| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627594
Identifier: 169627594
GI number: 169627594
Start: 487968
End: 489527
Strand: Reverse
Name: 169627594
Synonym: MAB_0490c
Alternate gene names: NA
Gene position: 489527-487968 (Counterclockwise)
Preceding gene: 169627599
Following gene: 169627590
Centisome position: 9.66
GC content: 66.47
Gene sequence:
>1560_bases GTGACTGGCGCGGAGGGTAGGCCCGATCGGCGCCCGCTCGCACGCGCAGCCCGGTATTCGCGGTGGGTCATGCGGACGCC ATGGCCCCTCTTCATCATGGGTATTGCCCAGTCGAACCTGGTCGGAGCCCTGTTCGTACTGGGGTTCCTGCGGTTCGGTC TGCCACCGAGTGATCGTGTCGAACTCACCGAACTTGGCCCGACGCGGCTCATCATCCTGGGCTTCTCGTTGTTCATCCTG TTCGTCGTGGGGGCCATCGTCAGCACCTATCTGCTCCTGCCGGTGCTGCGCTGGCAGTATCGGTCCCCCGACTTCGAGTC CGAAGGCTCCGAAGCGGTCCGGGTACGAGCCTTGCAGATGCCGTTCTATCGGACCGTCATCAGTGTCGCGACGTGGCTCG TCGGAGGGGCCATCTTCGTCGCGGTCACCTGGTCATCCACCCACAGCTCGGTGCTGGTCGCGGCATTCGCGACCGTGCTC GGCGCGACCACGACCAGCATCATCGGCTATCTGCAGTCCGAGCGCGTGCTGCGCCCGGTCGCCATTCAGGCCCTGCGTCG CGGTGTTCCCGAAAACGTCACCGCCCCAGGCGTTATCGTCCGCCAGATTCTCACCTGGGCACTGAGCACCGGCGTGCCGA TCCTGGCGATCGTGCTGACCGTGGTGGGGCAGCGGGCGGGGTACCTGAAATCCAATGCCGACAACCTCACCGGGTCGATA CTGATCCTGGCCATCATCGCGCTGGCCATCGGACTCATGGGCACCCTGCTGGTGGCGACCTCGATCGCCGATCCGCTGCG CCAGTTGCGTTGGGCTCTCAGCGAAGTGCAGCGCGGCAACTACAACGCCCACGTGCCCATCTACGACGCCAGCGAGCTCG GACTGCTGCAAGCCGGGTTCAACGACATGGTGCGCGATCTCGGTGAACGGCAACGCCTACGCGACCTGTTCGGCCGCTAC GTCGGCGAGGACGTGGCGCGCCGGGCGCTCGAATACGGCACCGAACTGGGAGGCCAGGAGCGCAGCGTCGCGGTGCTCTT CGTCGACCTGGTGGGGTCCACCCAGTTGGCGTCCACTCGGGGGCCTGCGGTGGTCGTACGGGTGCTCAACGAGTTCTTCC GGGTCATCGTCGACACCGTCAACAAGCACGGCGGCTTCGTGAACAAGTTCCAGGGTGACGCGGCGCTGGCGATTTTTGGT GCCCCGATCGACCACCCGGACGGCGCCGCAGCGGCACTTGCGGCCGCTCGTGAGCTGTCGGGCGAGCTGACCAATGTGTT GGGCTCCAATGACTTCGGCATAGGAGTCTCCGCCGGACGGGCGATCGCCGGGCATATCGGCGCACAGGCCCGATTCGAGT ACACCGTGATCGGCGACCCGGTGAACGAAGCGGCCCGACTCACCGAGCTGGCTAAGAACGAGCCGGGCAACGTGCTCGCG TCGGCCTCCGCAGTCATGGAGGCGCGCGACGAGGAGGCACTGCGCTGGGATGTCGGCGAGACCGTCGAACTGCGCGGCCG CACGGTCTCAACGCAGGTTGCGCGCCCGCGTCACGGCTAA
Upstream 100 bases:
>100_bases CGCTCATCGCCTACCAACCCTAGTCGCCGGCACCGACTCCAACCGCCTCCACACAGGCGTGTGAAACGCCTCCGTCACCG CCGACAGCTACGGTTAACGG
Downstream 100 bases:
>100_bases GTCGCCTTCTTCGCGGCCTTTTTCGCGGGCGCCTTTTTGGCCGGGGCCTTCTTGGCAGCCTTCGCCGGTGCCTTCTTGGC CCGCTTCACCGGCCCGCGTG
Product: putative adenylate cyclase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 519; Mature: 518
Protein sequence:
>519_residues MTGAEGRPDRRPLARAARYSRWVMRTPWPLFIMGIAQSNLVGALFVLGFLRFGLPPSDRVELTELGPTRLIILGFSLFIL FVVGAIVSTYLLLPVLRWQYRSPDFESEGSEAVRVRALQMPFYRTVISVATWLVGGAIFVAVTWSSTHSSVLVAAFATVL GATTTSIIGYLQSERVLRPVAIQALRRGVPENVTAPGVIVRQILTWALSTGVPILAIVLTVVGQRAGYLKSNADNLTGSI LILAIIALAIGLMGTLLVATSIADPLRQLRWALSEVQRGNYNAHVPIYDASELGLLQAGFNDMVRDLGERQRLRDLFGRY VGEDVARRALEYGTELGGQERSVAVLFVDLVGSTQLASTRGPAVVVRVLNEFFRVIVDTVNKHGGFVNKFQGDAALAIFG APIDHPDGAAAALAAARELSGELTNVLGSNDFGIGVSAGRAIAGHIGAQARFEYTVIGDPVNEAARLTELAKNEPGNVLA SASAVMEARDEEALRWDVGETVELRGRTVSTQVARPRHG
Sequences:
>Translated_519_residues MTGAEGRPDRRPLARAARYSRWVMRTPWPLFIMGIAQSNLVGALFVLGFLRFGLPPSDRVELTELGPTRLIILGFSLFIL FVVGAIVSTYLLLPVLRWQYRSPDFESEGSEAVRVRALQMPFYRTVISVATWLVGGAIFVAVTWSSTHSSVLVAAFATVL GATTTSIIGYLQSERVLRPVAIQALRRGVPENVTAPGVIVRQILTWALSTGVPILAIVLTVVGQRAGYLKSNADNLTGSI LILAIIALAIGLMGTLLVATSIADPLRQLRWALSEVQRGNYNAHVPIYDASELGLLQAGFNDMVRDLGERQRLRDLFGRY VGEDVARRALEYGTELGGQERSVAVLFVDLVGSTQLASTRGPAVVVRVLNEFFRVIVDTVNKHGGFVNKFQGDAALAIFG APIDHPDGAAAALAAARELSGELTNVLGSNDFGIGVSAGRAIAGHIGAQARFEYTVIGDPVNEAARLTELAKNEPGNVLA SASAVMEARDEEALRWDVGETVELRGRTVSTQVARPRHG >Mature_518_residues TGAEGRPDRRPLARAARYSRWVMRTPWPLFIMGIAQSNLVGALFVLGFLRFGLPPSDRVELTELGPTRLIILGFSLFILF VVGAIVSTYLLLPVLRWQYRSPDFESEGSEAVRVRALQMPFYRTVISVATWLVGGAIFVAVTWSSTHSSVLVAAFATVLG ATTTSIIGYLQSERVLRPVAIQALRRGVPENVTAPGVIVRQILTWALSTGVPILAIVLTVVGQRAGYLKSNADNLTGSIL ILAIIALAIGLMGTLLVATSIADPLRQLRWALSEVQRGNYNAHVPIYDASELGLLQAGFNDMVRDLGERQRLRDLFGRYV GEDVARRALEYGTELGGQERSVAVLFVDLVGSTQLASTRGPAVVVRVLNEFFRVIVDTVNKHGGFVNKFQGDAALAIFGA PIDHPDGAAAALAAARELSGELTNVLGSNDFGIGVSAGRAIAGHIGAQARFEYTVIGDPVNEAARLTELAKNEPGNVLAS ASAVMEARDEEALRWDVGETVELRGRTVSTQVARPRHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HAMP domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR003660 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00672 HAMP [H]
EC number: NA
Molecular weight: Translated: 55888; Mature: 55757
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: PS50885 HAMP ; PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGAEGRPDRRPLARAARYSRWVMRTPWPLFIMGIAQSNLVGALFVLGFLRFGLPPSDRV CCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCE ELTELGPTRLIILGFSLFILFVVGAIVSTYLLLPVLRWQYRSPDFESEGSEAVRVRALQM EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHC PFYRTVISVATWLVGGAIFVAVTWSSTHSSVLVAAFATVLGATTTSIIGYLQSERVLRPV HHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIQALRRGVPENVTAPGVIVRQILTWALSTGVPILAIVLTVVGQRAGYLKSNADNLTGSI HHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH LILAIIALAIGLMGTLLVATSIADPLRQLRWALSEVQRGNYNAHVPIYDASELGLLQAGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHCCHHHHCH NDMVRDLGERQRLRDLFGRYVGEDVARRALEYGTELGGQERSVAVLFVDLVGSTQLASTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHCCCHHCCCC GPAVVVRVLNEFFRVIVDTVNKHGGFVNKFQGDAALAIFGAPIDHPDGAAAALAAARELS CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHH GELTNVLGSNDFGIGVSAGRAIAGHIGAQARFEYTVIGDPVNEAARLTELAKNEPGNVLA HHHHHHHCCCCCCCCCCCCCHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCHHH SASAVMEARDEEALRWDVGETVELRGRTVSTQVARPRHG HHHHHHHHCCCHHHCCCCCCEEEECCCEEEHHCCCCCCC >Mature Secondary Structure TGAEGRPDRRPLARAARYSRWVMRTPWPLFIMGIAQSNLVGALFVLGFLRFGLPPSDRV CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCE ELTELGPTRLIILGFSLFILFVVGAIVSTYLLLPVLRWQYRSPDFESEGSEAVRVRALQM EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHC PFYRTVISVATWLVGGAIFVAVTWSSTHSSVLVAAFATVLGATTTSIIGYLQSERVLRPV HHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIQALRRGVPENVTAPGVIVRQILTWALSTGVPILAIVLTVVGQRAGYLKSNADNLTGSI HHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH LILAIIALAIGLMGTLLVATSIADPLRQLRWALSEVQRGNYNAHVPIYDASELGLLQAGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHCCHHHHCH NDMVRDLGERQRLRDLFGRYVGEDVARRALEYGTELGGQERSVAVLFVDLVGSTQLASTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHCCCHHCCCC GPAVVVRVLNEFFRVIVDTVNKHGGFVNKFQGDAALAIFGAPIDHPDGAAAALAAARELS CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHH GELTNVLGSNDFGIGVSAGRAIAGHIGAQARFEYTVIGDPVNEAARLTELAKNEPGNVLA HHHHHHHCCCCCCCCCCCCCHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCHHH SASAVMEARDEEALRWDVGETVELRGRTVSTQVARPRHG HHHHHHHHCCCHHHCCCCCCEEEECCCEEEHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]