| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is dhmA2 [H]
Identifier: 169627300
GI number: 169627300
Start: 205340
End: 206164
Strand: Reverse
Name: dhmA2 [H]
Synonym: MAB_0195c
Alternate gene names: 169627300
Gene position: 206164-205340 (Counterclockwise)
Preceding gene: 169627301
Following gene: 169627298
Centisome position: 4.07
GC content: 64.97
Gene sequence:
>825_bases ATGCCAACCTTCGAATCCGCCGCCGGCCCCATCCAGTACCGCGATAGCGGAGACGGCCCGCCAATCGTCTTTGTGCACGG GCTTTTCGTCACCGGCACCATGTGGCGCAAGATCGTTGAACCCTTGAGCGGCCGCTTCCGCTGCATCGCACCGGATCTTC CGCTCGGCGCGCACAAGACCCCGATGAACCCGGGCGTAGAGCTCGGTCCCCGCGCGGTGGCCGGTTTGGTCCGTGACTTG ATCGTGAACCTGGATCTCGACGACGTCACCGTGGTCGCCACCGACACCGGCGGCGCCATCACTCAGCTTCTCCTGGCAGA CGGCTGCGACCGGATCGGGCGCGTGGTCCTGACGCCGTGCGATTCTTTCGACAACTTCCTGCCGAAATCGATACGCATCT TTCAGTACTGGGCGCGCGTTCCCGGTACCGACTTCGTGCTGCAGCCGTTCAAACTGCGGCTGGCGCGGCGCGCGCTGGGC AACACCCTTGCCAAACACTCGATTCCGGACGCGGTGCTCGGCGAATGGGTCGCACCGCTCTTGGCACAGCAGGGCATCCG GCGCGATGTCCGGGCATTCCTGCGCGGTATCGACAACCGAGACACGCTGGCCGCCGCCGAGATATTGCGTGGCTTCGAGC GACCGGTGCTGCTGCTGTGGCCACGCACGTTGCCGTTCTTCCCGTTCGCACATGCCGAGCGCTGGCTGCGGCTGCTGCCC AACGCCAAGCTCGTCGAGGTGCCCGACAGCTACACGTTTGTCAGCGAGGACCAACCGGAGCTGATGGTGCGCGAAATAGA GACATTTGTCGGGCAGCGCGTGTAG
Upstream 100 bases:
>100_bases TTTGCCGCGTGCTGGCGGCCACCGGACTCTAACCGCGCGATGGCACCGTCTGGCAGTGCCATGCCTCGTCATGGCAGCAG GTCACGACGATGCTCAAGAC
Downstream 100 bases:
>100_bases ACGTCAGCGGCCGGCGGCCGCCTCGAAGAACCACGACATGACCAGGGCACCGGGATCTTCGACGCCGCGGGCCGCCTCAC CCACGTAGCTGGCCCGGCCG
Product: putative hydrolase, alpha/beta hydrolase fold
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MPTFESAAGPIQYRDSGDGPPIVFVHGLFVTGTMWRKIVEPLSGRFRCIAPDLPLGAHKTPMNPGVELGPRAVAGLVRDL IVNLDLDDVTVVATDTGGAITQLLLADGCDRIGRVVLTPCDSFDNFLPKSIRIFQYWARVPGTDFVLQPFKLRLARRALG NTLAKHSIPDAVLGEWVAPLLAQQGIRRDVRAFLRGIDNRDTLAAAEILRGFERPVLLLWPRTLPFFPFAHAERWLRLLP NAKLVEVPDSYTFVSEDQPELMVREIETFVGQRV
Sequences:
>Translated_274_residues MPTFESAAGPIQYRDSGDGPPIVFVHGLFVTGTMWRKIVEPLSGRFRCIAPDLPLGAHKTPMNPGVELGPRAVAGLVRDL IVNLDLDDVTVVATDTGGAITQLLLADGCDRIGRVVLTPCDSFDNFLPKSIRIFQYWARVPGTDFVLQPFKLRLARRALG NTLAKHSIPDAVLGEWVAPLLAQQGIRRDVRAFLRGIDNRDTLAAAEILRGFERPVLLLWPRTLPFFPFAHAERWLRLLP NAKLVEVPDSYTFVSEDQPELMVREIETFVGQRV >Mature_273_residues PTFESAAGPIQYRDSGDGPPIVFVHGLFVTGTMWRKIVEPLSGRFRCIAPDLPLGAHKTPMNPGVELGPRAVAGLVRDLI VNLDLDDVTVVATDTGGAITQLLLADGCDRIGRVVLTPCDSFDNFLPKSIRIFQYWARVPGTDFVLQPFKLRLARRALGN TLAKHSIPDAVLGEWVAPLLAQQGIRRDVRAFLRGIDNRDTLAAAEILRGFERPVLLLWPRTLPFFPFAHAERWLRLLPN AKLVEVPDSYTFVSEDQPELMVREIETFVGQRV
Specific function: Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons [H]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the haloalkane dehalogenase family. Type 1 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.8.1.5 [H]
Molecular weight: Translated: 30486; Mature: 30355
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTFESAAGPIQYRDSGDGPPIVFVHGLFVTGTMWRKIVEPLSGRFRCIAPDLPLGAHKT CCCCCCCCCCEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC PMNPGVELGPRAVAGLVRDLIVNLDLDDVTVVATDTGGAITQLLLADGCDRIGRVVLTPC CCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCHHHHCCEEECCC DSFDNFLPKSIRIFQYWARVPGTDFVLQPFKLRLARRALGNTLAKHSIPDAVLGEWVAPL CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LAQQGIRRDVRAFLRGIDNRDTLAAAEILRGFERPVLLLWPRTLPFFPFAHAERWLRLLP HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCC NAKLVEVPDSYTFVSEDQPELMVREIETFVGQRV CCEEEECCCCEEECCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure PTFESAAGPIQYRDSGDGPPIVFVHGLFVTGTMWRKIVEPLSGRFRCIAPDLPLGAHKT CCCCCCCCCEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC PMNPGVELGPRAVAGLVRDLIVNLDLDDVTVVATDTGGAITQLLLADGCDRIGRVVLTPC CCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCHHHHCCEEECCC DSFDNFLPKSIRIFQYWARVPGTDFVLQPFKLRLARRALGNTLAKHSIPDAVLGEWVAPL CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LAQQGIRRDVRAFLRGIDNRDTLAAAEILRGFERPVLLLWPRTLPFFPFAHAERWLRLLP HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCC NAKLVEVPDSYTFVSEDQPELMVREIETFVGQRV CCEEEECCCCEEECCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]