| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627598
Identifier: 169627598
GI number: 169627598
Start: 492892
End: 494049
Strand: Direct
Name: 169627598
Synonym: MAB_0494
Alternate gene names: NA
Gene position: 492892-494049 (Clockwise)
Preceding gene: 169627597
Following gene: 169627601
Centisome position: 9.73
GC content: 64.08
Gene sequence:
>1158_bases GTGAGTGCCGCCGCAGAGGCATGGGGGAACCTGCAAGCCATCCGGGTGGCGGTGCTGGTTGGCTTCATGCCGGTATTGCT CTACCGGATCTGGCGAGTCGCGCGATTCCCGGCGTCTGTGCCGGCCCTTGCCGCAACGGCTTTCGGAGCATCGGCCTGGT TCTGGCTCCTGATTTACTCCGACTGGGTGTGGCCCTCGTTGCCGCCCGTGGTGCACGCTGTCAGCGTGGCGGGCTGGCCG CCCATCACGATCGCTGCCTGTTTGCAGGTCTTTGTGGTGGGCATCGCCGGGGATGCGTCGCCGGCGCGGATCCGACGTGC GTTACGTACGGCTTCCGTGATGGCTGTTCTCGCGCTGATAGCGGTCACGGTGCTGGTAACCCGCAGTCGGCTGCCCATGA GCTCAGATGACGTGTACGTGCTTGCCGAGGCGGTCTTCACCGAGGGCGATCCGGCAGCGGTCACGGCGGTGGTGATCAGC AGCGCGTACGTGATATTCGTGGCGGTCCAGTTGGCGTGGCATGGTTTTCGACACATCGACCGCACCCCGGTCGGGGTCGG TCTAGGGCTGATGGCGGTGGCGTCCATCTTTCAGATTGTTGCGTGCGTCTTCGGGGGTATCTGGCAGCCGCTGTCGCGCG GCCAAGGGGTTATGGGTAGTGCGTATGGAGTGTGGCTCGATACCTGGCCGGGCTGCATCGCGGAGATCTTGATGTTCACG GGATTCCTGTGGCCTCCCGTGGTATCGCGCGTGCAGGCGCATCGGGACGTACGGCGGCTTCGTCCGCTGCACAACGCCCT CGCGGATCTCTTTCCGGCGCTTTTTCCGCCAATGGAATCGCGCATAAGGTTGTCCGACAAGGTGTTTGAATGGGGCTTCC ATATTCAGGATGGTCTTACCTTGCTGGCACAACGGCGCGGTGACCCGCTTGTGGCCGGGCGCCCGGCTGCCGAAGAGTCA TCAGCGCGGGCGGGGGTAGTGGCAAAATGGCTTGTCGGCCAACCAGTTCCGGGGTTCAGCCGTGAATGGCTGCACGCCCC TGATGGCGTCAGTGACGAATCCTGGATGCTCGCGATAGCCGACGCCTATCGGGAGCGTCAGGAAGACGCGGAGTTCCCGG CTTCCTTGTCGGGTATGCCCTCCACCTTGCGGAGGTGA
Upstream 100 bases:
>100_bases CCACGAGCGACGAGAGGTGGGTGCATGAGTTAGCCAAGGCGTATCGGGTGCGTCAGGAAATGTCGGGGCATCACTTCAGT GGGCAGGTGGTGGCGAACGG
Downstream 100 bases:
>100_bases TCGACCATGTCGGCAATCGCCTGCCGGCTGTGCTCGGATAATGCGTAGCTGCGCTGCGCTATCTCTCGTACCTTCGAGTC GCGCAGCTGCACAAGCCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 385; Mature: 384
Protein sequence:
>385_residues MSAAAEAWGNLQAIRVAVLVGFMPVLLYRIWRVARFPASVPALAATAFGASAWFWLLIYSDWVWPSLPPVVHAVSVAGWP PITIAACLQVFVVGIAGDASPARIRRALRTASVMAVLALIAVTVLVTRSRLPMSSDDVYVLAEAVFTEGDPAAVTAVVIS SAYVIFVAVQLAWHGFRHIDRTPVGVGLGLMAVASIFQIVACVFGGIWQPLSRGQGVMGSAYGVWLDTWPGCIAEILMFT GFLWPPVVSRVQAHRDVRRLRPLHNALADLFPALFPPMESRIRLSDKVFEWGFHIQDGLTLLAQRRGDPLVAGRPAAEES SARAGVVAKWLVGQPVPGFSREWLHAPDGVSDESWMLAIADAYRERQEDAEFPASLSGMPSTLRR
Sequences:
>Translated_385_residues MSAAAEAWGNLQAIRVAVLVGFMPVLLYRIWRVARFPASVPALAATAFGASAWFWLLIYSDWVWPSLPPVVHAVSVAGWP PITIAACLQVFVVGIAGDASPARIRRALRTASVMAVLALIAVTVLVTRSRLPMSSDDVYVLAEAVFTEGDPAAVTAVVIS SAYVIFVAVQLAWHGFRHIDRTPVGVGLGLMAVASIFQIVACVFGGIWQPLSRGQGVMGSAYGVWLDTWPGCIAEILMFT GFLWPPVVSRVQAHRDVRRLRPLHNALADLFPALFPPMESRIRLSDKVFEWGFHIQDGLTLLAQRRGDPLVAGRPAAEES SARAGVVAKWLVGQPVPGFSREWLHAPDGVSDESWMLAIADAYRERQEDAEFPASLSGMPSTLRR >Mature_384_residues SAAAEAWGNLQAIRVAVLVGFMPVLLYRIWRVARFPASVPALAATAFGASAWFWLLIYSDWVWPSLPPVVHAVSVAGWPP ITIAACLQVFVVGIAGDASPARIRRALRTASVMAVLALIAVTVLVTRSRLPMSSDDVYVLAEAVFTEGDPAAVTAVVISS AYVIFVAVQLAWHGFRHIDRTPVGVGLGLMAVASIFQIVACVFGGIWQPLSRGQGVMGSAYGVWLDTWPGCIAEILMFTG FLWPPVVSRVQAHRDVRRLRPLHNALADLFPALFPPMESRIRLSDKVFEWGFHIQDGLTLLAQRRGDPLVAGRPAAEESS ARAGVVAKWLVGQPVPGFSREWLHAPDGVSDESWMLAIADAYRERQEDAEFPASLSGMPSTLRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41812; Mature: 41681
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAAEAWGNLQAIRVAVLVGFMPVLLYRIWRVARFPASVPALAATAFGASAWFWLLIYS CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH DWVWPSLPPVVHAVSVAGWPPITIAACLQVFVVGIAGDASPARIRRALRTASVMAVLALI CCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH AVTVLVTRSRLPMSSDDVYVLAEAVFTEGDPAAVTAVVISSAYVIFVAVQLAWHGFRHID HHHHHHHHCCCCCCCCCCEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RTPVGVGLGLMAVASIFQIVACVFGGIWQPLSRGQGVMGSAYGVWLDTWPGCIAEILMFT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEHHHHCHHHHHHHHHHHH GFLWPPVVSRVQAHRDVRRLRPLHNALADLFPALFPPMESRIRLSDKVFEWGFHIQDGLT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHH LLAQRRGDPLVAGRPAAEESSARAGVVAKWLVGQPVPGFSREWLHAPDGVSDESWMLAIA HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCHHHHHHH DAYRERQEDAEFPASLSGMPSTLRR HHHHHHHHHHCCCCCCCCCCHHHCC >Mature Secondary Structure SAAAEAWGNLQAIRVAVLVGFMPVLLYRIWRVARFPASVPALAATAFGASAWFWLLIYS CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH DWVWPSLPPVVHAVSVAGWPPITIAACLQVFVVGIAGDASPARIRRALRTASVMAVLALI CCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH AVTVLVTRSRLPMSSDDVYVLAEAVFTEGDPAAVTAVVISSAYVIFVAVQLAWHGFRHID HHHHHHHHCCCCCCCCCCEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RTPVGVGLGLMAVASIFQIVACVFGGIWQPLSRGQGVMGSAYGVWLDTWPGCIAEILMFT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEHHHHCHHHHHHHHHHHH GFLWPPVVSRVQAHRDVRRLRPLHNALADLFPALFPPMESRIRLSDKVFEWGFHIQDGLT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHH LLAQRRGDPLVAGRPAAEESSARAGVVAKWLVGQPVPGFSREWLHAPDGVSDESWMLAIA HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCHHHHHHH DAYRERQEDAEFPASLSGMPSTLRR HHHHHHHHHHCCCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA