| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is mpb63 [H]
Identifier: 169627566
GI number: 169627566
Start: 461664
End: 462305
Strand: Reverse
Name: mpb63 [H]
Synonym: MAB_0462c
Alternate gene names: 169627566
Gene position: 462305-461664 (Counterclockwise)
Preceding gene: 169627567
Following gene: 169627563
Centisome position: 9.12
GC content: 69.0
Gene sequence:
>642_bases ATGGGTGCACTGCGTCCCCTCGCACTGGCCCTGGCCACGGCCGGGTTTTTCCTCGGTGGGCTGCTGGCCCCACCGTTAGG GCATGCCGCCGGGTCCTGTCCGCACCGCTTCGGGGCCGCCCAACAACTGGCCGACGCCGGCGGCAGCCAGGAATGGACCG TCACCGGCCTGAAGAAGTCGGCCGCCGTCTTGCCCGGCTACGCCCCGGCCGGTCAGCTGTGGGAAGCCTCGGCAACCGTG CGCGCCGAGCGGGGCACCATCACCCCACTCATCCCTAATCTGGCCGCCCACGCCATGGGCGGGCACTACCCGGTGCTCTG GCAAGTGGCCACCGATCAAGGCCTGCCCGCCACCACGCTCGCTGAGGGCCAATCATCTTCGGGCACCATATATTTTGATG TCACCGGGCCAGATCCGGTGGCCGTGGTCTACACCGTGGGCGCCGGTGCGCCGGCGATGATGTGGTGCTGCGAGGCCGCG ATGGGAACGTCTGCGAACACGGCCATGGACCCGGCGATGAAAGCCAAGATGCAAGCCAACATGAAGGCCATGAAGGCCGA CTGCCCGTGCTGTAAGGACCTGCCCGCCGCCGCACCCGGCACCGACTGCCCGTGCTGCGGGCCAACCCCTGCCGGAGCCT AA
Upstream 100 bases:
>100_bases CGCCAATAGCCCTGAACACCAAAGGTGTCGCTGCCCGGCCATCGGTGTCGATCAGCGGGAAAGTGCCATCGACTACACGA CTACGCATAAGGAGATCACC
Downstream 100 bases:
>100_bases CCCAGCACCGCAAGCCCGAGAACCCGCTGCCGCCACCGGCCGGCCCCGCTACACGCCGCTGGCAGTCGGTGGCGGCAGCG GCCGATCAGCACTGCACGTC
Product: hypothetical protein
Products: NA
Alternate protein names: 16 kDa immunoprotective extracellular protein; Antigen MPB63 [H]
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MGALRPLALALATAGFFLGGLLAPPLGHAAGSCPHRFGAAQQLADAGGSQEWTVTGLKKSAAVLPGYAPAGQLWEASATV RAERGTITPLIPNLAAHAMGGHYPVLWQVATDQGLPATTLAEGQSSSGTIYFDVTGPDPVAVVYTVGAGAPAMMWCCEAA MGTSANTAMDPAMKAKMQANMKAMKADCPCCKDLPAAAPGTDCPCCGPTPAGA
Sequences:
>Translated_213_residues MGALRPLALALATAGFFLGGLLAPPLGHAAGSCPHRFGAAQQLADAGGSQEWTVTGLKKSAAVLPGYAPAGQLWEASATV RAERGTITPLIPNLAAHAMGGHYPVLWQVATDQGLPATTLAEGQSSSGTIYFDVTGPDPVAVVYTVGAGAPAMMWCCEAA MGTSANTAMDPAMKAKMQANMKAMKADCPCCKDLPAAAPGTDCPCCGPTPAGA >Mature_212_residues GALRPLALALATAGFFLGGLLAPPLGHAAGSCPHRFGAAQQLADAGGSQEWTVTGLKKSAAVLPGYAPAGQLWEASATVR AERGTITPLIPNLAAHAMGGHYPVLWQVATDQGLPATTLAEGQSSSGTIYFDVTGPDPVAVVYTVGAGAPAMMWCCEAAM GTSANTAMDPAMKAKMQANMKAMKADCPCCKDLPAAAPGTDCPCCGPTPAGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015250 - ProDom: PD886639 [H]
Pfam domain/function: PF09167 DUF1942 [H]
EC number: NA
Molecular weight: Translated: 21356; Mature: 21225
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGALRPLALALATAGFFLGGLLAPPLGHAAGSCPHRFGAAQQLADAGGSQEWTVTGLKKS CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCC AAVLPGYAPAGQLWEASATVRAERGTITPLIPNLAAHAMGGHYPVLWQVATDQGLPATTL CEECCCCCCCCCCEECCCEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEE AEGQSSSGTIYFDVTGPDPVAVVYTVGAGAPAMMWCCEAAMGTSANTAMDPAMKAKMQAN CCCCCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCHHCHHHHHHHHHH MKAMKADCPCCKDLPAAAPGTDCPCCGPTPAGA HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GALRPLALALATAGFFLGGLLAPPLGHAAGSCPHRFGAAQQLADAGGSQEWTVTGLKKS CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCC AAVLPGYAPAGQLWEASATVRAERGTITPLIPNLAAHAMGGHYPVLWQVATDQGLPATTL CEECCCCCCCCCCEECCCEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEE AEGQSSSGTIYFDVTGPDPVAVVYTVGAGAPAMMWCCEAAMGTSANTAMDPAMKAKMQAN CCCCCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCHHCHHHHHHHHHH MKAMKADCPCCKDLPAAAPGTDCPCCGPTPAGA HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]