| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627222
Identifier: 169627222
GI number: 169627222
Start: 117199
End: 117732
Strand: Reverse
Name: 169627222
Synonym: MAB_0117c
Alternate gene names: NA
Gene position: 117732-117199 (Counterclockwise)
Preceding gene: 169627223
Following gene: 169627220
Centisome position: 2.32
GC content: 64.04
Gene sequence:
>534_bases ATGGCGACCAGTTCCGATCAGCCGATCGAGATCGCGCCCTTCCATGCGGGCGGATCACTCAGAGGGTTTGTGGTGTGCGG CCGGTGGCCTGATTCCACGAAGGAATGGATGCAGCTGCTGATCGTGACGGTACGCATCGCCACCCTGCCCGGATTACTCT CCACCACAACGATTTTTGGCGCCCGTGAAGACCTACCGGACGACCCGGCACCCGGCATGGTGGGCTTGGTCATCGCCGAA GGCACGGTCCTTGGTGAATCGGCAGTCGCCCCTGGGCGTTTCGCAGAGCATCAGCCGCCGGCGCTGCTCATGCTCCACCC TCCGTCGGAAACCAATCCGACACTGCCGGAATGCCTAGGCGCGGCGTCCGGTTGCCTCCTCCTACCCGGAATACCGCATC TGGGCTTGGACCATCGGGCCGCCTGGGTGGAGGCAGAGTCGGACGGCACGGTCACTTCGGTGGTGAGCCGGGTCGGTATC GATCCCATCAGCGACCCGGACACGGCAGTATTGGCAATGCTGCTTGCCGCATAG
Upstream 100 bases:
>100_bases CGCTAGCGATTGCGGGGTGATTCCGCGCATGGTAATTCTGAAGTAAGCAGCGTCGCGCAATACTGGTAGTGATGTCAGAG TGATTGTGAGCGTGGCAGAT
Downstream 100 bases:
>100_bases CGGTTTTGAGATCCCGGGCCACCATGCGGCGCGGTACACACACGGCGCCTTGGTCCGTGGGCAGCACCAGGACAGGGTCC GCCAGCAACTACCACATCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MATSSDQPIEIAPFHAGGSLRGFVVCGRWPDSTKEWMQLLIVTVRIATLPGLLSTTTIFGAREDLPDDPAPGMVGLVIAE GTVLGESAVAPGRFAEHQPPALLMLHPPSETNPTLPECLGAASGCLLLPGIPHLGLDHRAAWVEAESDGTVTSVVSRVGI DPISDPDTAVLAMLLAA
Sequences:
>Translated_177_residues MATSSDQPIEIAPFHAGGSLRGFVVCGRWPDSTKEWMQLLIVTVRIATLPGLLSTTTIFGAREDLPDDPAPGMVGLVIAE GTVLGESAVAPGRFAEHQPPALLMLHPPSETNPTLPECLGAASGCLLLPGIPHLGLDHRAAWVEAESDGTVTSVVSRVGI DPISDPDTAVLAMLLAA >Mature_176_residues ATSSDQPIEIAPFHAGGSLRGFVVCGRWPDSTKEWMQLLIVTVRIATLPGLLSTTTIFGAREDLPDDPAPGMVGLVIAEG TVLGESAVAPGRFAEHQPPALLMLHPPSETNPTLPECLGAASGCLLLPGIPHLGLDHRAAWVEAESDGTVTSVVSRVGID PISDPDTAVLAMLLAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18373; Mature: 18242
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSSDQPIEIAPFHAGGSLRGFVVCGRWPDSTKEWMQLLIVTVRIATLPGLLSTTTIFG CCCCCCCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCC AREDLPDDPAPGMVGLVIAEGTVLGESAVAPGRFAEHQPPALLMLHPPSETNPTLPECLG CCCCCCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHC AASGCLLLPGIPHLGLDHRAAWVEAESDGTVTSVVSRVGIDPISDPDTAVLAMLLAA CCCCEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure ATSSDQPIEIAPFHAGGSLRGFVVCGRWPDSTKEWMQLLIVTVRIATLPGLLSTTTIFG CCCCCCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCC AREDLPDDPAPGMVGLVIAEGTVLGESAVAPGRFAEHQPPALLMLHPPSETNPTLPECLG CCCCCCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHC AASGCLLLPGIPHLGLDHRAAWVEAESDGTVTSVVSRVGIDPISDPDTAVLAMLLAA CCCCEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA