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The map label for this gene is glpQ1 [H]

Identifier: 169627228

GI number: 169627228

Start: 121597

End: 122460

Strand: Direct

Name: glpQ1 [H]

Synonym: MAB_0123

Alternate gene names: 169627228

Gene position: 121597-122460 (Clockwise)

Preceding gene: 169627227

Following gene: 169627229

Centisome position: 2.4

GC content: 66.67

Gene sequence:

>864_bases
GTGACCGAGTCGTCGGAGCCTGGTGAGGATGAGGCCCATGCACGGGGAGCCGACGGTATAGACGGCAGGGGCGAACGCCA
TCCGTTCGTCGTCGCGCATCGGGGCGCGTCGGCGGACCGGCCCGAGCACACTCTTGCGGCGTATGAGCTTGCCCTCGAAG
AGGGGGCCGACGGAGTCGAGTGCGATGTGCGCCTCACCCGGGACGGACAGCTGGTGTGTGTGCATGACCGCAGAGTCGAC
CGCACCTCGGACGGGACCGGGTTGGTCAGTGAGATGACACTGAGCCAGCTGCGCGCATTGGATTTCGGCAGCTGGCATCC
GGGGGGTGCCGAGGCAGAGACGGGCACGGGGCTGCTGACTCTCGAGGAACTGGTTTCCCTGGTACTCGACTGGAACCGCC
CGGTGAAGTTGTTCATCGAAACCAAGCACCCGGTCCGGTACGGGTCGTTGGTCGAGAACAAGGTGCTCGCGCTGCTCCAC
CGGTTCGGCATTGCGGCACCGGCATCGGCCGATATGTCACGGGCGGTGGTCATGTCGTTCTCGGCCGCCGCGGTATGGCG
CATCCGGCGTGCGGCTCCGATGCTGCCCACCGTGCTCCTCGGCGAGACCTCCAGGTATCTCGGCGGCAGCGCGGCTACCA
CTGTGGGGGCGACGGCGGTAGGACCGTCGATAGCCACCCTGCGTGAGCATCCGGAGCTGGTGGACAGGGCGGCGGCCCAG
GGCCGCGCGACATACTGCTGGACGGTGGATCACTACGAAGATGTCGAATTCTGCCGGAGCATCGGTGTCGCCTGGATCGC
CACCAACCACCCGGGCCGCACCAAGTCCTGGTTGCAGCGAGGGCTTACCGGTACCACGTTGTAA

Upstream 100 bases:

>100_bases
GTGCCGCTGGATGCCGACCGTCCGGACGTGCCGCCGACACGCGACGCCAATTCCGGCGCTGCGGTTGAACCAGTGGGCAC
GGAACCGGCAGCATTGGATC

Downstream 100 bases:

>100_bases
CCAAATTTCTCGCGCATTCGCTGTCGGTGCGGCACCGCGCGCTCATAATCACCACTGTGGGCGCCGGCGAGATGACGTTC
GGTCAGGAGTACCGATTCGC

Product: putative glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase 1 [H]

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MTESSEPGEDEAHARGADGIDGRGERHPFVVAHRGASADRPEHTLAAYELALEEGADGVECDVRLTRDGQLVCVHDRRVD
RTSDGTGLVSEMTLSQLRALDFGSWHPGGAEAETGTGLLTLEELVSLVLDWNRPVKLFIETKHPVRYGSLVENKVLALLH
RFGIAAPASADMSRAVVMSFSAAAVWRIRRAAPMLPTVLLGETSRYLGGSAATTVGATAVGPSIATLREHPELVDRAAAQ
GRATYCWTVDHYEDVEFCRSIGVAWIATNHPGRTKSWLQRGLTGTTL

Sequences:

>Translated_287_residues
MTESSEPGEDEAHARGADGIDGRGERHPFVVAHRGASADRPEHTLAAYELALEEGADGVECDVRLTRDGQLVCVHDRRVD
RTSDGTGLVSEMTLSQLRALDFGSWHPGGAEAETGTGLLTLEELVSLVLDWNRPVKLFIETKHPVRYGSLVENKVLALLH
RFGIAAPASADMSRAVVMSFSAAAVWRIRRAAPMLPTVLLGETSRYLGGSAATTVGATAVGPSIATLREHPELVDRAAAQ
GRATYCWTVDHYEDVEFCRSIGVAWIATNHPGRTKSWLQRGLTGTTL
>Mature_286_residues
TESSEPGEDEAHARGADGIDGRGERHPFVVAHRGASADRPEHTLAAYELALEEGADGVECDVRLTRDGQLVCVHDRRVDR
TSDGTGLVSEMTLSQLRALDFGSWHPGGAEAETGTGLLTLEELVSLVLDWNRPVKLFIETKHPVRYGSLVENKVLALLHR
FGIAAPASADMSRAVVMSFSAAAVWRIRRAAPMLPTVLLGETSRYLGGSAATTVGATAVGPSIATLREHPELVDRAAAQG
RATYCWTVDHYEDVEFCRSIGVAWIATNHPGRTKSWLQRGLTGTTL

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GDPD domain [H]

Homologues:

Organism=Homo sapiens, GI7706617, Length=160, Percent_Identity=34.375, Blast_Score=78, Evalue=1e-14,
Organism=Escherichia coli, GI1789858, Length=181, Percent_Identity=31.4917127071823, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1788572, Length=192, Percent_Identity=28.125, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 30962; Mature: 30831

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTESSEPGEDEAHARGADGIDGRGERHPFVVAHRGASADRPEHTLAAYELALEEGADGVE
CCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCE
CDVRLTRDGQLVCVHDRRVDRTSDGTGLVSEMTLSQLRALDFGSWHPGGAEAETGTGLLT
EEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
LEELVSLVLDWNRPVKLFIETKHPVRYGSLVENKVLALLHRFGIAAPASADMSRAVVMSF
HHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
SAAAVWRIRRAAPMLPTVLLGETSRYLGGSAATTVGATAVGPSIATLREHPELVDRAAAQ
HHHHHHHHHHHCCCCCCHHHCCCHHHCCCCHHHHCCHHHCCCHHHHHHHCHHHHHHHHHC
GRATYCWTVDHYEDVEFCRSIGVAWIATNHPGRTKSWLQRGLTGTTL
CCCEEEEECCCCHHHHHHHHCCEEEEEECCCCCCHHHHHCCCCCCCC
>Mature Secondary Structure 
TESSEPGEDEAHARGADGIDGRGERHPFVVAHRGASADRPEHTLAAYELALEEGADGVE
CCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCE
CDVRLTRDGQLVCVHDRRVDRTSDGTGLVSEMTLSQLRALDFGSWHPGGAEAETGTGLLT
EEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
LEELVSLVLDWNRPVKLFIETKHPVRYGSLVENKVLALLHRFGIAAPASADMSRAVVMSF
HHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
SAAAVWRIRRAAPMLPTVLLGETSRYLGGSAATTVGATAVGPSIATLREHPELVDRAAAQ
HHHHHHHHHHHCCCCCCHHHCCCHHHCCCCHHHHCCHHHCCCHHHHHHHCHHHHHHHHHC
GRATYCWTVDHYEDVEFCRSIGVAWIATNHPGRTKSWLQRGLTGTTL
CCCEEEEECCCCHHHHHHHHCCEEEEEECCCCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]