| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627304
Identifier: 169627304
GI number: 169627304
Start: 208913
End: 210406
Strand: Direct
Name: 169627304
Synonym: MAB_0199
Alternate gene names: NA
Gene position: 208913-210406 (Clockwise)
Preceding gene: 169627303
Following gene: 169627311
Centisome position: 4.12
GC content: 67.8
Gene sequence:
>1494_bases ATGGGTTTGTTGCCGTCACGGAATTCTTTGAAGGGTCTGCGCCAGATAGGTGACGGGCTGGGCACGCTAGATCGGGAAGT CTTCGAAGCCGTCGCGGAGTCACCGAGCCCGTTGCTTGACGCCGTCATGCCGCGCCTCACCCGCGCCGCCGACCACTCCA AGCTGTGGATCGGAATCGGCGTCGGGCTGGCACTGTTCGGCAAGCCTGCCGCTGCCCGTGGTGCCACCCGTGGGCTGCTC ACGTTGGCGGTGACCAGCGCCGTCACCAACCAGGTGGCCAAGCGGCTACGGCGGCGCGAGCGGCCGAACCACCTCTCGGT GCCGCTGACGCGGCGCAGCCGGCGGGTGCCGACGTCGTCGTCATTGCCCTCAGGGCATTCGGCGAGTGCCGCGGCGTTCG CGGTGGGAGTCGGCCTGGAAAGCCCGCCGCTGGGCTTTGGGCTCTCGCTGCTCGCCGGTTTGGTGGGGCTGTCCCGGGTG GCGACCGGCGTCCACTACCCCGGCGACGTCTTCGCGGGATTTGGGATCGGTGCGGGACTGGCAGTCCTGGGCGCGCGCGT GGTGCCGCCGATCGTGACGACGTCTGTTCCGACGGGCGAGCCGCTGCGGGTGGAAACACCCGCACGGCCCGGGGGCGAGG GTGTCGTATTGGTGGTCAATCCGGCGTCCGGCGATGGCACCGGGCAGCGGATCCTGGAACAGGTGCGCAAAGCGCTGCCG CGCACCGAAATTGTCGAGCTGAGCAAGGACGATGACGTCATCGAAGTGATGCGTGCGGCCGCGGGCCGGGCGGAGGTGCT CGCGGTGGGAGGCGGCGACGGCACGGTGGCATGCGCTGCCGGTGTGGCGGTCGAGACCGACAGGCCGCTGGCGGTTTTCC CCGGCGGCACCTTCAATCACTTCGCCAAGGACATCGGCTGCGAGAGCGTGGCCAAGACCGTCGACGCGATCCGACGGGGC AGTGTCAGCCGAGTCGACCTGGTCTACCTGAACGAGCGCCAGGTGGTGATCAATACGGCGAGCATCGGTTCCTACCCCAA GTTCGTGCAGGTCCGCGAGAAGCTCGAGCGCCGCATAGGCAAACCGCTGGCCGCCGTGTACGCGATGCTGTACGTGTTGC GGCGCGATCACCCGGTGCGTATCCGGTTCGACAACAAGACGATTCAGACCTCACTGTTCTTTCTGGGTAATTCGGTCTAT CTCCCGGCGGGTTTCGCGCCGTCCCTGCGCAGCCGGCTGGACGATGGCCTGATCGATGTGCGGATCCTGGAAACCGGTCG CCGGTTCAGCGGTGTGCGGATCCTGACTGCGCTGGCACTGGGACGCTTGCAACGCAGCCCGCTCTACCACGAGCTGCAGG TGCCCGAATTCACGTTCACCGCGGTGGATGGCCCTACCGTGCTCGCCCGCGATGGGGAAGCGGGCGACAGGTACACCGAG GCGCACTTCACGGTGCGTTACCGGGCGCTGGCGGTGTTCCGTCCGCTGCCGTGA
Upstream 100 bases:
>100_bases GGATCACGTGCACGTGTCCTTCCGGGCCGATGCCAAGCCCCCTGCCGTCAACTGCTGACAGACCACCCAGCCGTGCGGTG TGCGGGATATGTTGGGCTGC
Downstream 100 bases:
>100_bases CGGTCCACGGCGGCAGCGCCAACAGACACACGATGAAGTACGCGTAGCCCAGCGCCCACCCCGCCAGCACATCGGAGGGG TTGTGCACGTTGAGTAGGAC
Product: phosphoesterase, PA-phosphatase related protein
Products: NA
Alternate protein names: Lipid Kinase; Diacylglycerol Kinase; Phosphoesterase PA-Phosphatase ; Phosphoesterase PA-Phosphatase Related Protein; Glycerophosphatase; Diacylglycerol Kinase Family Protein; PAP2 Superfamily Protein; Lipid Kinase YegS-Like Protein; Sphingosine/Diacylglycerol Kinase-Like; Diacylglycerol Kinase Catalytic Domain-Containing Protein; Sphingosine Kinase And Related Diacylglycerol Kinase; PA-Phosphatase-Like Phosphoesterase; Diacylglycerol Kinase Catalytic Subunit; Sphingosine Kinase; Related Diacylglycerol Kinase; Sphingosine Kinase-Like Protein; PAP2 Superfamily Domain Protein; PAP2 Superfamily Domain-Containing Protein; Sphingosine Kinase/Eukaryotic Diacylglycerol Kinase; LOW QUALITY PROTEIN Diacylglycerol Kinase; Diacylglycerol Kinase Catalytic Domain Protein
Number of amino acids: Translated: 497; Mature: 496
Protein sequence:
>497_residues MGLLPSRNSLKGLRQIGDGLGTLDREVFEAVAESPSPLLDAVMPRLTRAADHSKLWIGIGVGLALFGKPAAARGATRGLL TLAVTSAVTNQVAKRLRRRERPNHLSVPLTRRSRRVPTSSSLPSGHSASAAAFAVGVGLESPPLGFGLSLLAGLVGLSRV ATGVHYPGDVFAGFGIGAGLAVLGARVVPPIVTTSVPTGEPLRVETPARPGGEGVVLVVNPASGDGTGQRILEQVRKALP RTEIVELSKDDDVIEVMRAAAGRAEVLAVGGGDGTVACAAGVAVETDRPLAVFPGGTFNHFAKDIGCESVAKTVDAIRRG SVSRVDLVYLNERQVVINTASIGSYPKFVQVREKLERRIGKPLAAVYAMLYVLRRDHPVRIRFDNKTIQTSLFFLGNSVY LPAGFAPSLRSRLDDGLIDVRILETGRRFSGVRILTALALGRLQRSPLYHELQVPEFTFTAVDGPTVLARDGEAGDRYTE AHFTVRYRALAVFRPLP
Sequences:
>Translated_497_residues MGLLPSRNSLKGLRQIGDGLGTLDREVFEAVAESPSPLLDAVMPRLTRAADHSKLWIGIGVGLALFGKPAAARGATRGLL TLAVTSAVTNQVAKRLRRRERPNHLSVPLTRRSRRVPTSSSLPSGHSASAAAFAVGVGLESPPLGFGLSLLAGLVGLSRV ATGVHYPGDVFAGFGIGAGLAVLGARVVPPIVTTSVPTGEPLRVETPARPGGEGVVLVVNPASGDGTGQRILEQVRKALP RTEIVELSKDDDVIEVMRAAAGRAEVLAVGGGDGTVACAAGVAVETDRPLAVFPGGTFNHFAKDIGCESVAKTVDAIRRG SVSRVDLVYLNERQVVINTASIGSYPKFVQVREKLERRIGKPLAAVYAMLYVLRRDHPVRIRFDNKTIQTSLFFLGNSVY LPAGFAPSLRSRLDDGLIDVRILETGRRFSGVRILTALALGRLQRSPLYHELQVPEFTFTAVDGPTVLARDGEAGDRYTE AHFTVRYRALAVFRPLP >Mature_496_residues GLLPSRNSLKGLRQIGDGLGTLDREVFEAVAESPSPLLDAVMPRLTRAADHSKLWIGIGVGLALFGKPAAARGATRGLLT LAVTSAVTNQVAKRLRRRERPNHLSVPLTRRSRRVPTSSSLPSGHSASAAAFAVGVGLESPPLGFGLSLLAGLVGLSRVA TGVHYPGDVFAGFGIGAGLAVLGARVVPPIVTTSVPTGEPLRVETPARPGGEGVVLVVNPASGDGTGQRILEQVRKALPR TEIVELSKDDDVIEVMRAAAGRAEVLAVGGGDGTVACAAGVAVETDRPLAVFPGGTFNHFAKDIGCESVAKTVDAIRRGS VSRVDLVYLNERQVVINTASIGSYPKFVQVREKLERRIGKPLAAVYAMLYVLRRDHPVRIRFDNKTIQTSLFFLGNSVYL PAGFAPSLRSRLDDGLIDVRILETGRRFSGVRILTALALGRLQRSPLYHELQVPEFTFTAVDGPTVLARDGEAGDRYTEA HFTVRYRALAVFRPLP
Specific function: Unknown
COG id: COG1597
COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52868; Mature: 52737
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLPSRNSLKGLRQIGDGLGTLDREVFEAVAESPSPLLDAVMPRLTRAADHSKLWIGIG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEC VGLALFGKPAAARGATRGLLTLAVTSAVTNQVAKRLRRRERPNHLSVPLTRRSRRVPTSS CHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCC SLPSGHSASAAAFAVGVGLESPPLGFGLSLLAGLVGLSRVATGVHYPGDVFAGFGIGAGL CCCCCCCCCHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHECCCHHHHH AVLGARVVPPIVTTSVPTGEPLRVETPARPGGEGVVLVVNPASGDGTGQRILEQVRKALP HHHHHHHCCCCEECCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCC RTEIVELSKDDDVIEVMRAAAGRAEVLAVGGGDGTVACAAGVAVETDRPLAVFPGGTFNH CCEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCCEEEECCEEEECCCCEEEECCCCHHH FAKDIGCESVAKTVDAIRRGSVSRVDLVYLNERQVVINTASIGSYPKFVQVREKLERRIG HHHHHCHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHC KPLAAVYAMLYVLRRDHPVRIRFDNKTIQTSLFFLGNSVYLPAGFAPSLRSRLDDGLIDV CHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEEECCEEEECCCCCHHHHHHCCCCCEEE RILETGRRFSGVRILTALALGRLQRSPLYHELQVPEFTFTAVDGPTVLARDGEAGDRYTE EEECCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCCEEEEECCCCCCCEEH AHFTVRYRALAVFRPLP EEEEEEEEEEEEECCCC >Mature Secondary Structure GLLPSRNSLKGLRQIGDGLGTLDREVFEAVAESPSPLLDAVMPRLTRAADHSKLWIGIG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEC VGLALFGKPAAARGATRGLLTLAVTSAVTNQVAKRLRRRERPNHLSVPLTRRSRRVPTSS CHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCC SLPSGHSASAAAFAVGVGLESPPLGFGLSLLAGLVGLSRVATGVHYPGDVFAGFGIGAGL CCCCCCCCCHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHECCCHHHHH AVLGARVVPPIVTTSVPTGEPLRVETPARPGGEGVVLVVNPASGDGTGQRILEQVRKALP HHHHHHHCCCCEECCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCC RTEIVELSKDDDVIEVMRAAAGRAEVLAVGGGDGTVACAAGVAVETDRPLAVFPGGTFNH CCEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCCEEEECCEEEECCCCEEEECCCCHHH FAKDIGCESVAKTVDAIRRGSVSRVDLVYLNERQVVINTASIGSYPKFVQVREKLERRIG HHHHHCHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHC KPLAAVYAMLYVLRRDHPVRIRFDNKTIQTSLFFLGNSVYLPAGFAPSLRSRLDDGLIDV CHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEEECCEEEECCCCCHHHHHHCCCCCEEE RILETGRRFSGVRILTALALGRLQRSPLYHELQVPEFTFTAVDGPTVLARDGEAGDRYTE EEECCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCCEEEEECCCCCCCEEH AHFTVRYRALAVFRPLP EEEEEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA