| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627256
Identifier: 169627256
GI number: 169627256
Start: 147109
End: 148782
Strand: Reverse
Name: 169627256
Synonym: MAB_0151c
Alternate gene names: NA
Gene position: 148782-147109 (Counterclockwise)
Preceding gene: 169627261
Following gene: 169627255
Centisome position: 2.94
GC content: 66.97
Gene sequence:
>1674_bases ATGAGTGACGAAGCCGAACCCACGCCAAAGGTCGAGCGGGACGACTCCACCCCGGATGAGCCCACCAACGACGAGCTGGG CACCGACGCATCCGCAGACTCCCCCGTCGAGTCTCCGGACTCCGCCACGCCGCCCGCAGAGGCTCCGGGCAGCGCGTCCT CCGCAGAGGGCGCCACCGAATCCGTCGACACCGAGCAGGCGCCTGCGACGGAAATCCTGGAATACCCCGACACCGATGAT TCCGCCGTGCCTGTGGCCGAGGAACCGCAGCAAGGCGCCCAGGAATCCGCCAAACCTCAGTGGTGGGCGGGCCTGAAGGA AGGGCTCAAAGAGCGTTCCACGCACCGCGCGCTGCTCCTGGTCACCTTTGGTGGCCTCTTCATCGCGGGTGTCACCCAAG CCCTGCCGGACGGCTGGACCTCAGCCGACCGCCTGGTCAACAAGATCGACTCCAACCCGGTACCCAGCACGGGCGCACCG GGTAACAGCACCTTCAACTCTGCGAAGGCGGGGGAATGCCTCAACTGGCCCGCCCCCGCGTCCACCAACGACGTCAACAT CGTCGACTGCGCCAACGACCACCGTTTCGAAATCGCCGAGTCCATCGACCTGCGTACCTTCCCGGGTACGGAGTACGGGC CCAATTCCAAGCCCCCCACCGTCGGCCGTATCCAGGAGATCAGCCAGGAACAGTGCCAGGTGGCCATCAACCGTTACCTG GGCGATCGGTACGACCCGAACAGCCGATTCACCATGGGCATGCTGTGGCCCGGTGAGAAGGGGTGGACCGAGGCCGGAGA ACGCCGGGTGCTGTGTGGGCTGCAACTACCCGGCGCCGACAATCAGCAACAGCTGTTCCGGGGCAAGGTCGCCGAGCAAG ATCAGTCCAAGGTCTGGCCCGCCGGCACCTGCTTGGGCATCGATTCGACCACCAATCTGCCCACCGAGCTCCCGGTGGAT TGCGACAAGGCTCATGCCATGGAGATCACCGGAACGGTGAGCCTGGCAGAGCAGTTCCCTGGATCGGTTCCTCCCGAGCC CGATCAGGACGCGTTCATCAAGGACAACTGCACCCGGTTGACCAATGACTACATGGGCAATCCCGACGGATTCCGCGCGA CCACGCTGACACTGTCCTACAACACGATCACCTTGCCGAGCTGGACCGCGGGCAGCCGTCAGGTCAGCTGCAACATCGGC TCCACACTGGGTAACGGCGCGTGGTCAACGCTGGTCAATAGCGCCAAGAGTGGCCAACTGCTGATCAACGGCCAGCCGCC GGTGCCACCGCCGGACATCCCGGCCGATCGGCTGAACATGCCGCCCATCCCGCTGTCGACCACACCGGCGCCCACCCAGC AGCCGACCCAGACTCAGCAACCCACCTATACGCAGCAACCCACGTACACACAGCAGCCCACGCGTACCCAGCAACCAACG CAGCAGACGACCCAGCAGCCGACCCGGACGTCCACCGCGCCAACCTCGTCGGGCGCGCCCAGTCCCCCCAACCAGCCGGG TATCACCATCGTGACGACGCTGCCGCCGGGGGCGGGCCCGCCTCCGGCTCCGGCCGGTCCGCCCATGGACGGTCCGCCCA TGGAAGGCCCCCCGATGGAGGGGCCGCCGCCCGGACAGGCACCCGCGGGGGCACCTCCGCCCGGACCGGCCTGA
Upstream 100 bases:
>100_bases ACGGTCAGGTTCCATCGTTGTCACAGTGTTCAATCTAGCGGCGTACGCAGACCGCATCGCCCGGCTAACCCGCGGCACCA CCTGTAACAATGACTGCAGT
Downstream 100 bases:
>100_bases CGGTGTCCCTCTACGGCACCATGTCCCTTTACGGCGCCATCTCCTGATGCCCGTGCAGATGGGCGAGCAACGGTTCGAAG AGCTCGTGTCCGATGCTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 557; Mature: 556
Protein sequence:
>557_residues MSDEAEPTPKVERDDSTPDEPTNDELGTDASADSPVESPDSATPPAEAPGSASSAEGATESVDTEQAPATEILEYPDTDD SAVPVAEEPQQGAQESAKPQWWAGLKEGLKERSTHRALLLVTFGGLFIAGVTQALPDGWTSADRLVNKIDSNPVPSTGAP GNSTFNSAKAGECLNWPAPASTNDVNIVDCANDHRFEIAESIDLRTFPGTEYGPNSKPPTVGRIQEISQEQCQVAINRYL GDRYDPNSRFTMGMLWPGEKGWTEAGERRVLCGLQLPGADNQQQLFRGKVAEQDQSKVWPAGTCLGIDSTTNLPTELPVD CDKAHAMEITGTVSLAEQFPGSVPPEPDQDAFIKDNCTRLTNDYMGNPDGFRATTLTLSYNTITLPSWTAGSRQVSCNIG STLGNGAWSTLVNSAKSGQLLINGQPPVPPPDIPADRLNMPPIPLSTTPAPTQQPTQTQQPTYTQQPTYTQQPTRTQQPT QQTTQQPTRTSTAPTSSGAPSPPNQPGITIVTTLPPGAGPPPAPAGPPMDGPPMEGPPMEGPPPGQAPAGAPPPGPA
Sequences:
>Translated_557_residues MSDEAEPTPKVERDDSTPDEPTNDELGTDASADSPVESPDSATPPAEAPGSASSAEGATESVDTEQAPATEILEYPDTDD SAVPVAEEPQQGAQESAKPQWWAGLKEGLKERSTHRALLLVTFGGLFIAGVTQALPDGWTSADRLVNKIDSNPVPSTGAP GNSTFNSAKAGECLNWPAPASTNDVNIVDCANDHRFEIAESIDLRTFPGTEYGPNSKPPTVGRIQEISQEQCQVAINRYL GDRYDPNSRFTMGMLWPGEKGWTEAGERRVLCGLQLPGADNQQQLFRGKVAEQDQSKVWPAGTCLGIDSTTNLPTELPVD CDKAHAMEITGTVSLAEQFPGSVPPEPDQDAFIKDNCTRLTNDYMGNPDGFRATTLTLSYNTITLPSWTAGSRQVSCNIG STLGNGAWSTLVNSAKSGQLLINGQPPVPPPDIPADRLNMPPIPLSTTPAPTQQPTQTQQPTYTQQPTYTQQPTRTQQPT QQTTQQPTRTSTAPTSSGAPSPPNQPGITIVTTLPPGAGPPPAPAGPPMDGPPMEGPPMEGPPPGQAPAGAPPPGPA >Mature_556_residues SDEAEPTPKVERDDSTPDEPTNDELGTDASADSPVESPDSATPPAEAPGSASSAEGATESVDTEQAPATEILEYPDTDDS AVPVAEEPQQGAQESAKPQWWAGLKEGLKERSTHRALLLVTFGGLFIAGVTQALPDGWTSADRLVNKIDSNPVPSTGAPG NSTFNSAKAGECLNWPAPASTNDVNIVDCANDHRFEIAESIDLRTFPGTEYGPNSKPPTVGRIQEISQEQCQVAINRYLG DRYDPNSRFTMGMLWPGEKGWTEAGERRVLCGLQLPGADNQQQLFRGKVAEQDQSKVWPAGTCLGIDSTTNLPTELPVDC DKAHAMEITGTVSLAEQFPGSVPPEPDQDAFIKDNCTRLTNDYMGNPDGFRATTLTLSYNTITLPSWTAGSRQVSCNIGS TLGNGAWSTLVNSAKSGQLLINGQPPVPPPDIPADRLNMPPIPLSTTPAPTQQPTQTQQPTYTQQPTYTQQPTRTQQPTQ QTTQQPTRTSTAPTSSGAPSPPNQPGITIVTTLPPGAGPPPAPAGPPMDGPPMEGPPMEGPPPGQAPAGAPPPGPA
Specific function: May play a role in septum formation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential). Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58697; Mature: 58566
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDEAEPTPKVERDDSTPDEPTNDELGTDASADSPVESPDSATPPAEAPGSASSAEGATE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SVDTEQAPATEILEYPDTDDSAVPVAEEPQQGAQESAKPQWWAGLKEGLKERSTHRALLL CCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEE VTFGGLFIAGVTQALPDGWTSADRLVNKIDSNPVPSTGAPGNSTFNSAKAGECLNWPAPA EEHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC STNDVNIVDCANDHRFEIAESIDLRTFPGTEYGPNSKPPTVGRIQEISQEQCQVAINRYL CCCCEEEEECCCCCCEEHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH GDRYDPNSRFTMGMLWPGEKGWTEAGERRVLCGLQLPGADNQQQLFRGKVAEQDQSKVWP CCCCCCCCCEEEEEECCCCCCCHHHCCCEEEEEEECCCCCCHHHHHHHHHCCCHHHCCCC AGTCLGIDSTTNLPTELPVDCDKAHAMEITGTVSLAEQFPGSVPPEPDQDAFIKDNCTRL CCEEEECCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCEECCCHHHH TNDYMGNPDGFRATTLTLSYNTITLPSWTAGSRQVSCNIGSTLGNGAWSTLVNSAKSGQL HHHCCCCCCCCEEEEEEEEECEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCEE LINGQPPVPPPDIPADRLNMPPIPLSTTPAPTQQPTQTQQPTYTQQPTYTQQPTRTQQPT EECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH QQTTQQPTRTSTAPTSSGAPSPPNQPGITIVTTLPPGAGPPPAPAGPPMDGPPMEGPPME HHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC GPPPGQAPAGAPPPGPA CCCCCCCCCCCCCCCCC >Mature Secondary Structure SDEAEPTPKVERDDSTPDEPTNDELGTDASADSPVESPDSATPPAEAPGSASSAEGATE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SVDTEQAPATEILEYPDTDDSAVPVAEEPQQGAQESAKPQWWAGLKEGLKERSTHRALLL CCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEE VTFGGLFIAGVTQALPDGWTSADRLVNKIDSNPVPSTGAPGNSTFNSAKAGECLNWPAPA EEHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC STNDVNIVDCANDHRFEIAESIDLRTFPGTEYGPNSKPPTVGRIQEISQEQCQVAINRYL CCCCEEEEECCCCCCEEHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH GDRYDPNSRFTMGMLWPGEKGWTEAGERRVLCGLQLPGADNQQQLFRGKVAEQDQSKVWP CCCCCCCCCEEEEEECCCCCCCHHHCCCEEEEEEECCCCCCHHHHHHHHHCCCHHHCCCC AGTCLGIDSTTNLPTELPVDCDKAHAMEITGTVSLAEQFPGSVPPEPDQDAFIKDNCTRL CCEEEECCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCEECCCHHHH TNDYMGNPDGFRATTLTLSYNTITLPSWTAGSRQVSCNIGSTLGNGAWSTLVNSAKSGQL HHHCCCCCCCCEEEEEEEEECEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCEE LINGQPPVPPPDIPADRLNMPPIPLSTTPAPTQQPTQTQQPTYTQQPTYTQQPTRTQQPT EECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH QQTTQQPTRTSTAPTSSGAPSPPNQPGITIVTTLPPGAGPPPAPAGPPMDGPPMEGPPME HHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC GPPPGQAPAGAPPPGPA CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]