| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627261
Identifier: 169627261
GI number: 169627261
Start: 151934
End: 153487
Strand: Reverse
Name: 169627261
Synonym: MAB_0156c
Alternate gene names: NA
Gene position: 153487-151934 (Counterclockwise)
Preceding gene: 169627263
Following gene: 169627256
Centisome position: 3.03
GC content: 62.23
Gene sequence:
>1554_bases ATGCGAGTCACCAGTGTCGGCCATGCCGGATTCTTCATCGAGACGGCGGCGGGGAGCATCCTCTGCGACCCCTGGGTCAA CCCCGCGTACTTCGCCTCGTGGTTCCCGTTCCCCGATAACAGCACCCTGGACTGGGACCGGTTCGGAAGCTGCGACTACC TCTACGTCTCGCATCTCCACAAGGACCACTACGACCCGAAGAACCTGACCGACCACGTCAACAAGGACGCGGTGGTGCTA CTGCCGGACTATCCGGTGCCCGATCTGCGACGGGAGCTGGAGGGACTGGGATTTCACACCTTCGTGGAGACCGAAGACTC GGTGAAGCATCGGGTGAGTGGCCCCAAGGGCGACCTGGACATCATGATCATCGCGCTGCGGGCCCCGGCCGATGGGCCCA TCGGCGACTCCGGGCTTGTGGTGTCCGACGGCACCACGACGGCTTTCAACATGAACGATGCCCGTCCGGTCGATCTGGAT GTACTGGCCGAAGAGTTCGGGCATATCGACGTGCACATGCTGCAGTACTCGGGGGCCATCTGGTACCCGATGGTCTACGA CATGCCCGCCCGTGCCAAGGAGGCCTTTGGCACCCAGAAACGCCAGCGCCAAATGGACCGGTGCCGCCAGTACATCGCCC AGGTCGGCGCCACCTGGGTCATCCCGTCAGCGGGACCGCCGTGCTTCCTCGACACCGGGCTCCGGGACCTCAACGATGAT CACGACGATCCGGCGAACATCTTTCCGGATCAGCTGGTATTCCTGGATCAGATGCGCCAGCACGGCCACGACAAGGGTCT GCTGATGATTCCCGGCACGGTTGCCGATTTCACTGCCTCCGAGTTGAATTCACTGGAACACCCGGTTTCGACCGAGGAAG CAGAGGACATCTTCGGGGCGGGTAAGGCCGCGTATATCGAGGCGTATGCGCAACGGATGGCTCCCGTACTGGCCGCGGAG AAGTCCTCCTGGGCACCCGCCGAAGGCGAGCCGCTACTGGCTCCGCTACGCGCGAAGTTCGAGCCGATCATGGCGCAAAC CGACCAGATCTGCGATGGCATCGGCTACCCGGTGGAACTGCGCCTCGGCAGCGAGACGGTGGTCCTGGATTTCCCGAAAC GTATTGTTCGCGAGCCAATTCCCAACGAGAAGTATCGCTATGGCTTCGAGATCGCGCCCGAGCTGGTGCGTACGGTGCTG CGCGACGACGAACCAGACTGGGTGAACACCATCTTCTTGTCCACCCGGTTCAAGGCGTGGCGCGTGGGTGGCTACAACGA ATACCTGTACACGTTCTTCAAATGCCTCACCGATGAGCGCATCGCCTACGCCGACGGCTGGTTCGCCGAGGCCCACGACG ACAGCGCTTCGATCACGCTGGATGGTTGGGAGATCCAGCGCCGCTGCCCGCACCTGAAGGCCGATCTATCCAAATTCGGT GTGGTGGAGGGGAAAAATCTCACCTGCAATCTGCACGGTTGGGAGTGGAACCTGGAGAATGGGCGCTGTCTGACCTCCAA GGGCCATGAGCTGCGGTCCAGAAAGCTGGGCTAG
Upstream 100 bases:
>100_bases CATCTGGTCCTCGTCCAGGGGATTTCGGCACACAAACAGCGGACCTACGCGCCCGTCCGCGCTTTGGCTACCGAAATCGC AGCTCGATAGGCTGGGAGCC
Downstream 100 bases:
>100_bases CACGGCACCAGTTCGAACATCGGGATCACCCTGGTGATACGCGATTGGTAGTCGCCGAAGAATGCGTACTTGGCCGCGAG TGCCTGGAACATCCTGTGGC
Product: Rieske family iron-sulfur cluster-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 517; Mature: 517
Protein sequence:
>517_residues MRVTSVGHAGFFIETAAGSILCDPWVNPAYFASWFPFPDNSTLDWDRFGSCDYLYVSHLHKDHYDPKNLTDHVNKDAVVL LPDYPVPDLRRELEGLGFHTFVETEDSVKHRVSGPKGDLDIMIIALRAPADGPIGDSGLVVSDGTTTAFNMNDARPVDLD VLAEEFGHIDVHMLQYSGAIWYPMVYDMPARAKEAFGTQKRQRQMDRCRQYIAQVGATWVIPSAGPPCFLDTGLRDLNDD HDDPANIFPDQLVFLDQMRQHGHDKGLLMIPGTVADFTASELNSLEHPVSTEEAEDIFGAGKAAYIEAYAQRMAPVLAAE KSSWAPAEGEPLLAPLRAKFEPIMAQTDQICDGIGYPVELRLGSETVVLDFPKRIVREPIPNEKYRYGFEIAPELVRTVL RDDEPDWVNTIFLSTRFKAWRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSASITLDGWEIQRRCPHLKADLSKFG VVEGKNLTCNLHGWEWNLENGRCLTSKGHELRSRKLG
Sequences:
>Translated_517_residues MRVTSVGHAGFFIETAAGSILCDPWVNPAYFASWFPFPDNSTLDWDRFGSCDYLYVSHLHKDHYDPKNLTDHVNKDAVVL LPDYPVPDLRRELEGLGFHTFVETEDSVKHRVSGPKGDLDIMIIALRAPADGPIGDSGLVVSDGTTTAFNMNDARPVDLD VLAEEFGHIDVHMLQYSGAIWYPMVYDMPARAKEAFGTQKRQRQMDRCRQYIAQVGATWVIPSAGPPCFLDTGLRDLNDD HDDPANIFPDQLVFLDQMRQHGHDKGLLMIPGTVADFTASELNSLEHPVSTEEAEDIFGAGKAAYIEAYAQRMAPVLAAE KSSWAPAEGEPLLAPLRAKFEPIMAQTDQICDGIGYPVELRLGSETVVLDFPKRIVREPIPNEKYRYGFEIAPELVRTVL RDDEPDWVNTIFLSTRFKAWRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSASITLDGWEIQRRCPHLKADLSKFG VVEGKNLTCNLHGWEWNLENGRCLTSKGHELRSRKLG >Mature_517_residues MRVTSVGHAGFFIETAAGSILCDPWVNPAYFASWFPFPDNSTLDWDRFGSCDYLYVSHLHKDHYDPKNLTDHVNKDAVVL LPDYPVPDLRRELEGLGFHTFVETEDSVKHRVSGPKGDLDIMIIALRAPADGPIGDSGLVVSDGTTTAFNMNDARPVDLD VLAEEFGHIDVHMLQYSGAIWYPMVYDMPARAKEAFGTQKRQRQMDRCRQYIAQVGATWVIPSAGPPCFLDTGLRDLNDD HDDPANIFPDQLVFLDQMRQHGHDKGLLMIPGTVADFTASELNSLEHPVSTEEAEDIFGAGKAAYIEAYAQRMAPVLAAE KSSWAPAEGEPLLAPLRAKFEPIMAQTDQICDGIGYPVELRLGSETVVLDFPKRIVREPIPNEKYRYGFEIAPELVRTVL RDDEPDWVNTIFLSTRFKAWRVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSASITLDGWEIQRRCPHLKADLSKFG VVEGKNLTCNLHGWEWNLENGRCLTSKGHELRSRKLG
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017941 [H]
Pfam domain/function: PF00355 Rieske [H]
EC number: NA
Molecular weight: Translated: 58178; Mature: 58178
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVTSVGHAGFFIETAAGSILCDPWVNPAYFASWFPFPDNSTLDWDRFGSCDYLYVSHLH CCEECCCCCCEEEEECCCCEEECCCCCHHHHHEECCCCCCCCCCHHHCCCCCCHHHHHHH KDHYDPKNLTDHVNKDAVVLLPDYPVPDLRRELEGLGFHTFVETEDSVKHRVSGPKGDLD HCCCCCCCHHHHCCCCEEEEECCCCCHHHHHHHHHCCEEEEECCCHHHHHHCCCCCCCEE IMIIALRAPADGPIGDSGLVVSDGTTTAFNMNDARPVDLDVLAEEFGHIDVHMLQYSGAI EEEEEEECCCCCCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHCCCEEEEEEECCEE WYPMVYDMPARAKEAFGTQKRQRQMDRCRQYIAQVGATWVIPSAGPPCFLDTGLRDLNDD EECEEECCCHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEECCCCHHCCCC HDDPANIFPDQLVFLDQMRQHGHDKGLLMIPGTVADFTASELNSLEHPVSTEEAEDIFGA CCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHCC GKAAYIEAYAQRMAPVLAAEKSSWAPAEGEPLLAPLRAKFEPIMAQTDQICDGIGYPVEL CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEE RLGSETVVLDFPKRIVREPIPNEKYRYGFEIAPELVRTVLRDDEPDWVNTIFLSTRFKAW EECCCEEEEECCHHHHHCCCCCCCEEECCHHHHHHHHHHHCCCCCCHHEEEEEEECCEEE RVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSASITLDGWEIQRRCPHLKADLSKFG EECCCHHHHHHHHHHHCCCCEEECCCCEEECCCCCCEEEEECHHHHHHCCCHHHHHHHCC VVEGKNLTCNLHGWEWNLENGRCLTSKGHELRSRKLG CEECCCEEEEEECEEEECCCCEEECCCCHHHHHCCCC >Mature Secondary Structure MRVTSVGHAGFFIETAAGSILCDPWVNPAYFASWFPFPDNSTLDWDRFGSCDYLYVSHLH CCEECCCCCCEEEEECCCCEEECCCCCHHHHHEECCCCCCCCCCHHHCCCCCCHHHHHHH KDHYDPKNLTDHVNKDAVVLLPDYPVPDLRRELEGLGFHTFVETEDSVKHRVSGPKGDLD HCCCCCCCHHHHCCCCEEEEECCCCCHHHHHHHHHCCEEEEECCCHHHHHHCCCCCCCEE IMIIALRAPADGPIGDSGLVVSDGTTTAFNMNDARPVDLDVLAEEFGHIDVHMLQYSGAI EEEEEEECCCCCCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHCCCEEEEEEECCEE WYPMVYDMPARAKEAFGTQKRQRQMDRCRQYIAQVGATWVIPSAGPPCFLDTGLRDLNDD EECEEECCCHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEECCCCHHCCCC HDDPANIFPDQLVFLDQMRQHGHDKGLLMIPGTVADFTASELNSLEHPVSTEEAEDIFGA CCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHCC GKAAYIEAYAQRMAPVLAAEKSSWAPAEGEPLLAPLRAKFEPIMAQTDQICDGIGYPVEL CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEE RLGSETVVLDFPKRIVREPIPNEKYRYGFEIAPELVRTVLRDDEPDWVNTIFLSTRFKAW EECCCEEEEECCHHHHHCCCCCCCEEECCHHHHHHHHHHHCCCCCCHHEEEEEEECCEEE RVGGYNEYLYTFFKCLTDERIAYADGWFAEAHDDSASITLDGWEIQRRCPHLKADLSKFG EECCCHHHHHHHHHHHCCCCEEECCCCEEECCCCCCEEEEECHHHHHHCCCHHHHHHHCC VVEGKNLTCNLHGWEWNLENGRCLTSKGHELRSRKLG CEECCCEEEEEECEEEECCCCEEECCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA