCCCCGACGTCGCCGGCGAAGTGGCCAAT ATCGGATTCCATTGCGGACAAATGGAACCTGCCGGGCCGCTGGGGAAGCTCGGACTGTTCGGAGCCCTCACCCTGCCCGG CGCCTCCATACCGTTCAAGCTGCGCTACTACCGGCAGGCCGTCGAACGTGGACGTCGCGCCGACCTGCTGATGGCGGCGC CCTGGGAGGAGCTGCTTGAGCTTCCATACCGAGAGGCACAATCGATGCTGGGCGTCAGCCCGGTCGAGGTGGCTCATCCA GAGGGTCGGTGGACCACCGAATGGACACCCCCATCCATCAAACCCCCCGCCCCGTGGGACTACGAACGCATTCTCGCCGC CGGACCCGCGGCGGCCTGA
Upstream 100 bases:
>100_bases CGGGGAGCCTTGTCCTCGCCCTGCGCCTTGCGGGCCATCCTCTCGCCGCCTCCTCAAACAATATATTGACACTTTAGTTG ATCTGTCTATTATTAGCCGT
Downstream 100 bases:
>100_bases ACAACCACCGCTTCAACACAATTCGACCACGCCGAAGACAAGCATGACCGGTCTCCACCGAGACGGTTGACAAGATCGCC GGAGTGTCTAATATTCCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MPNDLAKYSNPDGVVPDRTTWTPWLKAWRMLIDAKYHGDIYEAFLGMEAPVFARAYYQVRSHPNGRKLFKHKPDLLSVLG DVDYLSSLPFGSLGHAYLSFLNTNKLDAGVFGESSIIRPIAEKNNWDDDFYYMVIRGTALHDMFHTIGGYGPDVAGEVAN IGFHCGQMEPAGPLGKLGLFGALTLPGASIPFKLRYYRQAVERGRRADLLMAAPWEELLELPYREAQSMLGVSPVEVAHP EGRWTTEWTPPSIKPPAPWDYERILAAGPAAA
Sequences:
>Translated_272_residues MPNDLAKYSNPDGVVPDRTTWTPWLKAWRMLIDAKYHGDIYEAFLGMEAPVFARAYYQVRSHPNGRKLFKHKPDLLSVLG DVDYLSSLPFGSLGHAYLSFLNTNKLDAGVFGESSIIRPIAEKNNWDDDFYYMVIRGTALHDMFHTIGGYGPDVAGEVAN IGFHCGQMEPAGPLGKLGLFGALTLPGASIPFKLRYYRQAVERGRRADLLMAAPWEELLELPYREAQSMLGVSPVEVAHP EGRWTTEWTPPSIKPPAPWDYERILAAGPAAA >Mature_271_residues PNDLAKYSNPDGVVPDRTTWTPWLKAWRMLIDAKYHGDIYEAFLGMEAPVFARAYYQVRSHPNGRKLFKHKPDLLSVLGD VDYLSSLPFGSLGHAYLSFLNTNKLDAGVFGESSIIRPIAEKNNWDDDFYYMVIRGTALHDMFHTIGGYGPDVAGEVANI GFHCGQMEPAGPLGKLGLFGALTLPGASIPFKLRYYRQAVERGRRADLLMAAPWEELLELPYREAQSMLGVSPVEVAHPE GRWTTEWTPPSIKPPAPWDYERILAAGPAAA
Specific function: Unknown
COG id: COG5031
COG function: function code H; Uncharacterized protein involved in ubiquinone biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI166795285, Length=178, Percent_Identity=28.0898876404494, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30309; Mature: 30178
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNDLAKYSNPDGVVPDRTTWTPWLKAWRMLIDAKYHGDIYEAFLGMEAPVFARAYYQVR CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHH SHPNGRKLFKHKPDLLSVLGDVDYLSSLPFGSLGHAYLSFLNTNKLDAGVFGESSIIRPI CCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHH AEKNNWDDDFYYMVIRGTALHDMFHTIGGYGPDVAGEVANIGFHCGQMEPAGPLGKLGLF HHCCCCCCCEEEEEEECHHHHHHHHHHCCCCCCHHHHHHHCCEECCCCCCCCCCCHHHHH GALTLPGASIPFKLRYYRQAVERGRRADLLMAAPWEELLELPYREAQSMLGVSPVEVAHP HHEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHCCHHHHHHHHCCCCCEEECC EGRWTTEWTPPSIKPPAPWDYERILAAGPAAA CCCEECCCCCCCCCCCCCCCHHHHHHCCCCCC >Mature Secondary Structure PNDLAKYSNPDGVVPDRTTWTPWLKAWRMLIDAKYHGDIYEAFLGMEAPVFARAYYQVR CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHH SHPNGRKLFKHKPDLLSVLGDVDYLSSLPFGSLGHAYLSFLNTNKLDAGVFGESSIIRPI CCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHH AEKNNWDDDFYYMVIRGTALHDMFHTIGGYGPDVAGEVANIGFHCGQMEPAGPLGKLGLF HHCCCCCCCEEEEEEECHHHHHHHHHHCCCCCCHHHHHHHCCEECCCCCCCCCCCHHHHH GALTLPGASIPFKLRYYRQAVERGRRADLLMAAPWEELLELPYREAQSMLGVSPVEVAHP HHEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHCCHHHHHHHHCCCCCEEECC EGRWTTEWTPPSIKPPAPWDYERILAAGPAAA CCCEECCCCCCCCCCCCCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA