| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627601
Identifier: 169627601
GI number: 169627601
Start: 495529
End: 496275
Strand: Direct
Name: 169627601
Synonym: MAB_0497
Alternate gene names: NA
Gene position: 495529-496275 (Clockwise)
Preceding gene: 169627598
Following gene: 169627603
Centisome position: 9.78
GC content: 64.66
Gene sequence:
>747_bases GTGCCTACTCAGACCCCGGCGGCCGTTGCGCCCCTGCATGGATTGCGAGATGTGCGCACTTATATCGATATCGCTGTCGT GGTCGCGGTACTTGTTGCCACCAACCTGATCGCCCACTTCACAACGCCGTGGGCCAATTTCGTGGTGGTCCCGATTGCCG CGATCGGCCTGCTCGCTCTCATCCGCTACCGCGGTCACTCCTGGGCCGAGCTGGGCTTGGGTCGCGACCATTGGCGGTCC GGTGCCAAGTACGCGGCTGTCGCCGTGGTCATTGTCGGTGCGGTAATCGGTATCGGCTTGTTGCTGCCGATCACCCGCCC CATGTTCCTGAACAGCAGCTACGCCACCACGGTTTCGGGTGCGCTGCTCGCCTCCTTCGTGCTGATCCCACTGCAGACGG TGATCCCCGAAGAGCTTGCGTTCCGCGGTGTGCTGCACGGAACCATGGCGCGTGCCTGGGGTTTTCGGGGCGTGGCGGCA GTCGGCTCCTTGCTGTTCGGTTTCTGGCATATCGCCACCTCGCTGGGGCTGACGACCGGCAATGTCGGCCTTACCCGACT GCTCGGCGTGGGATTGTGGGCGCAGATCGCGGGTGTGGCCGGGGCGGTGGTCGCCACCGCGATCGCCGGATTTGTCTTTA CCTGGTTGCGCAGGCGTAGCGGCAGCCTCTTGGCGCCCATCGCGCTGCATTGGTCGCTGAATGGCATGGGTGTGCTGGCC GCCGTCCTGGTCTGGCACTTGATCTAG
Upstream 100 bases:
>100_bases TTGGCTGCTCGCTCGGGCCCAAAACTGCGTCGTGATCGGTATGGATACGACTGGATCACACTCTGAGCTGGGCCAACAAG ACCGCCGGTACTCTGGACCG
Downstream 100 bases:
>100_bases CCGCATGCGGCGGTTGCCGCCGCCGCGAGGAAGAGCAATTGCTCAAGGGTCCTCCATCCCAGCGGAGTCGACAGCGGATT GGACCGCTGGCTCGCGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: Protease; Conserved Integral Membrane Protein; Conserved Membrane Protein; Peptidase; Integral Membrane Protein
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MPTQTPAAVAPLHGLRDVRTYIDIAVVVAVLVATNLIAHFTTPWANFVVVPIAAIGLLALIRYRGHSWAELGLGRDHWRS GAKYAAVAVVIVGAVIGIGLLLPITRPMFLNSSYATTVSGALLASFVLIPLQTVIPEELAFRGVLHGTMARAWGFRGVAA VGSLLFGFWHIATSLGLTTGNVGLTRLLGVGLWAQIAGVAGAVVATAIAGFVFTWLRRRSGSLLAPIALHWSLNGMGVLA AVLVWHLI
Sequences:
>Translated_248_residues MPTQTPAAVAPLHGLRDVRTYIDIAVVVAVLVATNLIAHFTTPWANFVVVPIAAIGLLALIRYRGHSWAELGLGRDHWRS GAKYAAVAVVIVGAVIGIGLLLPITRPMFLNSSYATTVSGALLASFVLIPLQTVIPEELAFRGVLHGTMARAWGFRGVAA VGSLLFGFWHIATSLGLTTGNVGLTRLLGVGLWAQIAGVAGAVVATAIAGFVFTWLRRRSGSLLAPIALHWSLNGMGVLA AVLVWHLI >Mature_247_residues PTQTPAAVAPLHGLRDVRTYIDIAVVVAVLVATNLIAHFTTPWANFVVVPIAAIGLLALIRYRGHSWAELGLGRDHWRSG AKYAAVAVVIVGAVIGIGLLLPITRPMFLNSSYATTVSGALLASFVLIPLQTVIPEELAFRGVLHGTMARAWGFRGVAAV GSLLFGFWHIATSLGLTTGNVGLTRLLGVGLWAQIAGVAGAVVATAIAGFVFTWLRRRSGSLLAPIALHWSLNGMGVLAA VLVWHLI
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26119; Mature: 25988
Theoretical pI: Translated: 11.96; Mature: 11.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTQTPAAVAPLHGLRDVRTYIDIAVVVAVLVATNLIAHFTTPWANFVVVPIAAIGLLAL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH IRYRGHSWAELGLGRDHWRSGAKYAAVAVVIVGAVIGIGLLLPITRPMFLNSSYATTVSG HHHCCCCHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHH ALLASFVLIPLQTVIPEELAFRGVLHGTMARAWGFRGVAAVGSLLFGFWHIATSLGLTTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC NVGLTRLLGVGLWAQIAGVAGAVVATAIAGFVFTWLRRRSGSLLAPIALHWSLNGMGVLA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHEEECCCCHHHHH AVLVWHLI HHHHHHCC >Mature Secondary Structure PTQTPAAVAPLHGLRDVRTYIDIAVVVAVLVATNLIAHFTTPWANFVVVPIAAIGLLAL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH IRYRGHSWAELGLGRDHWRSGAKYAAVAVVIVGAVIGIGLLLPITRPMFLNSSYATTVSG HHHCCCCHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHH ALLASFVLIPLQTVIPEELAFRGVLHGTMARAWGFRGVAAVGSLLFGFWHIATSLGLTTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC NVGLTRLLGVGLWAQIAGVAGAVVATAIAGFVFTWLRRRSGSLLAPIALHWSLNGMGVLA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHEEECCCCHHHHH AVLVWHLI HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA