| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627415
Identifier: 169627415
GI number: 169627415
Start: 313565
End: 314935
Strand: Reverse
Name: 169627415
Synonym: MAB_0311c
Alternate gene names: NA
Gene position: 314935-313565 (Counterclockwise)
Preceding gene: 169627416
Following gene: 169627414
Centisome position: 6.22
GC content: 61.2
Gene sequence:
>1371_bases GTGCCTATCGCATCGGGATCGGCGCACGCCGAGGGAGTGAACCGGCTACTGCGAAGTTACCGGGCCATTCCCACGACGGC GACTGTCCGCTTGGCTAAGCCCACGTCAAATCTGTTCCGCGCAAGGGCAAAGCCGACTACACCGGGCCTGGATACTTCGG GGCTTACCGGTGTCATCGACGTGGACCCCGTCAACAGGACGGCCGAGGTGGCCGGCATGTGCACGTACGAAGACCTGGTG GCCGCCACGCTTGCCCACGGACTCTCACCACTGGTCGTACCGCAACTCAAGACGATCACGCTGGGCGGAGCGGTAACTGG ACTCGGCATCGAATCGGCGTCCTTCCGCAATGGGCTTCCACACGAGTCGGTTCTGGAGATGGACATCCTCACCGGCTCCG GTGAGATAGTCACGGCAGCACCGGATCGTCTGGCGGATCTGTACCGGGGATTTCCCAACTCATACGGCACACTGGGCTAC TCGGTGCGCCTGCGCATCCAACTAGAACCCGTCAAGCCATTCGTGGCCCTGCGGCACATAAGATTCCACAGCCTCGAAGA ACTGGTGTCGGTCATGGAATCGATCGTGAACACCGCCGCCTACGAGGGCGAGTCCGTGGACTATCTCGATGGCGTGGTGT TCGCCGCCGACGAGTGCTACCTATCCTTAGGTGCTCTGACGGCTGCGCCAGGCCCAGTGAGCGACTACACGGGGCAACGC GTCTACTACCGATCCATTCAGCACCCCGACGGAATCAGCAACGACCGCCTGACAATTCACGACTACCTATGGCGCTGGGA TACCGACTGGTTCTGGTGTTCCCGGGCCTTCGGGGCGCAGAATCCGGGTATCCGCCGGCTGTGGCCGCGGAAGTACCGGC GCAGCAGCGTGTACTGGAAGCTGATCGCCCTGGACCAGCGCTATGACATCGCCGACCGTATCGAGAGGTTTAACGGGCGA CCCGCCCGGGAACGTGTGGTTCAGGACGTCGAGGTACCGATCTCGCGCACCCCGGAGTTTCTGCGCTGGTTCCTCGATGA AATACCGATCGAACCGGTGTGGGTGTGTCCGTTGCGGTTACGTGACAGCGAAGGCTGGCCGCTGTACCCGATACGGCCGG GGCAGACATATGTCAACATCGGGTTTTGGTCATCGGTGCCCGCGGGCGCCGTCGAGGGAGCGACTAATCGGCTCATCGAA CGCAAGGTCAGTGAGTTAGGAGGACACAAGTCGTTGTATTCCGAATCCTTCTATACACGCGATGAATTCGAGCCCCTCTA CGGTGGCGAGCACTACCAGACGCTGAAGAAGACGTACGACCCGGATAACCGATTGCTGGATCTCTATGCGAAGGCGGTGC GGCGACAATGA
Upstream 100 bases:
>100_bases CCGATTCGGCTAGGACGATTGTCCCTCGGCTAGGCACGTTTTGGTCGCCTAATCGAGATCTCGGGTGCGGACCGCCCCGA AGCGGGCTAGCGTAGAAACT
Downstream 100 bases:
>100_bases CAACGACACAGGCCAAGAATGCGCGGGGCGAAAACGGCAAGCTTTCGCTGGCCGAAATCTTGGAACTCATGGCAGCCGGT GACCTGCCGCTGCGCTTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: FAD Linked Oxidase Domain Protein; FAD Linked Oxidase-Like Protein; Oxidoreductase; Dehydrogenase; FAD Linked Oxidase-Like; FAD/FMN-Dependent Dehydrogenase; FAD Linked Oxidase; FAD/FMN-Containing Dehydrogenase; Fad-Dependent Oxidoreductase
Number of amino acids: Translated: 456; Mature: 455
Protein sequence:
>456_residues MPIASGSAHAEGVNRLLRSYRAIPTTATVRLAKPTSNLFRARAKPTTPGLDTSGLTGVIDVDPVNRTAEVAGMCTYEDLV AATLAHGLSPLVVPQLKTITLGGAVTGLGIESASFRNGLPHESVLEMDILTGSGEIVTAAPDRLADLYRGFPNSYGTLGY SVRLRIQLEPVKPFVALRHIRFHSLEELVSVMESIVNTAAYEGESVDYLDGVVFAADECYLSLGALTAAPGPVSDYTGQR VYYRSIQHPDGISNDRLTIHDYLWRWDTDWFWCSRAFGAQNPGIRRLWPRKYRRSSVYWKLIALDQRYDIADRIERFNGR PARERVVQDVEVPISRTPEFLRWFLDEIPIEPVWVCPLRLRDSEGWPLYPIRPGQTYVNIGFWSSVPAGAVEGATNRLIE RKVSELGGHKSLYSESFYTRDEFEPLYGGEHYQTLKKTYDPDNRLLDLYAKAVRRQ
Sequences:
>Translated_456_residues MPIASGSAHAEGVNRLLRSYRAIPTTATVRLAKPTSNLFRARAKPTTPGLDTSGLTGVIDVDPVNRTAEVAGMCTYEDLV AATLAHGLSPLVVPQLKTITLGGAVTGLGIESASFRNGLPHESVLEMDILTGSGEIVTAAPDRLADLYRGFPNSYGTLGY SVRLRIQLEPVKPFVALRHIRFHSLEELVSVMESIVNTAAYEGESVDYLDGVVFAADECYLSLGALTAAPGPVSDYTGQR VYYRSIQHPDGISNDRLTIHDYLWRWDTDWFWCSRAFGAQNPGIRRLWPRKYRRSSVYWKLIALDQRYDIADRIERFNGR PARERVVQDVEVPISRTPEFLRWFLDEIPIEPVWVCPLRLRDSEGWPLYPIRPGQTYVNIGFWSSVPAGAVEGATNRLIE RKVSELGGHKSLYSESFYTRDEFEPLYGGEHYQTLKKTYDPDNRLLDLYAKAVRRQ >Mature_455_residues PIASGSAHAEGVNRLLRSYRAIPTTATVRLAKPTSNLFRARAKPTTPGLDTSGLTGVIDVDPVNRTAEVAGMCTYEDLVA ATLAHGLSPLVVPQLKTITLGGAVTGLGIESASFRNGLPHESVLEMDILTGSGEIVTAAPDRLADLYRGFPNSYGTLGYS VRLRIQLEPVKPFVALRHIRFHSLEELVSVMESIVNTAAYEGESVDYLDGVVFAADECYLSLGALTAAPGPVSDYTGQRV YYRSIQHPDGISNDRLTIHDYLWRWDTDWFWCSRAFGAQNPGIRRLWPRKYRRSSVYWKLIALDQRYDIADRIERFNGRP ARERVVQDVEVPISRTPEFLRWFLDEIPIEPVWVCPLRLRDSEGWPLYPIRPGQTYVNIGFWSSVPAGAVEGATNRLIER KVSELGGHKSLYSESFYTRDEFEPLYGGEHYQTLKKTYDPDNRLLDLYAKAVRRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI13375618, Length=419, Percent_Identity=24.8210023866348, Blast_Score=119, Evalue=9e-27, Organism=Caenorhabditis elegans, GI17568041, Length=440, Percent_Identity=22.9545454545455, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17570305, Length=428, Percent_Identity=21.4953271028037, Blast_Score=94, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51215; Mature: 51083
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIASGSAHAEGVNRLLRSYRAIPTTATVRLAKPTSNLFRARAKPTTPGLDTSGLTGVID CCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCEEEEE VDPVNRTAEVAGMCTYEDLVAATLAHGLSPLVVPQLKTITLGGAVTGLGIESASFRNGLP CCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEECCCCCCHHHCCCC HESVLEMDILTGSGEIVTAAPDRLADLYRGFPNSYGTLGYSVRLRIQLEPVKPFVALRHI CCHHEEEEEEECCCCEEECCCHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCHHHHHHHH RFHSLEELVSVMESIVNTAAYEGESVDYLDGVVFAADECYLSLGALTAAPGPVSDYTGQR HHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEEECHHHHHHHHHHHCCCCCCCCCCCCE VYYRSIQHPDGISNDRLTIHDYLWRWDTDWFWCSRAFGAQNPGIRRLWPRKYRRSSVYWK EEEECCCCCCCCCCCCEEEEEEHEEECCCHHHHHHHCCCCCCCCHHHCHHHHHCCCEEEE LIALDQRYDIADRIERFNGRPARERVVQDVEVPISRTPEFLRWFLDEIPIEPVWVCPLRL EEEECCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEEEE RDSEGWPLYPIRPGQTYVNIGFWSSVPAGAVEGATNRLIERKVSELGGHKSLYSESFYTR ECCCCCEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCC DEFEPLYGGEHYQTLKKTYDPDNRLLDLYAKAVRRQ CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCC >Mature Secondary Structure PIASGSAHAEGVNRLLRSYRAIPTTATVRLAKPTSNLFRARAKPTTPGLDTSGLTGVID CCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCEEEEE VDPVNRTAEVAGMCTYEDLVAATLAHGLSPLVVPQLKTITLGGAVTGLGIESASFRNGLP CCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEECCCCCCHHHCCCC HESVLEMDILTGSGEIVTAAPDRLADLYRGFPNSYGTLGYSVRLRIQLEPVKPFVALRHI CCHHEEEEEEECCCCEEECCCHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCHHHHHHHH RFHSLEELVSVMESIVNTAAYEGESVDYLDGVVFAADECYLSLGALTAAPGPVSDYTGQR HHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEEECHHHHHHHHHHHCCCCCCCCCCCCE VYYRSIQHPDGISNDRLTIHDYLWRWDTDWFWCSRAFGAQNPGIRRLWPRKYRRSSVYWK EEEECCCCCCCCCCCCEEEEEEHEEECCCHHHHHHHCCCCCCCCHHHCHHHHHCCCEEEE LIALDQRYDIADRIERFNGRPARERVVQDVEVPISRTPEFLRWFLDEIPIEPVWVCPLRL EEEECCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEEEE RDSEGWPLYPIRPGQTYVNIGFWSSVPAGAVEGATNRLIERKVSELGGHKSLYSESFYTR ECCCCCEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCC DEFEPLYGGEHYQTLKKTYDPDNRLLDLYAKAVRRQ CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA