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The map label for this gene is dppB [H]

Identifier: 169627531

GI number: 169627531

Start: 427600

End: 428571

Strand: Direct

Name: dppB [H]

Synonym: MAB_0427

Alternate gene names: 169627531

Gene position: 427600-428571 (Clockwise)

Preceding gene: 169627530

Following gene: 169627532

Centisome position: 8.44

GC content: 62.14

Gene sequence:

>972_bases
GTGACCACCGTGTTGGGCAACGTTCGACAGTTCTGGCAGAGCGCCGGTCTCTTCCGCTACATCGCCAAGCGGCTGCTGCT
CGCGATACCCGTTCTCATCGGGACGTCGCTGCTCATCTACAGTCTGGTGTACGCGCTGCCGGGTGATCCCATCCGGGCAT
TGGCCGGTGACCGTCCCTTCACTCCCGAAGTCATGGCGCAGCTGCGCGAGCGGTTCCATCTCAACGATCCGTTCTTGGTG
CGATACGGTAAGTACATCGTCGGGTTCCTACACGGCGACTTCGGCACCGACTTTCAGCAACGCCCTGTCGCACAGACTGT
TTCGCAGCGTCTGCCGGTGACCCTGCGGCTCACCGTGGTAGCCGTGGCGTTCGAGACGATCATCGGTATCACCGCCGGCG
TCTTGTGTGCGGTGCGCCGGGGATCGTTCTACGACAACCTGGTCCTGGTCACCACCACGCTCCTGGTCTCGATGCCGGTG
TTCGTGCTGGGCTTCCTGGCGCAGTACCTATTCGGCTTCAAACTCGGCTGGTTCCCCATTGCCGGCATCCGCGACGGGTG
GTACAGCTTCCTGCTGCCGGGATTGGTGCTGGCCTCGCTGTCCATGGCGTACGTCGCCCGGCTGACCCGGACATCGATGC
TGGAGACGATGGATGCCGAGTTCGTCCGTACCGCACGTGCCAAGGGCATTTCCGAATCGCGCATCCTGCTGCGGCACACC
CTGCGTAACAGCCTGATTCCCGTCGTGACCTTCATCGGTGCGGACGTGGGGGCGCTGCTGGCGGGCGCCGTCGTCACCGA
GTCGGTGTTCAACATCCCCGGGCTGGGCCGTGCGACATTCGACGCGGTCCGAAACCAGGAGGGCGCCGTAGTGGTGAGCA
TCCTGACCCTCATTGTGTTTTTCTATATCTTCTTCAATCTCGTCGTCGACATTCTTTACGCGCTGCTGGATCCGAGGATT
CGCTATGAGTGA

Upstream 100 bases:

>100_bases
TCTTCTATGAGGTCAACCAGGCGGTGCATTCCAAGCGGGTGCGCAATGTCAAGATCGGCATCCAGGACTGTATTGAGTAC
GCAGACGTGGAGGTGGTGCA

Downstream 100 bases:

>100_bases
TCCCGTAAACACTCCGGGCCCGGTGTCCGGCCCGGACGCCACCGCCGAGTCCCTGGCGGAACAGGCAGACCTATGGGGCA
ACGCCTGGAAGTATCTGCGC

Product: peptide ABC transporter transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MTTVLGNVRQFWQSAGLFRYIAKRLLLAIPVLIGTSLLIYSLVYALPGDPIRALAGDRPFTPEVMAQLRERFHLNDPFLV
RYGKYIVGFLHGDFGTDFQQRPVAQTVSQRLPVTLRLTVVAVAFETIIGITAGVLCAVRRGSFYDNLVLVTTTLLVSMPV
FVLGFLAQYLFGFKLGWFPIAGIRDGWYSFLLPGLVLASLSMAYVARLTRTSMLETMDAEFVRTARAKGISESRILLRHT
LRNSLIPVVTFIGADVGALLAGAVVTESVFNIPGLGRATFDAVRNQEGAVVVSILTLIVFFYIFFNLVVDILYALLDPRI
RYE

Sequences:

>Translated_323_residues
MTTVLGNVRQFWQSAGLFRYIAKRLLLAIPVLIGTSLLIYSLVYALPGDPIRALAGDRPFTPEVMAQLRERFHLNDPFLV
RYGKYIVGFLHGDFGTDFQQRPVAQTVSQRLPVTLRLTVVAVAFETIIGITAGVLCAVRRGSFYDNLVLVTTTLLVSMPV
FVLGFLAQYLFGFKLGWFPIAGIRDGWYSFLLPGLVLASLSMAYVARLTRTSMLETMDAEFVRTARAKGISESRILLRHT
LRNSLIPVVTFIGADVGALLAGAVVTESVFNIPGLGRATFDAVRNQEGAVVVSILTLIVFFYIFFNLVVDILYALLDPRI
RYE
>Mature_322_residues
TTVLGNVRQFWQSAGLFRYIAKRLLLAIPVLIGTSLLIYSLVYALPGDPIRALAGDRPFTPEVMAQLRERFHLNDPFLVR
YGKYIVGFLHGDFGTDFQQRPVAQTVSQRLPVTLRLTVVAVAFETIIGITAGVLCAVRRGSFYDNLVLVTTTLLVSMPVF
VLGFLAQYLFGFKLGWFPIAGIRDGWYSFLLPGLVLASLSMAYVARLTRTSMLETMDAEFVRTARAKGISESRILLRHTL
RNSLIPVVTFIGADVGALLAGAVVTESVFNIPGLGRATFDAVRNQEGAVVVSILTLIVFFYIFFNLVVDILYALLDPRIR
YE

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=312, Percent_Identity=40.0641025641026, Blast_Score=230, Evalue=1e-61,
Organism=Escherichia coli, GI1789965, Length=338, Percent_Identity=37.2781065088757, Blast_Score=228, Evalue=3e-61,
Organism=Escherichia coli, GI1787497, Length=311, Percent_Identity=35.048231511254, Blast_Score=205, Evalue=3e-54,
Organism=Escherichia coli, GI1789888, Length=310, Percent_Identity=35.8064516129032, Blast_Score=183, Evalue=2e-47,
Organism=Escherichia coli, GI1787761, Length=319, Percent_Identity=33.5423197492163, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1787550, Length=267, Percent_Identity=30.7116104868914, Blast_Score=135, Evalue=5e-33,
Organism=Escherichia coli, GI1788504, Length=359, Percent_Identity=26.4623955431755, Blast_Score=114, Evalue=9e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35852; Mature: 35721

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTVLGNVRQFWQSAGLFRYIAKRLLLAIPVLIGTSLLIYSLVYALPGDPIRALAGDRPF
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCC
TPEVMAQLRERFHLNDPFLVRYGKYIVGFLHGDFGTDFQQRPVAQTVSQRLPVTLRLTVV
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHCCCHHHHHHH
AVAFETIIGITAGVLCAVRRGSFYDNLVLVTTTLLVSMPVFVLGFLAQYLFGFKLGWFPI
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEC
AGIRDGWYSFLLPGLVLASLSMAYVARLTRTSMLETMDAEFVRTARAKGISESRILLRHT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LRNSLIPVVTFIGADVGALLAGAVVTESVFNIPGLGRATFDAVRNQEGAVVVSILTLIVF
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
FYIFFNLVVDILYALLDPRIRYE
HHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TTVLGNVRQFWQSAGLFRYIAKRLLLAIPVLIGTSLLIYSLVYALPGDPIRALAGDRPF
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCC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HHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]