| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is yhiD [H]
Identifier: 169627251
GI number: 169627251
Start: 143651
End: 144400
Strand: Direct
Name: yhiD [H]
Synonym: MAB_0146
Alternate gene names: 169627251
Gene position: 143651-144400 (Clockwise)
Preceding gene: 169627243
Following gene: 169627257
Centisome position: 2.83
GC content: 64.13
Gene sequence:
>750_bases ATGGCACTTGCGGATTCTGTGGCGATGTTCGGTGGTGCGGGCCAGGGCGGTCGGCAACTTGTCGGGCTGCTGGCCGCGTT CGTGCTATCGGGGATTATCGGCCTGGAACGCGAGATCGCGGGTAAGAGTGCGGGATTGCGCACACAGACGATTGTCGGGA CCTCCGCGGCGCTGATCTTATTGGTGAGCAAATACGGTTTTGATGATGTGCTGGCCGACGGCATCGTGATCCTTGACCCG TCACGCGTTGCGGCGCAGATCGTTTCGGGTATCGGTTTTCTGGGCGCCGGAATCATCATCATGCGCCGCGGGGCGGTGCA CGGGTTGACCACGGCGGCGGCGATATGGGAATCGGCGGCGGTGGGCATGGCCGCGGGCGCCGGGCTACTGCTGCTGGCGA TGGTGGTGACTGTCCTGCATTTCGCAACGGTATTCGGATTGGCGGCCTTGGGCCGACTGCTCACCGCGAGGCTGCATGGC GCTGTCAGCCTGCACGTCACCTACGCGGACGGCCGGGGTGTCCTGAGGCAGCTGCTCAACGCCTGCAATGCACACCGCTG GTCTTTGTTGGCATTGTCCGCCGACCCACCGGCCGCGCCTCAGACCACCGACTCGATCAGCCCTGGCACCGCGCGTGAGG TCGGCGTGGTGATGACCTTGTCCGGCACAAGACTTGATGCCGCAACGAATGTGCTTGCGGCGGTGGACGGTGTACATCGC ATCGACCGGCTTGGCGACGATATCGAGTAG
Upstream 100 bases:
>100_bases TATCTCAATGCGTGGTCCAGTGCTGCGTAGCCCCGGTGCAGATGAAGATCGCCCGGGCGCACAAGTTTGGCGCTACCTCG TGGTGGATACCCAAGGGGCT
Downstream 100 bases:
>100_bases CCGGCCGGGTCTATTCCAAACCGAGGCTCTTGAGGGCGTGCGTCATCCGCTGCGGCGTGGCAGGGGTGAGTGTGGCCCAC AGGGCACCGTCGGCGGACGT
Product: putative magnesium transport MgtC family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MALADSVAMFGGAGQGGRQLVGLLAAFVLSGIIGLEREIAGKSAGLRTQTIVGTSAALILLVSKYGFDDVLADGIVILDP SRVAAQIVSGIGFLGAGIIIMRRGAVHGLTTAAAIWESAAVGMAAGAGLLLLAMVVTVLHFATVFGLAALGRLLTARLHG AVSLHVTYADGRGVLRQLLNACNAHRWSLLALSADPPAAPQTTDSISPGTAREVGVVMTLSGTRLDAATNVLAAVDGVHR IDRLGDDIE
Sequences:
>Translated_249_residues MALADSVAMFGGAGQGGRQLVGLLAAFVLSGIIGLEREIAGKSAGLRTQTIVGTSAALILLVSKYGFDDVLADGIVILDP SRVAAQIVSGIGFLGAGIIIMRRGAVHGLTTAAAIWESAAVGMAAGAGLLLLAMVVTVLHFATVFGLAALGRLLTARLHG AVSLHVTYADGRGVLRQLLNACNAHRWSLLALSADPPAAPQTTDSISPGTAREVGVVMTLSGTRLDAATNVLAAVDGVHR IDRLGDDIE >Mature_248_residues ALADSVAMFGGAGQGGRQLVGLLAAFVLSGIIGLEREIAGKSAGLRTQTIVGTSAALILLVSKYGFDDVLADGIVILDPS RVAAQIVSGIGFLGAGIIIMRRGAVHGLTTAAAIWESAAVGMAAGAGLLLLAMVVTVLHFATVFGLAALGRLLTARLHGA VSLHVTYADGRGVLRQLLNACNAHRWSLLALSADPPAAPQTTDSISPGTAREVGVVMTLSGTRLDAATNVLAAVDGVHRI DRLGDDIE
Specific function: Unknown
COG id: COG1285
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MgtC/SapB family [H]
Homologues:
Organism=Escherichia coli, GI1789924, Length=155, Percent_Identity=43.2258064516129, Blast_Score=117, Evalue=6e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003416 [H]
Pfam domain/function: PF02308 MgtC [H]
EC number: NA
Molecular weight: Translated: 25277; Mature: 25146
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALADSVAMFGGAGQGGRQLVGLLAAFVLSGIIGLEREIAGKSAGLRTQTIVGTSAALIL CCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHH LVSKYGFDDVLADGIVILDPSRVAAQIVSGIGFLGAGIIIMRRGAVHGLTTAAAIWESAA HHHHCCCHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHH VGMAAGAGLLLLAMVVTVLHFATVFGLAALGRLLTARLHGAVSLHVTYADGRGVLRQLLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCHHHHHHHHH ACNAHRWSLLALSADPPAAPQTTDSISPGTAREVGVVMTLSGTRLDAATNVLAAVDGVHR HCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHCEEEEEECCCCHHHHHHHHHHHHHHHH IDRLGDDIE HHHCCCCCC >Mature Secondary Structure ALADSVAMFGGAGQGGRQLVGLLAAFVLSGIIGLEREIAGKSAGLRTQTIVGTSAALIL CCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHH LVSKYGFDDVLADGIVILDPSRVAAQIVSGIGFLGAGIIIMRRGAVHGLTTAAAIWESAA HHHHCCCHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHH VGMAAGAGLLLLAMVVTVLHFATVFGLAALGRLLTARLHGAVSLHVTYADGRGVLRQLLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCHHHHHHHHH ACNAHRWSLLALSADPPAAPQTTDSISPGTAREVGVVMTLSGTRLDAATNVLAAVDGVHR HCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHCEEEEEECCCCHHHHHHHHHHHHHHHH IDRLGDDIE HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]