| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169627227
Identifier: 169627227
GI number: 169627227
Start: 120459
End: 121622
Strand: Direct
Name: 169627227
Synonym: MAB_0122
Alternate gene names: NA
Gene position: 120459-121622 (Clockwise)
Preceding gene: 169627226
Following gene: 169627228
Centisome position: 2.38
GC content: 67.01
Gene sequence:
>1164_bases ATGATCCAGGTGTGCTCCCGCTGCGGGACCCAGTGGAACGTGCGTGAGCAGCGTCGATACTGGTGCCCACGATGCCGGGG CACTCTGCTTGAGCCGGGCATGACCGCCCCGCCGCGGCCCGCCGCGTCCATGTCACGCCCGCCCGTCGGGGCACCCGCGC CCGCCGGCAAGTATTGGGTTCCGCCGACTCAGCAGGGCCCCGTGGCAACGCCTGCGGGACGTCCACAGGCGCGTCCCACC CGGCTGCCCGCGGGATATCGATGGATTGCCGTGCGTCCCGGATCGCCCCCGGCGCCGGCCCGCCGACGTCGTCCGCTCGG GCCGACGCCGCGCTACGCGTATATCCCTCGCTGGGGTCTGGTCGACCACATCGAGCCGACCGGATCGTCACGCCAAGGGA TAGCCGGGGGTGCTGTCCCCAGCCGGATACTCGACAGGCTCCTGCTGGCCACAATCATCACCCTGGCAATCACTTCATGT ACGCATTTTCTTCGATATGCGTTGATGGTCTACAACCGCGGTGCACTGATCCCGCGGTTCGTCGCCAGTGCGTCAAACGG GCTAGTCCTGATCAGCGTGGCGCTTGCCTTCGCGGTTATGGCGGCCACCGCGTGGTTCCTGACGGACTGGATGATCGCGC GCCGTGCAGAAACCTATCGTGACCTGGGGTTCGACGATCCGCGCAGCCCATGGGAGATTCGGGTGCTGTGCCTGCTACCG ATCGCGAACATCGTGGGTATACCGCTACTTCTCCTGGAGCTCGCCAAGATCGAGAACCGTTGGTATCGGCAGTACCGGAA CATTATGTGGTGGACGGTTCTGTGGGCGGCGACGTGGCTGCTGGCCCTGGTGACGTGGGTGGTCCGCGATTCGGTGACAG TGCAGGGCATCGCGGACAACGCGCTCTTCACGGCCATCGATTACGCGGTCGCGGCGGTCGCGGCCTGGAGGCTTCGTCGC GTGTACGAGGGCTTCACAGCACCGGAAGGACATCACCGCGCGGTGCGCTGGCTGGCGGTGGAATCCCCGCAGGGGCCGGT GCCGCTGGATGCCGACCGTCCGGACGTGCCGCCGACACGCGACGCCAATTCCGGCGCTGCGGTTGAACCAGTGGGCACGG AACCGGCAGCATTGGATCGTGACCGAGTCGTCGGAGCCTGGTGA
Upstream 100 bases:
>100_bases TAAGCCGACTATCAGCTGATTTCCTGGCGATCGGGCTCGTACGCGGGCTTCAGCGCACTACTCGCTGCCGGTTACTCCCG TAGGCCGTTACGCTGGACGA
Downstream 100 bases:
>100_bases GGATGAGGCCCATGCACGGGGAGCCGACGGTATAGACGGCAGGGGCGAACGCCATCCGTTCGTCGTCGCGCATCGGGGCG CGTCGGCGGACCGGCCCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MIQVCSRCGTQWNVREQRRYWCPRCRGTLLEPGMTAPPRPAASMSRPPVGAPAPAGKYWVPPTQQGPVATPAGRPQARPT RLPAGYRWIAVRPGSPPAPARRRRPLGPTPRYAYIPRWGLVDHIEPTGSSRQGIAGGAVPSRILDRLLLATIITLAITSC THFLRYALMVYNRGALIPRFVASASNGLVLISVALAFAVMAATAWFLTDWMIARRAETYRDLGFDDPRSPWEIRVLCLLP IANIVGIPLLLLELAKIENRWYRQYRNIMWWTVLWAATWLLALVTWVVRDSVTVQGIADNALFTAIDYAVAAVAAWRLRR VYEGFTAPEGHHRAVRWLAVESPQGPVPLDADRPDVPPTRDANSGAAVEPVGTEPAALDRDRVVGAW
Sequences:
>Translated_387_residues MIQVCSRCGTQWNVREQRRYWCPRCRGTLLEPGMTAPPRPAASMSRPPVGAPAPAGKYWVPPTQQGPVATPAGRPQARPT RLPAGYRWIAVRPGSPPAPARRRRPLGPTPRYAYIPRWGLVDHIEPTGSSRQGIAGGAVPSRILDRLLLATIITLAITSC THFLRYALMVYNRGALIPRFVASASNGLVLISVALAFAVMAATAWFLTDWMIARRAETYRDLGFDDPRSPWEIRVLCLLP IANIVGIPLLLLELAKIENRWYRQYRNIMWWTVLWAATWLLALVTWVVRDSVTVQGIADNALFTAIDYAVAAVAAWRLRR VYEGFTAPEGHHRAVRWLAVESPQGPVPLDADRPDVPPTRDANSGAAVEPVGTEPAALDRDRVVGAW >Mature_387_residues MIQVCSRCGTQWNVREQRRYWCPRCRGTLLEPGMTAPPRPAASMSRPPVGAPAPAGKYWVPPTQQGPVATPAGRPQARPT RLPAGYRWIAVRPGSPPAPARRRRPLGPTPRYAYIPRWGLVDHIEPTGSSRQGIAGGAVPSRILDRLLLATIITLAITSC THFLRYALMVYNRGALIPRFVASASNGLVLISVALAFAVMAATAWFLTDWMIARRAETYRDLGFDDPRSPWEIRVLCLLP IANIVGIPLLLLELAKIENRWYRQYRNIMWWTVLWAATWLLALVTWVVRDSVTVQGIADNALFTAIDYAVAAVAAWRLRR VYEGFTAPEGHHRAVRWLAVESPQGPVPLDADRPDVPPTRDANSGAAVEPVGTEPAALDRDRVVGAW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42863; Mature: 42863
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQVCSRCGTQWNVREQRRYWCPRCRGTLLEPGMTAPPRPAASMSRPPVGAPAPAGKYWV CCCCHHHCCCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPTQQGPVATPAGRPQARPTRLPAGYRWIAVRPGSPPAPARRRRPLGPTPRYAYIPRWGL CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHCCCCCCCCCEEECCCCCC VDHIEPTGSSRQGIAGGAVPSRILDRLLLATIITLAITSCTHFLRYALMVYNRGALIPRF CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH VASASNGLVLISVALAFAVMAATAWFLTDWMIARRAETYRDLGFDDPRSPWEIRVLCLLP HHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHH IANIVGIPLLLLELAKIENRWYRQYRNIMWWTVLWAATWLLALVTWVVRDSVTVQGIADN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC ALFTAIDYAVAAVAAWRLRRVYEGFTAPEGHHRAVRWLAVESPQGPVPLDADRPDVPPTR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCC DANSGAAVEPVGTEPAALDRDRVVGAW CCCCCCEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIQVCSRCGTQWNVREQRRYWCPRCRGTLLEPGMTAPPRPAASMSRPPVGAPAPAGKYWV CCCCHHHCCCCCCHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPTQQGPVATPAGRPQARPTRLPAGYRWIAVRPGSPPAPARRRRPLGPTPRYAYIPRWGL CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHCCCCCCCCCEEECCCCCC VDHIEPTGSSRQGIAGGAVPSRILDRLLLATIITLAITSCTHFLRYALMVYNRGALIPRF CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH VASASNGLVLISVALAFAVMAATAWFLTDWMIARRAETYRDLGFDDPRSPWEIRVLCLLP HHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHH IANIVGIPLLLLELAKIENRWYRQYRNIMWWTVLWAATWLLALVTWVVRDSVTVQGIADN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC ALFTAIDYAVAAVAAWRLRRVYEGFTAPEGHHRAVRWLAVESPQGPVPLDADRPDVPPTR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCC DANSGAAVEPVGTEPAALDRDRVVGAW CCCCCCEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA