| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627379
Identifier: 169627379
GI number: 169627379
Start: 272701
End: 273252
Strand: Reverse
Name: 169627379
Synonym: MAB_0274c
Alternate gene names: NA
Gene position: 273252-272701 (Counterclockwise)
Preceding gene: 169627382
Following gene: 169627378
Centisome position: 5.39
GC content: 61.59
Gene sequence:
>552_bases ATGACATCGACGTCTGATCTTTTCGCGCTGGAGCATGGGACCACCACGCAGGAAGCGCTGACCTTCTTCGACAATCTGGA GCCCATCCGAGCCGAGGAATTGATCGGTCAACGATGGCACGGCGGCGAGGTGCCCACCGGGCATTCGATGGACGGCATCC TGACGGTGTCGGGCTGGTACGGCAAGCAGTTCGACGATGTGGACCACGTGCATCCGTTGCTCTTCAGCGATGGCGGGGGC GATATTTTCGCGGTCGATCCGATGCTGGCGCCGATGGGACTGGCGGGCCGGATCAGCGGACTGACCGAGTCCCCGATGGT CAAGCGGACGTCGCCGACTGCACTATCCGCACTCAAGCCACTGATCAGAACCACCAAACACCGCGCCCGGCTGCGCAATA TCGAATTCCGCGGAGCCGTCAGCGCGGCCATGGTCTACGACCACAAGGCGATCATCGACCACTTCCGCAAGGTCGATGAC GCGACATTGCTGGGCATCATGGACCTGCGTGATATGGACCAGCCGTACTTCTTCACGTTGCGCCGGGACTGA
Upstream 100 bases:
>100_bases GCGGTTCCGGACAAGGTGGCGTCAATGGAGAAATACGGGTCAGTCATTTGGGAGTTATTTTGCCTGGGCGCGTCGGGGCC GTGGGTCGTAGGCTCAGGTC
Downstream 100 bases:
>100_bases GGCGTGTTGACGACCATCTAGGCGGCCCGGGTGAGGGCGCCGAAATGATCTTGCTCGAGCGATCTTTCACACATTCCCCG CGGCAGATGTGGCATGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MTSTSDLFALEHGTTTQEALTFFDNLEPIRAEELIGQRWHGGEVPTGHSMDGILTVSGWYGKQFDDVDHVHPLLFSDGGG DIFAVDPMLAPMGLAGRISGLTESPMVKRTSPTALSALKPLIRTTKHRARLRNIEFRGAVSAAMVYDHKAIIDHFRKVDD ATLLGIMDLRDMDQPYFFTLRRD
Sequences:
>Translated_183_residues MTSTSDLFALEHGTTTQEALTFFDNLEPIRAEELIGQRWHGGEVPTGHSMDGILTVSGWYGKQFDDVDHVHPLLFSDGGG DIFAVDPMLAPMGLAGRISGLTESPMVKRTSPTALSALKPLIRTTKHRARLRNIEFRGAVSAAMVYDHKAIIDHFRKVDD ATLLGIMDLRDMDQPYFFTLRRD >Mature_182_residues TSTSDLFALEHGTTTQEALTFFDNLEPIRAEELIGQRWHGGEVPTGHSMDGILTVSGWYGKQFDDVDHVHPLLFSDGGGD IFAVDPMLAPMGLAGRISGLTESPMVKRTSPTALSALKPLIRTTKHRARLRNIEFRGAVSAAMVYDHKAIIDHFRKVDDA TLLGIMDLRDMDQPYFFTLRRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20371; Mature: 20240
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTSDLFALEHGTTTQEALTFFDNLEPIRAEELIGQRWHGGEVPTGHSMDGILTVSGWY CCCCCCEEEEECCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEECCC GKQFDDVDHVHPLLFSDGGGDIFAVDPMLAPMGLAGRISGLTESPMVKRTSPTALSALKP CCCCCCCCHHCCEEEECCCCCEEEECCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHH LIRTTKHRARLRNIEFRGAVSAAMVYDHKAIIDHFRKVDDATLLGIMDLRDMDQPYFFTL HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCCCCEEEEE RRD ECC >Mature Secondary Structure TSTSDLFALEHGTTTQEALTFFDNLEPIRAEELIGQRWHGGEVPTGHSMDGILTVSGWY CCCCCEEEEECCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEECCC GKQFDDVDHVHPLLFSDGGGDIFAVDPMLAPMGLAGRISGLTESPMVKRTSPTALSALKP CCCCCCCCHHCCEEEECCCCCEEEECCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHH LIRTTKHRARLRNIEFRGAVSAAMVYDHKAIIDHFRKVDDATLLGIMDLRDMDQPYFFTL HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCCCCEEEEE RRD ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA