| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627257
Identifier: 169627257
GI number: 169627257
Start: 148859
End: 149305
Strand: Direct
Name: 169627257
Synonym: MAB_0152
Alternate gene names: NA
Gene position: 148859-149305 (Clockwise)
Preceding gene: 169627251
Following gene: 169627258
Centisome position: 2.94
GC content: 67.56
Gene sequence:
>447_bases GTGACAACGATGGAACCTGACCGTGACAACCCGGACGACCAGGCGGGGGAAGCCGAACATCAGGCCCGCGTTGCCGAGCA GGTCGCAGCGCTGGCCCATGAACTGTTCAACATGGCCCGGGAGGGTAACGCGTCCACCCTGGCCGCCTACCTCGACGCGG GCGCACCGGTGGATCTGACGAATGAGGCGGGTGACACGCTCGTCATGCTGGCCGCGTACCACGGAAACGCCTCGACGGTG CGATCGCTGGTAGCGCGCGGAGCCGACGTGAACCGGGCCAATGACAAGGGGCAGACGCCGCTGGCTGGAGCGGTGTTCAA GGGCTCCGACGACATCGTCCAGATCCTGGTCAATGCGGGCGCCGACCCCGCCGCGGGCACGCCGTCTGCGCTCGACGCCG CGCGGATGTTCGGCAAGGACGGGTATCTGAGCCTGTTCGGTGCCTAA
Upstream 100 bases:
>100_bases CGTGGGTTCGGCTTCGTCACTCATACTGCAGTCATTGTTACAGGTGGTGCCGCGGGTTAGCCGGGCGATGCGGTCTGCGT ACGCCGCTAGATTGAACACT
Downstream 100 bases:
>100_bases TGGGTTGGCCGGGGTTTCCGGCTCCCACGTAATGTTCAGCAGGTGATCGACCTCAAATTCCTGCGCGAAAACCCCGATGC GGTGCGTGCCTCACAGCGGC
Product: putative ankyrin-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MTTMEPDRDNPDDQAGEAEHQARVAEQVAALAHELFNMAREGNASTLAAYLDAGAPVDLTNEAGDTLVMLAAYHGNASTV RSLVARGADVNRANDKGQTPLAGAVFKGSDDIVQILVNAGADPAAGTPSALDAARMFGKDGYLSLFGA
Sequences:
>Translated_148_residues MTTMEPDRDNPDDQAGEAEHQARVAEQVAALAHELFNMAREGNASTLAAYLDAGAPVDLTNEAGDTLVMLAAYHGNASTV RSLVARGADVNRANDKGQTPLAGAVFKGSDDIVQILVNAGADPAAGTPSALDAARMFGKDGYLSLFGA >Mature_147_residues TTMEPDRDNPDDQAGEAEHQARVAEQVAALAHELFNMAREGNASTLAAYLDAGAPVDLTNEAGDTLVMLAAYHGNASTVR SLVARGADVNRANDKGQTPLAGAVFKGSDDIVQILVNAGADPAAGTPSALDAARMFGKDGYLSLFGA
Specific function: Unknown
COG id: COG0666
COG function: function code R; FOG: Ankyrin repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 ANK repeats [H]
Homologues:
Organism=Drosophila melanogaster, GI24667933, Length=84, Percent_Identity=41.6666666666667, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002110 - InterPro: IPR020683 [H]
Pfam domain/function: PF00023 Ank [H]
EC number: NA
Molecular weight: Translated: 15244; Mature: 15113
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTMEPDRDNPDDQAGEAEHQARVAEQVAALAHELFNMAREGNASTLAAYLDAGAPVDLT CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCC NEAGDTLVMLAAYHGNASTVRSLVARGADVNRANDKGQTPLAGAVFKGSDDIVQILVNAG CCCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHCC ADPAAGTPSALDAARMFGKDGYLSLFGA CCCCCCCCHHHHHHHHHCCCCCEEECCC >Mature Secondary Structure TTMEPDRDNPDDQAGEAEHQARVAEQVAALAHELFNMAREGNASTLAAYLDAGAPVDLT CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCC NEAGDTLVMLAAYHGNASTVRSLVARGADVNRANDKGQTPLAGAVFKGSDDIVQILVNAG CCCCCEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHCC ADPAAGTPSALDAARMFGKDGYLSLFGA CCCCCCCCHHHHHHHHHCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]