Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

Click here to switch to the map view.

The map label for this gene is 169627528

Identifier: 169627528

GI number: 169627528

Start: 423027

End: 423722

Strand: Direct

Name: 169627528

Synonym: MAB_0424

Alternate gene names: NA

Gene position: 423027-423722 (Clockwise)

Preceding gene: 169627525

Following gene: 169627530

Centisome position: 8.35

GC content: 63.94

Gene sequence:

>696_bases
ATGCGGTACGGGTTGCCGGTCCTGATTGCGCTGTTTGGCCTGTTCGCGGCCGCGATACCGGCCGCAGCGGCTCCGGCGGC
GGGTGCCGACGACAAGGTGCCGATGGGCGGCGGAGCCGGGCTCATCATCAACGGCGACACCCTGTGCACGCTGACGACGA
TCGGCCACGACGGCAAGGGCAATCTCGTGGGCTTTACCTCCGCACACTGCGGCGGCGCCGGCTCGCAGGTGGCCTCCGAG
GACTTTCCCAAGAAGGGTGTGCTGGGCAAGTTCGTCAACGGAAACGAGCAGTACGACTACGCCACCATCCAGTTCGATCC
GGAGAAGGTACAGCCGGTGTCCACCTACAAGGGCTTCACCATCACCGGAATCGGGCCTGATCCTCAGCCGGGTGATATCG
CCTGCAAGCTGGGACGCACCACCGGCAACTCGTGTGGGGTGACATTCGGGGCAGGAGCCGAGCCGGGCACATTCATCAAC
CAGGTTTGTGGCCAGCCGGGTGACTCGGGAGCTCCGGTGACTGTGAACGGACAGCTGGTCGGCATGATCCATGGCGCGGC
CACCAAGCTGCCCGTGTGCGTCATCAAATACATTCCATTGCATACGCCGACCACCACGTACTCGATCAACACCGTGCTGG
CCGATATCAACGCCAAGAACCGTACCGCCGGAGTGGGTTTCACCCCGGTCGGCTAG

Upstream 100 bases:

>100_bases
AGTGTGAATCTTGATTAGAATGGCGTACGCGTGGCCGACCGGGGGAGAGATGCGGCCGGAGTGAGAAGGGCTGCTGGACA
TGAGGTCATCTGGGCGACGG

Downstream 100 bases:

>100_bases
TTCTCATGCATCTTCTTATGCATCGACACGCCGTTTTGTGATGCATTTCGCGAGTAAGGCTCGCAAAACGCGGCGTGTCG
ACGCAGTATGGGGAACGGCG

Product: putative protease

Products: NA

Alternate protein names: Protease; S1 Family Peptidase; Peptidase S1 And S6 Chymotrypsin/Hap; Peptidase; Peptidase S1 Family Protein

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MRYGLPVLIALFGLFAAAIPAAAAPAAGADDKVPMGGGAGLIINGDTLCTLTTIGHDGKGNLVGFTSAHCGGAGSQVASE
DFPKKGVLGKFVNGNEQYDYATIQFDPEKVQPVSTYKGFTITGIGPDPQPGDIACKLGRTTGNSCGVTFGAGAEPGTFIN
QVCGQPGDSGAPVTVNGQLVGMIHGAATKLPVCVIKYIPLHTPTTTYSINTVLADINAKNRTAGVGFTPVG

Sequences:

>Translated_231_residues
MRYGLPVLIALFGLFAAAIPAAAAPAAGADDKVPMGGGAGLIINGDTLCTLTTIGHDGKGNLVGFTSAHCGGAGSQVASE
DFPKKGVLGKFVNGNEQYDYATIQFDPEKVQPVSTYKGFTITGIGPDPQPGDIACKLGRTTGNSCGVTFGAGAEPGTFIN
QVCGQPGDSGAPVTVNGQLVGMIHGAATKLPVCVIKYIPLHTPTTTYSINTVLADINAKNRTAGVGFTPVG
>Mature_231_residues
MRYGLPVLIALFGLFAAAIPAAAAPAAGADDKVPMGGGAGLIINGDTLCTLTTIGHDGKGNLVGFTSAHCGGAGSQVASE
DFPKKGVLGKFVNGNEQYDYATIQFDPEKVQPVSTYKGFTITGIGPDPQPGDIACKLGRTTGNSCGVTFGAGAEPGTFIN
QVCGQPGDSGAPVTVNGQLVGMIHGAATKLPVCVIKYIPLHTPTTTYSINTVLADINAKNRTAGVGFTPVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23296; Mature: 23296

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYGLPVLIALFGLFAAAIPAAAAPAAGADDKVPMGGGAGLIINGDTLCTLTTIGHDGKG
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEECCCCCC
NLVGFTSAHCGGAGSQVASEDFPKKGVLGKFVNGNEQYDYATIQFDPEKVQPVSTYKGFT
CEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEECHHHCCEECCCCCEE
ITGIGPDPQPGDIACKLGRTTGNSCGVTFGAGAEPGTFINQVCGQPGDSGAPVTVNGQLV
EEECCCCCCCCCEEEEECCCCCCCCCEEECCCCCCCHHHHHHHCCCCCCCCCEEECCEEE
GMIHGAATKLPVCVIKYIPLHTPTTTYSINTVLADINAKNRTAGVGFTPVG
EEEECCCCCCEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRYGLPVLIALFGLFAAAIPAAAAPAAGADDKVPMGGGAGLIINGDTLCTLTTIGHDGKG
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEECCCCCC
NLVGFTSAHCGGAGSQVASEDFPKKGVLGKFVNGNEQYDYATIQFDPEKVQPVSTYKGFT
CEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEECHHHCCEECCCCCEE
ITGIGPDPQPGDIACKLGRTTGNSCGVTFGAGAEPGTFINQVCGQPGDSGAPVTVNGQLV
EEECCCCCCCCCEEEEECCCCCCCCCEEECCCCCCCHHHHHHHCCCCCCCCCEEECCEEE
GMIHGAATKLPVCVIKYIPLHTPTTTYSINTVLADINAKNRTAGVGFTPVG
EEEECCCCCCEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA