Click here to switch to the map view.

The map label for this gene is xyoA [H]

Identifier: 169627210

GI number: 169627210

Start: 106396

End: 107634

Strand: Reverse

Name: xyoA [H]

Synonym: MAB_0105c

Alternate gene names: 169627210

Gene position: 107634-106396 (Counterclockwise)

Preceding gene: 169627211

Following gene: 169627199

Centisome position: 2.12

GC content: 63.76

Gene sequence:

>1239_bases
ATGCTGGTGCGTCCCCGGTCTGAAGATGAACTGGCGTTCGCGCTGAGACGTTCGGCCGGGCGCACCGTGCGACCGATCGG
CTCCTCGCATTCCTTTACCCAACTGTGCGTCACCGAGGATGTGCAGATTGATGTCTCCGAAATGCGGCGACTGATATCGA
TAGACGCTCAGGACCGGGTGCGGGTGCAAGCCGGAATCAGCCTCCACGAACTGAACCGCACGTTGTTGCGGCACGGGCTG
GCGCTGCCCAACCTCGGCGACATCGACGTCCAGACACTGGCCGGGGCGGCCGCGACCGGCACCCATGGGACCGGCCTGAA
GTTCGGCAACATCTCCCAGACCATCCTCTCGATGCGCATCATGACCGCCGACGGCACTATTCATGAGCTCGACGACGGCG
ATGCGCTGCGCGCCGCGCGGATATCACTGGGTGCACTCGGCGTGGTCACCGAGTTCACCTTGCAATGCGTCCCGGCCTTC
CGGCTGCACCGCAGCCAGTCCGTTCACGACCTTGATACCGTACTGGCCGACCTCCCCACGTTGCTGGCGGACACCGATCA
TCTTGAGCTGTATCTGTTTCCACACACGCGTCGGGTACTGCTGCTGCAATCCACCCGGACCGACGAGGCGCCATGGCCAC
GCAATCCGGTCAAACACTGGGTGGAACGCGACCTGGTGGAAAACGGGGCACTCGGCGCGTTGATGTGGACGGCCGGCCGC
CTACCCGCTGCCGCCCCTCGGATATCCAAACTTGTTGCAGCGCTGGCTAGTTCCAATGAGTCGCAGGATGAAAGCGCGGC
GGTGTTCGCGAGCCCACGCAAGGTGAAGTTCACCGAGATGGAGTATTCGCTCCCGCTGACCAACGCCCGTGAGGCGATCG
AGACCGCACTGGCCACCATCGAACGAGATCGCCATCAGGTGGCTTTCCCCCTGGAGGTCCGTTTTACCCAGGCCGACGAC
GCGCTGCTCGCACCGGCTTATGGCCGCGAAAGTGTGTATCTCGCTGTGCACCAAACGGTGCACGGTTCATGGGAGTCCTA
CTTCGGCGGCCTCGAGCCCATCCTGATCGGCTTGGGCGGTCGGCCGCATTGGGGCAAGCGGCACACGTTGACGGCCCAAC
AGTTAAGTGAGCGCTACCCCGAATGGGGCACGTTCCAGGACATCCGTGCACGGCTTGACCCTGGGGGTACGTTCAGCGGC
GGATATCTGAACCGGCTGCTCGGGCCGGTCAGCCCCTGA

Upstream 100 bases:

>100_bases
GACAGCACGCCGGATCGGTGTCGACGTATCGCGGCGAGGGAATGATGTTTCTGTGAGCGAATGGCGCAACTGGAGCGGTC
AAACATCTTGTGCCCCAGCT

Downstream 100 bases:

>100_bases
ACCAGGGCGGTGGCACCGGTACTGCGGCACGGTCCGGCTCGATCGGCGGGCGCCTCGCACCGGCATTTTCTCCGCCCTGG
GCGAAGTCGACGGGCCAGTC

Product: oxidoreductase

Products: NA

Alternate protein names: Alditol oxidase [H]

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MLVRPRSEDELAFALRRSAGRTVRPIGSSHSFTQLCVTEDVQIDVSEMRRLISIDAQDRVRVQAGISLHELNRTLLRHGL
ALPNLGDIDVQTLAGAAATGTHGTGLKFGNISQTILSMRIMTADGTIHELDDGDALRAARISLGALGVVTEFTLQCVPAF
RLHRSQSVHDLDTVLADLPTLLADTDHLELYLFPHTRRVLLLQSTRTDEAPWPRNPVKHWVERDLVENGALGALMWTAGR
LPAAAPRISKLVAALASSNESQDESAAVFASPRKVKFTEMEYSLPLTNAREAIETALATIERDRHQVAFPLEVRFTQADD
ALLAPAYGRESVYLAVHQTVHGSWESYFGGLEPILIGLGGRPHWGKRHTLTAQQLSERYPEWGTFQDIRARLDPGGTFSG
GYLNRLLGPVSP

Sequences:

>Translated_412_residues
MLVRPRSEDELAFALRRSAGRTVRPIGSSHSFTQLCVTEDVQIDVSEMRRLISIDAQDRVRVQAGISLHELNRTLLRHGL
ALPNLGDIDVQTLAGAAATGTHGTGLKFGNISQTILSMRIMTADGTIHELDDGDALRAARISLGALGVVTEFTLQCVPAF
RLHRSQSVHDLDTVLADLPTLLADTDHLELYLFPHTRRVLLLQSTRTDEAPWPRNPVKHWVERDLVENGALGALMWTAGR
LPAAAPRISKLVAALASSNESQDESAAVFASPRKVKFTEMEYSLPLTNAREAIETALATIERDRHQVAFPLEVRFTQADD
ALLAPAYGRESVYLAVHQTVHGSWESYFGGLEPILIGLGGRPHWGKRHTLTAQQLSERYPEWGTFQDIRARLDPGGTFSG
GYLNRLLGPVSP
>Mature_412_residues
MLVRPRSEDELAFALRRSAGRTVRPIGSSHSFTQLCVTEDVQIDVSEMRRLISIDAQDRVRVQAGISLHELNRTLLRHGL
ALPNLGDIDVQTLAGAAATGTHGTGLKFGNISQTILSMRIMTADGTIHELDDGDALRAARISLGALGVVTEFTLQCVPAF
RLHRSQSVHDLDTVLADLPTLLADTDHLELYLFPHTRRVLLLQSTRTDEAPWPRNPVKHWVERDLVENGALGALMWTAGR
LPAAAPRISKLVAALASSNESQDESAAVFASPRKVKFTEMEYSLPLTNAREAIETALATIERDRHQVAFPLEVRFTQADD
ALLAPAYGRESVYLAVHQTVHGSWESYFGGLEPILIGLGGRPHWGKRHTLTAQQLSERYPEWGTFQDIRARLDPGGTFSG
GYLNRLLGPVSP

Specific function: Catalyzes the oxidation of xylitol to xylose, also acts on D-sorbitol [H]

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323553, Length=487, Percent_Identity=22.7926078028747, Blast_Score=121, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007173
- InterPro:   IPR016166
- InterPro:   IPR016168
- InterPro:   IPR006094 [H]

Pfam domain/function: PF04030 ALO; PF01565 FAD_binding_4 [H]

EC number: =1.1.3.41 [H]

Molecular weight: Translated: 45318; Mature: 45318

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS00435 PEROXIDASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVRPRSEDELAFALRRSAGRTVRPIGSSHSFTQLCVTEDVQIDVSEMRRLISIDAQDRV
CCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCEEEEECCCCEECHHHHHHHHCCCCCCCE
RVQAGISLHELNRTLLRHGLALPNLGDIDVQTLAGAAATGTHGTGLKFGNISQTILSMRI
EEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEECCHHHHHHEEEE
MTADGTIHELDDGDALRAARISLGALGVVTEFTLQCVPAFRLHRSQSVHDLDTVLADLPT
EECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LLADTDHLELYLFPHTRRVLLLQSTRTDEAPWPRNPVKHWVERDLVENGALGALMWTAGR
HHCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHCCCC
LPAAAPRISKLVAALASSNESQDESAAVFASPRKVKFTEMEYSLPLTNAREAIETALATI
CCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEEEEEECCCCHHHHHHHHHHHHH
ERDRHQVAFPLEVRFTQADDALLAPAYGRESVYLAVHQTVHGSWESYFGGLEPILIGLGG
HHCCCEEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEHHCCCHHHHHCCCCEEEEECCC
RPHWGKRHTLTAQQLSERYPEWGTFQDIRARLDPGGTFSGGYLNRLLGPVSP
CCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHCCCCCC
>Mature Secondary Structure
MLVRPRSEDELAFALRRSAGRTVRPIGSSHSFTQLCVTEDVQIDVSEMRRLISIDAQDRV
CCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCEEEEECCCCEECHHHHHHHHCCCCCCCE
RVQAGISLHELNRTLLRHGLALPNLGDIDVQTLAGAAATGTHGTGLKFGNISQTILSMRI
EEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEECCHHHHHHEEEE
MTADGTIHELDDGDALRAARISLGALGVVTEFTLQCVPAFRLHRSQSVHDLDTVLADLPT
EECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LLADTDHLELYLFPHTRRVLLLQSTRTDEAPWPRNPVKHWVERDLVENGALGALMWTAGR
HHCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHCCCC
LPAAAPRISKLVAALASSNESQDESAAVFASPRKVKFTEMEYSLPLTNAREAIETALATI
CCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEEEEEECCCCHHHHHHHHHHHHH
ERDRHQVAFPLEVRFTQADDALLAPAYGRESVYLAVHQTVHGSWESYFGGLEPILIGLGG
HHCCCEEEEEEEEEEECCCCCEECCCCCCCEEEEEEEEHHCCCHHHHHCCCCEEEEECCC
RPHWGKRHTLTAQQLSERYPEWGTFQDIRARLDPGGTFSGGYLNRLLGPVSP
CCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]