| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627523
Identifier: 169627523
GI number: 169627523
Start: 418604
End: 419257
Strand: Direct
Name: 169627523
Synonym: MAB_0419
Alternate gene names: NA
Gene position: 418604-419257 (Clockwise)
Preceding gene: 169627522
Following gene: 169627524
Centisome position: 8.26
GC content: 66.36
Gene sequence:
>654_bases GTGGCCCGACTCAACACCGGGGCCCGGTGGACGATCGCCGGGGTGGTGCTGGTCGCGGCGCTGATCGCCGTCATGTTGTC GCAGCAACACGATCAGCAGCGGCGCGGACCACAGGGGCAGCAGCAGGTAGCAGCCCGCGAGCGCCGAGATGCTGAGACCC CCGAAGCCCTGGCGGAGTTGCGGCGTCAGGCGCAATTGCCCTCGTGTCCGGCGGCGAATCCCGATCCGGGCACGCCGGCA CTGGCCGGGATAACGCTGGAATGCAGCGGCGTGCGGGTTCCGGTGGGGCCGGTACTTGCCGGGCGACAGGTGGTGCTGAA TCTGTGGGCCTACTGGTGCGGACCCTGCGCAGATGAGCTGCCCGCCATGGCCGAATTGCAGCGCCGCGCCGGTGACAAGC TAACCGTCATCACGGTGCACCAGGACGAGAACGAGGCCGCCGGGTTGAACAGGCTCGCCGAGTTGCACGTGCGCCTGCCA ATGATCCAGGACGGCGCTCGTCGTATCGCGGCCGCGCTGAAGTCACCGAATGTCATGCCCACCACGATTTTGATACGCGC GGACGGTAGCGTTGCCCAAGTGCTACCGCGTTCGTTCACTTCGGCGGATGAGATCGGTGCTGAAGTGGAACAAGCGTTGG GAATGAGGTTCTAG
Upstream 100 bases:
>100_bases TGTCCGTCCTATGGCCTGGGCCCGACGGACCCGGAGGTGGCTGCGCCACTGGTGAAGGGCCCGGAGACCGAGCACCTGCT GGCGTTGGCCGGGTTGTGAC
Downstream 100 bases:
>100_bases GTCGTGACAGCCGATGAGCCATTCGCGCGAAGAGGATTGGCGACAGCGCCGCTGAGTCCCGATGCCGCCCCGGACTGGAT GCGCCCCTTGGTGGACAACG
Product: hypothetical protein
Products: NA
Alternate protein names: Thiol-Disulfide Oxidoreductase; Thiol-Disulfide Isomerase-Like Thioredoxin; Redoxin; Thioredoxin; Secreted Protein; Thioredoxin-Like; ThiolDisulfide Interchange Protein; Redoxin Domain Protein; Membrane-Anchored Thioredoxin-Like Protein; LOW QUALITY PROTEIN Membrane-Anchored Thioredoxin
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MARLNTGARWTIAGVVLVAALIAVMLSQQHDQQRRGPQGQQQVAARERRDAETPEALAELRRQAQLPSCPAANPDPGTPA LAGITLECSGVRVPVGPVLAGRQVVLNLWAYWCGPCADELPAMAELQRRAGDKLTVITVHQDENEAAGLNRLAELHVRLP MIQDGARRIAAALKSPNVMPTTILIRADGSVAQVLPRSFTSADEIGAEVEQALGMRF
Sequences:
>Translated_217_residues MARLNTGARWTIAGVVLVAALIAVMLSQQHDQQRRGPQGQQQVAARERRDAETPEALAELRRQAQLPSCPAANPDPGTPA LAGITLECSGVRVPVGPVLAGRQVVLNLWAYWCGPCADELPAMAELQRRAGDKLTVITVHQDENEAAGLNRLAELHVRLP MIQDGARRIAAALKSPNVMPTTILIRADGSVAQVLPRSFTSADEIGAEVEQALGMRF >Mature_216_residues ARLNTGARWTIAGVVLVAALIAVMLSQQHDQQRRGPQGQQQVAARERRDAETPEALAELRRQAQLPSCPAANPDPGTPAL AGITLECSGVRVPVGPVLAGRQVVLNLWAYWCGPCADELPAMAELQRRAGDKLTVITVHQDENEAAGLNRLAELHVRLPM IQDGARRIAAALKSPNVMPTTILIRADGSVAQVLPRSFTSADEIGAEVEQALGMRF
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23287; Mature: 23156
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLNTGARWTIAGVVLVAALIAVMLSQQHDQQRRGPQGQQQVAARERRDAETPEALAEL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHH RRQAQLPSCPAANPDPGTPALAGITLECSGVRVPVGPVLAGRQVVLNLWAYWCGPCADEL HHHHCCCCCCCCCCCCCCCCEEEEEEEECCEECCCCHHHHHHHHHHHHHHHHHCCCHHHH PAMAELQRRAGDKLTVITVHQDENEAAGLNRLAELHVRLPMIQDGARRIAAALKSPNVMP HHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC TTILIRADGSVAQVLPRSFTSADEIGAEVEQALGMRF EEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure ARLNTGARWTIAGVVLVAALIAVMLSQQHDQQRRGPQGQQQVAARERRDAETPEALAEL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHH RRQAQLPSCPAANPDPGTPALAGITLECSGVRVPVGPVLAGRQVVLNLWAYWCGPCADEL HHHHCCCCCCCCCCCCCCCCEEEEEEEECCEECCCCHHHHHHHHHHHHHHHHHCCCHHHH PAMAELQRRAGDKLTVITVHQDENEAAGLNRLAELHVRLPMIQDGARRIAAALKSPNVMP HHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC TTILIRADGSVAQVLPRSFTSADEIGAEVEQALGMRF EEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA