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The map label for this gene is nudL [H]

Identifier: 169627524

GI number: 169627524

Start: 419261

End: 420025

Strand: Direct

Name: nudL [H]

Synonym: MAB_0420

Alternate gene names: 169627524

Gene position: 419261-420025 (Clockwise)

Preceding gene: 169627523

Following gene: 169627525

Centisome position: 8.27

GC content: 66.14

Gene sequence:

>765_bases
GTGACAGCCGATGAGCCATTCGCGCGAAGAGGATTGGCGACAGCGCCGCTGAGTCCCGATGCCGCCCCGGACTGGATGCG
CCCCTTGGTGGACAACGCCGCCAGTGTGAAGGACATCTACGGCAGGGGCGTGCACCCTGCGGTCAAAGCGATCCTGCAAG
CGCGCAAGTTGCCGTCTTCCGGCCGTCCGGCCGCCGTTCTGGTATTGGTGTCTGCCGATGGCGCCGTGACCGACCCGACC
GAGGCGGACCTGCTGCTGACGGTGCGGGCATCGACCCTGCGCCAGCACAGCGGACAGGTGTCGTTCCCGGGCGGCGCCAC
CGACCCGGGCGACGGCGGCCCGGTAGGCACGGCCTTGCGTGAGGCTCAGGAGGAAACGGGCCTGGACCCCGCCCGCGTAC
AACCGTTGACGGTGATGGAATCGCTATTCATCCCCCCGTCCGGTTTTCACGTCTCGCCGGTGCTGGCGTACTCGCCCGAC
CCCGGCCCGGTGCTTGCCGTTGATCCCGGCGAGACCGCGGAGGTGTCGCGGGTAAAGATCGGTGACCTTGTCGACCCCAC
CAATCGGATCATGGTGACCAAGAAGACATTTGGAATTCGCTATAGCGGCCCGGCCTTCCTGCTGCCGGGGATGTTGGTCT
GGGGTTTCACCGGGCAGATCATCTCGGCGATGTTGGAGGTGTCCGGCTGGGCGCAGCCATGGGACACTCATAACCTCCGT
GATCTTGATGAGCTGCTGGCCGAGCACCTGGGAGGGTCGGTATGA

Upstream 100 bases:

>100_bases
CGCGGACGGTAGCGTTGCCCAAGTGCTACCGCGTTCGTTCACTTCGGCGGATGAGATCGGTGCTGAAGTGGAACAAGCGT
TGGGAATGAGGTTCTAGGTC

Downstream 100 bases:

>100_bases
ATCTGAATCCGTCGCAGTGGCTCGATATCGGTGTCATCGCTGTCGCTTTCATCGCCGCGGTATCCGGATGGCGTTCCGGC
GCACTGGGCTCCCTGATGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MTADEPFARRGLATAPLSPDAAPDWMRPLVDNAASVKDIYGRGVHPAVKAILQARKLPSSGRPAAVLVLVSADGAVTDPT
EADLLLTVRASTLRQHSGQVSFPGGATDPGDGGPVGTALREAQEETGLDPARVQPLTVMESLFIPPSGFHVSPVLAYSPD
PGPVLAVDPGETAEVSRVKIGDLVDPTNRIMVTKKTFGIRYSGPAFLLPGMLVWGFTGQIISAMLEVSGWAQPWDTHNLR
DLDELLAEHLGGSV

Sequences:

>Translated_254_residues
MTADEPFARRGLATAPLSPDAAPDWMRPLVDNAASVKDIYGRGVHPAVKAILQARKLPSSGRPAAVLVLVSADGAVTDPT
EADLLLTVRASTLRQHSGQVSFPGGATDPGDGGPVGTALREAQEETGLDPARVQPLTVMESLFIPPSGFHVSPVLAYSPD
PGPVLAVDPGETAEVSRVKIGDLVDPTNRIMVTKKTFGIRYSGPAFLLPGMLVWGFTGQIISAMLEVSGWAQPWDTHNLR
DLDELLAEHLGGSV
>Mature_253_residues
TADEPFARRGLATAPLSPDAAPDWMRPLVDNAASVKDIYGRGVHPAVKAILQARKLPSSGRPAAVLVLVSADGAVTDPTE
ADLLLTVRASTLRQHSGQVSFPGGATDPGDGGPVGTALREAQEETGLDPARVQPLTVMESLFIPPSGFHVSPVLAYSPDP
GPVLAVDPGETAEVSRVKIGDLVDPTNRIMVTKKTFGIRYSGPAFLLPGMLVWGFTGQIISAMLEVSGWAQPWDTHNLRD
LDELLAEHLGGSV

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Drosophila melanogaster, GI18859683, Length=193, Percent_Identity=31.6062176165803, Blast_Score=77, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 26725; Mature: 26593

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS01293 UPF0035

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTADEPFARRGLATAPLSPDAAPDWMRPLVDNAASVKDIYGRGVHPAVKAILQARKLPSS
CCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHCCCCC
GRPAAVLVLVSADGAVTDPTEADLLLTVRASTLRQHSGQVSFPGGATDPGDGGPVGTALR
CCCEEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHCCCCEECCCCCCCCCCCCCHHHHHH
EAQEETGLDPARVQPLTVMESLFIPPSGFHVSPVLAYSPDPGPVLAVDPGETAEVSRVKI
HHHHHHCCCHHHCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCEEEE
GDLVDPTNRIMVTKKTFGIRYSGPAFLLPGMLVWGFTGQIISAMLEVSGWAQPWDTHNLR
CCCCCCCCCEEEEEEECCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
DLDELLAEHLGGSV
HHHHHHHHHHCCCC
>Mature Secondary Structure 
TADEPFARRGLATAPLSPDAAPDWMRPLVDNAASVKDIYGRGVHPAVKAILQARKLPSS
CCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHCCCCC
GRPAAVLVLVSADGAVTDPTEADLLLTVRASTLRQHSGQVSFPGGATDPGDGGPVGTALR
CCCEEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHCCCCEECCCCCCCCCCCCCHHHHHH
EAQEETGLDPARVQPLTVMESLFIPPSGFHVSPVLAYSPDPGPVLAVDPGETAEVSRVKI
HHHHHHCCCHHHCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCEEEE
GDLVDPTNRIMVTKKTFGIRYSGPAFLLPGMLVWGFTGQIISAMLEVSGWAQPWDTHNLR
CCCCCCCCCEEEEEEECCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
DLDELLAEHLGGSV
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]