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The map label for this gene is degQ [C]

Identifier: 169627525

GI number: 169627525

Start: 420022

End: 421287

Strand: Direct

Name: degQ [C]

Synonym: MAB_0421

Alternate gene names: 169627525

Gene position: 420022-421287 (Clockwise)

Preceding gene: 169627524

Following gene: 169627528

Centisome position: 8.29

GC content: 65.09

Gene sequence:

>1266_bases
ATGAATCTGAATCCGTCGCAGTGGCTCGATATCGGTGTCATCGCTGTCGCTTTCATCGCCGCGGTATCCGGATGGCGTTC
CGGCGCACTGGGCTCCCTGATGTCTTTCGTCGGGGTGATCTTGGGTGCGGTGGCGGGCATCATGCTGGCGCCGCATGTGG
TGGCCAATATCGAGGGTTCGCGCACCAAGCTCTTTGCCTCGCTGCTGCTCATCCTGGTACTGGTGGTCATCGGCGAGGTC
GCCGGCGTGGTGTTGGGCCGGGCGATGCGTGGCGCCATCAGAAATCGAGTGCTGCGCACCGGCGATTCGGTGGTGGGTGT
GGTGCTGCAGGTGGCCGCGGTTCTGGTGGCCGCGTGGCTGCTCTCCATCCCGATGCAGAGCTCCAATCAACCGAATATCT
CTGCGGCAGCGCGTGAATCGAAGGTGCTGAGCCAGGTCGACAAGTACGCCCCCGACCAGCTGCGCAAGGTGCCCAACGAC
CTGTCGAAGCTGTTGGACACCTCCGGGTTGCCCAGCGTGCTGCAGCCGTTTGGCAAGACACCGATCGCCGCGGTGGACGC
ACCCGACGCGACGCTTGCCGACGGTCCGGTGGTGCGGGGGTCGGAGCCGAGCGTCGTCAAGATCAAGGGCATCGCACGCA
GCTGCCAAAAATCGCTGGAGGGAACCGGATTCGTCATCGCGCCGCATCGGGTCATGTCGAACGCTCACGTCGTGGCCGGC
ACCAACAGCGTGACCGTCGAGTCGGCGGGGCAGACCTACGACGCCAGTGTGGTGTCCTATGACCCGAACGCCGACATCTC
GATTCTCGCGGTGCCCGATATGCCCGCGGCGCCGTTGGTGTTCGCGTCCAAACCGGCCAAGACCGGTGACGACGCGATCG
TCCTCGGGTACCCGGGCGGTGGGGATTACAAGGCGTCACCGGCGCGGGTGCGCGAGATCATCGAACTGAAGGGACCGGAC
ATCTACCGCTCCATCACGGTGACCCGCGAGGTGTACACCGTCAGGGGCTCGGTGCTACAAGGTAATTCGGGCGGTCCGTT
GATCGATACGGAAGGCCGTGTGCTCGGTGTGGTCTTCGGGGCGGCGATCGACGATGACGACACCGGTTTCGCGCTCACTG
CCAAGCAGGTCAAGGATCAGCTCGCCAAGGCGGACCTAGCCGACCCTGTGGCCACCGGCAGTTGCGTCTCCGCGGCCGAA
GCCAATAGGCCGACCGAGCAGCCCGTCAACGGCCCGCAGTCACCGGTGCCCGGTAAAGCGCCGTAG

Upstream 100 bases:

>100_bases
TCTCGGCGATGTTGGAGGTGTCCGGCTGGGCGCAGCCATGGGACACTCATAACCTCCGTGATCTTGATGAGCTGCTGGCC
GAGCACCTGGGAGGGTCGGT

Downstream 100 bases:

>100_bases
ATGTTCGTTCACAGCGGCGGGGTCTTCCTCGTGGACGTAGTGGCCCACCCCGCGTAGCGCGACGAACTGCCCGTTGGGCG
CGTACGGCAGTGAGCGATGC

Product: membrane-associated serine protease

Products: NA

Alternate protein names: Colicin V Production Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Membrane-Associated Serine Protease; Protease; Trypsin-Like Serine Protease; Peptidase; Serine Peptidase; PDZ/DHR/GLGF Domain Protein; Serine Proteinase; Trypsin-Like Serine Protease With C-Terminal PDZ Domain; PDZ/DHR/GLGF Domain-Containing Protein; S1C Family Peptidase

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MNLNPSQWLDIGVIAVAFIAAVSGWRSGALGSLMSFVGVILGAVAGIMLAPHVVANIEGSRTKLFASLLLILVLVVIGEV
AGVVLGRAMRGAIRNRVLRTGDSVVGVVLQVAAVLVAAWLLSIPMQSSNQPNISAAARESKVLSQVDKYAPDQLRKVPND
LSKLLDTSGLPSVLQPFGKTPIAAVDAPDATLADGPVVRGSEPSVVKIKGIARSCQKSLEGTGFVIAPHRVMSNAHVVAG
TNSVTVESAGQTYDASVVSYDPNADISILAVPDMPAAPLVFASKPAKTGDDAIVLGYPGGGDYKASPARVREIIELKGPD
IYRSITVTREVYTVRGSVLQGNSGGPLIDTEGRVLGVVFGAAIDDDDTGFALTAKQVKDQLAKADLADPVATGSCVSAAE
ANRPTEQPVNGPQSPVPGKAP

Sequences:

>Translated_421_residues
MNLNPSQWLDIGVIAVAFIAAVSGWRSGALGSLMSFVGVILGAVAGIMLAPHVVANIEGSRTKLFASLLLILVLVVIGEV
AGVVLGRAMRGAIRNRVLRTGDSVVGVVLQVAAVLVAAWLLSIPMQSSNQPNISAAARESKVLSQVDKYAPDQLRKVPND
LSKLLDTSGLPSVLQPFGKTPIAAVDAPDATLADGPVVRGSEPSVVKIKGIARSCQKSLEGTGFVIAPHRVMSNAHVVAG
TNSVTVESAGQTYDASVVSYDPNADISILAVPDMPAAPLVFASKPAKTGDDAIVLGYPGGGDYKASPARVREIIELKGPD
IYRSITVTREVYTVRGSVLQGNSGGPLIDTEGRVLGVVFGAAIDDDDTGFALTAKQVKDQLAKADLADPVATGSCVSAAE
ANRPTEQPVNGPQSPVPGKAP
>Mature_421_residues
MNLNPSQWLDIGVIAVAFIAAVSGWRSGALGSLMSFVGVILGAVAGIMLAPHVVANIEGSRTKLFASLLLILVLVVIGEV
AGVVLGRAMRGAIRNRVLRTGDSVVGVVLQVAAVLVAAWLLSIPMQSSNQPNISAAARESKVLSQVDKYAPDQLRKVPND
LSKLLDTSGLPSVLQPFGKTPIAAVDAPDATLADGPVVRGSEPSVVKIKGIARSCQKSLEGTGFVIAPHRVMSNAHVVAG
TNSVTVESAGQTYDASVVSYDPNADISILAVPDMPAAPLVFASKPAKTGDDAIVLGYPGGGDYKASPARVREIIELKGPD
IYRSITVTREVYTVRGSVLQGNSGGPLIDTEGRVLGVVFGAAIDDDDTGFALTAKQVKDQLAKADLADPVATGSCVSAAE
ANRPTEQPVNGPQSPVPGKAP

Specific function: Protease With A Shared Specificity With Degp. [C]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.21.- [C]

Molecular weight: Translated: 43371; Mature: 43371

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS00201 FLAVODOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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C
>Mature Secondary Structure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C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA