| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627621
Identifier: 169627621
GI number: 169627621
Start: 518473
End: 519153
Strand: Direct
Name: 169627621
Synonym: MAB_0517
Alternate gene names: NA
Gene position: 518473-519153 (Clockwise)
Preceding gene: 169627619
Following gene: 169627623
Centisome position: 10.23
GC content: 66.67
Gene sequence:
>681_bases GTGACGGATCCGGCCTGGCAGCAGTACCCGCAGGAACAGTGGCCCGTCGACGAGCCCATCCCTTATCCCGAGGATCCGAA GCCTCCGAAATGGCCGTGGATAGTCGCCGGTATCAGCGTTCTGGCGGTGCTGGCGATAGCGTTGACGTCGATCCTCGTCA TCACCCGCCGCACCGAGGTGGCGGCGCCGACCACAGTGACCGTTACCCCGTCCACAACATGGACCGGGCCCAATGACGTC CCGCTACCGTCCATAACGACGACAGAGCCGCCGCCGCCCTCGCCACCTCCGCCGAATCCCAGCACCGGGGTGGAGACGCC GACAACCACCGAGGCGCCTCCGGTACCCACCACGACGGAAGCGCCCCAGCCGGTGCCGACGACAGGCCAGGGGCCGGGCG GTTCGGGACACGGCAGCAAGAGTGTCACCTACAGCGTCGGCGGCTCCGGCAGCCAGGTCAACGTCGCCTACATGACGGAC ACGGAGTACGTGCGGGTCGCGAACATCTCACAGCCCTGGGCGGTGACGGTGACGCGGACTCAGCGGGACAAGCCGCTCAT CATGAATGTCACCATGGTGGGCGAGGGGACGATCAGCTGTTCGATCACCGTCGACGGAGTGACCGTGACGGAAAGCACCG ATGTGTTCGCCGTCGTGTGTCAGGCGCCGATGCCGGGTTAG
Upstream 100 bases:
>100_bases ACGGGTGACCTCTGTTCGCTAGAGGGTGACCGCCAATTTTGCAGGAGCTTAACGCGACGTAACATTGCGGCGAGCAATGC TGGGGAAGGAGCGGGGGACA
Downstream 100 bases:
>100_bases TGCCCCTGTGTCTTGAGACGCTCGAATGACGCGAGTACCTCGGCCTCGGCCTCGGCGCGGCCCACCCAGTCGGCGGCCTC GACGAATTTGCCGGGTTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MTDPAWQQYPQEQWPVDEPIPYPEDPKPPKWPWIVAGISVLAVLAIALTSILVITRRTEVAAPTTVTVTPSTTWTGPNDV PLPSITTTEPPPPSPPPPNPSTGVETPTTTEAPPVPTTTEAPQPVPTTGQGPGGSGHGSKSVTYSVGGSGSQVNVAYMTD TEYVRVANISQPWAVTVTRTQRDKPLIMNVTMVGEGTISCSITVDGVTVTESTDVFAVVCQAPMPG
Sequences:
>Translated_226_residues MTDPAWQQYPQEQWPVDEPIPYPEDPKPPKWPWIVAGISVLAVLAIALTSILVITRRTEVAAPTTVTVTPSTTWTGPNDV PLPSITTTEPPPPSPPPPNPSTGVETPTTTEAPPVPTTTEAPQPVPTTGQGPGGSGHGSKSVTYSVGGSGSQVNVAYMTD TEYVRVANISQPWAVTVTRTQRDKPLIMNVTMVGEGTISCSITVDGVTVTESTDVFAVVCQAPMPG >Mature_225_residues TDPAWQQYPQEQWPVDEPIPYPEDPKPPKWPWIVAGISVLAVLAIALTSILVITRRTEVAAPTTVTVTPSTTWTGPNDVP LPSITTTEPPPPSPPPPNPSTGVETPTTTEAPPVPTTTEAPQPVPTTGQGPGGSGHGSKSVTYSVGGSGSQVNVAYMTDT EYVRVANISQPWAVTVTRTQRDKPLIMNVTMVGEGTISCSITVDGVTVTESTDVFAVVCQAPMPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23721; Mature: 23590
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPAWQQYPQEQWPVDEPIPYPEDPKPPKWPWIVAGISVLAVLAIALTSILVITRRTEV CCCCHHHHCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCC AAPTTVTVTPSTTWTGPNDVPLPSITTTEPPPPSPPPPNPSTGVETPTTTEAPPVPTTTE CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APQPVPTTGQGPGGSGHGSKSVTYSVGGSGSQVNVAYMTDTEYVRVANISQPWAVTVTRT CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCCEEEEEEEC QRDKPLIMNVTMVGEGTISCSITVDGVTVTESTDVFAVVCQAPMPG CCCCCEEEEEEEECCCEEEEEEEECCEEEECCCCEEEEEECCCCCC >Mature Secondary Structure TDPAWQQYPQEQWPVDEPIPYPEDPKPPKWPWIVAGISVLAVLAIALTSILVITRRTEV CCCHHHHCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCC AAPTTVTVTPSTTWTGPNDVPLPSITTTEPPPPSPPPPNPSTGVETPTTTEAPPVPTTTE CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APQPVPTTGQGPGGSGHGSKSVTYSVGGSGSQVNVAYMTDTEYVRVANISQPWAVTVTRT CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCCEEEEEEEC QRDKPLIMNVTMVGEGTISCSITVDGVTVTESTDVFAVVCQAPMPG CCCCCEEEEEEEECCCEEEEEEEECCEEEECCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA