| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169627619
Identifier: 169627619
GI number: 169627619
Start: 517383
End: 517802
Strand: Direct
Name: 169627619
Synonym: MAB_0515
Alternate gene names: NA
Gene position: 517383-517802 (Clockwise)
Preceding gene: 169627618
Following gene: 169627621
Centisome position: 10.21
GC content: 65.0
Gene sequence:
>420_bases GTGTCGACACAACATCAAACGTTTCGGGTCTTCACTGACGATGCCGCCGGATGGCTGGAACTGACCGGCGGAACGGGTGT CACCGCGCGTGTCAACGCCCCGGACCTCAAGCAGGCACAACGGGCCCGGCATTCCCTGCGAACCTCGCGTAAGGACGCCC CTGCCGTCATTTTGGACGTGTACGTGCATGTTGAGGCCGATTCACGGTCGGCGCGCAAGCATTTCGCGAGCCTGAGGGTA CCGGCCGCGGTGTCGTATGCGGGCACACCGGAAGGGTTGGCGGGTCTGATCGCGGACATCTATCTGGCTGGGGTGGCCGA TGGGGTCACGCTGATCCCGGTGTCGCCCACCACAGACATCGGATGTGCCGCTCGCCGGGTGCTGGCACTGTTACCGCAGC GCATCCCGCTGGCTGCCTAG
Upstream 100 bases:
>100_bases GCTGACCGAGACCGAGCAGTCGCCCGTCTGATCGAGACTGATCCGCTCACCGGGAATTCAACGATGGCCCCGGCCGGCCC GCGTGGGTACCGTTGCGTCT
Downstream 100 bases:
>100_bases GGGCGCGTTGTCGGGGGTCCCGATCACCACTCGATCACCAGTTGTCGTAACCGCCCTCGGGGCCGAGCATGCGTTCCAGC CGCGTGCGGTTGATCTTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MSTQHQTFRVFTDDAAGWLELTGGTGVTARVNAPDLKQAQRARHSLRTSRKDAPAVILDVYVHVEADSRSARKHFASLRV PAAVSYAGTPEGLAGLIADIYLAGVADGVTLIPVSPTTDIGCAARRVLALLPQRIPLAA
Sequences:
>Translated_139_residues MSTQHQTFRVFTDDAAGWLELTGGTGVTARVNAPDLKQAQRARHSLRTSRKDAPAVILDVYVHVEADSRSARKHFASLRV PAAVSYAGTPEGLAGLIADIYLAGVADGVTLIPVSPTTDIGCAARRVLALLPQRIPLAA >Mature_138_residues STQHQTFRVFTDDAAGWLELTGGTGVTARVNAPDLKQAQRARHSLRTSRKDAPAVILDVYVHVEADSRSARKHFASLRVP AAVSYAGTPEGLAGLIADIYLAGVADGVTLIPVSPTTDIGCAARRVLALLPQRIPLAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14698; Mature: 14567
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTQHQTFRVFTDDAAGWLELTGGTGVTARVNAPDLKQAQRARHSLRTSRKDAPAVILDV CCCCCCEEEEEECCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEE YVHVEADSRSARKHFASLRVPAAVSYAGTPEGLAGLIADIYLAGVADGVTLIPVSPTTDI EEEEECCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCH GCAARRVLALLPQRIPLAA HHHHHHHHHHCCCCCCCCC >Mature Secondary Structure STQHQTFRVFTDDAAGWLELTGGTGVTARVNAPDLKQAQRARHSLRTSRKDAPAVILDV CCCCCEEEEEECCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEE YVHVEADSRSARKHFASLRVPAAVSYAGTPEGLAGLIADIYLAGVADGVTLIPVSPTTDI EEEEECCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCH GCAARRVLALLPQRIPLAA HHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA